BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0015.0450.p (204 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value mll3011 [K] COG0583 Transcriptional regulator Mlo Mesorhizobium ... 183 2e-46 slr1245 [K] COG0583 Transcriptional regulator Syn Synechocystis 148 7e-36 SMc00831 [K] COG0583 Transcriptional regulator Sme Sinorhizobium... 130 3e-30 RSp0910 [K] COG0583 Transcriptional regulator Rso Ralstonia sola... 129 6e-30 mlr1930 [K] COG0583 Transcriptional regulator Mlo Mesorhizobium ... 127 2e-29 >mll3011 [K] COG0583 Transcriptional regulator Mlo Mesorhizobium loti Length = 292 Score = 183 bits (465), Expect = 2e-46, Method: Compositional matrix adjust. Identities = 92/195 (47%), Positives = 127/195 (65%), Gaps = 2/195 (1%) Query: 1 LRVSAAPTFARLFVIPFLPLFLARHPALEVDVILDDRTIDLVAEGIDVSLRMGNLADSAS 60 LR+ + TF RL V+P L FL HP L+V+V +DDR +DLV EG+DV LR+G A Sbjct: 94 LRIGTSVTFGRLHVVPRLKAFLDAHPRLDVEVAMDDRNVDLVEEGVDVMLRLGESFAPAH 153 Query: 61 VARKLATTRRSVLATRAYLERVPAPRVPADLARHETLVLSQLDNV--WTFTRASTAVSVM 118 + RK+A RR V+A +YL R P P +L+RHE ++ + WTF R + VS+ Sbjct: 154 IGRKIAACRRLVVAAPSYLAREGEPIAPDELSRHEAILFVRAGTSIRWTFRRGAEEVSLA 213 Query: 119 VQGRVRFNAAEGIRAAVLADMGLAIASDWMFAPELAAGSVVRVLEKWTLPDIALWAVFPT 178 QGR+R +AEGIR AVL+ +G + S+WMF EL +G+V +L +WTLP + LWA+FP Sbjct: 214 GQGRLRVTSAEGIREAVLSGIGFTVGSEWMFDAELRSGAVRPILTEWTLPPVELWALFPA 273 Query: 179 GRLASAKARAFADFV 193 GR ASA+AR F +F+ Sbjct: 274 GRKASARARTFVEFL 288 >slr1245 [K] COG0583 Transcriptional regulator Syn Synechocystis Length = 302 Score = 148 bits (374), Expect = 7e-36, Method: Compositional matrix adjust. Identities = 66/197 (33%), Positives = 120/197 (60%), Gaps = 2/197 (1%) Query: 1 LRVSAAPTFARLFVIPFLPLFLARHPALEVDVILDDRTIDLVAEGIDVSLRMGNLADSAS 60 LR+ + F + ++P L LF+AR+P +++D+++ D +D+V EG+D+++R+GN D A Sbjct: 93 LRLGCSVLFGEMQIVPRLSLFIARYPQVKIDLMMADYFVDMVQEGLDLAIRIGNHQDKAL 152 Query: 61 VARKLATTRRSVLATRAYLERVPAPRVPADLARHETLVLSQLD--NVWTFTRASTAVSVM 118 ++ ++ TRR +A+ +Y E+ P+ P +L RH +V + L N W F + +++ Sbjct: 153 ISERIGITRRVTVASTSYFEKSGEPKTPEELTRHNCIVYTSLSTINEWHFHGKNGVIAIN 212 Query: 119 VQGRVRFNAAEGIRAAVLADMGLAIASDWMFAPELAAGSVVRVLEKWTLPDIALWAVFPT 178 V+G + N++ +RAAVL+D+G+AIA WMF ++ G++ VL+ + ++AV+ Sbjct: 213 VKGSFQTNSSVAVRAAVLSDLGIAIAPIWMFGDDIYQGNLKVVLQDYQPVPFPIYAVYRR 272 Query: 179 GRLASAKARAFADFVEE 195 R AK F DF+ E Sbjct: 273 SRFYPAKVHCFIDFLRE 289 >SMc00831 [K] COG0583 Transcriptional regulator Sme Sinorhizobium meliloti Length = 298 Score = 130 bits (326), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 74/194 (38%), Positives = 113/194 (58%), Gaps = 2/194 (1%) Query: 1 LRVSAAPTFARLFVIPFLPLFLARHPALEVDVILDDRTIDLVAEGIDVSLRMGNLADSAS 60 LR+SA +F R+ + P L F+ HP L++ ++L D D+VAEG D+++R+G L+DS+ Sbjct: 94 LRISAPTSFGRMHIAPHLTGFMKDHPDLKLHIVLTDDFTDIVAEGFDLAIRIGELSDSSL 153 Query: 61 VARKLATTRRSVLATRAYLERVPAPRVPADLARHETLVLSQLDNVWTFTRASTAVSVMVQ 120 VARKLA RR + A +Y+ R AP +LA+H L DN W ++S + Sbjct: 154 VARKLAPVRRLLCAAPSYVARHGAPTEIGELAKHICLPAHNNDN-WKLEGPDGSLSYRPE 212 Query: 121 GRVRFNAAEGIRAAVLADMGLAIASDWMFAPELAAGSVVRVLEKWTLPD-IALWAVFPTG 179 G + N++E IR AV+A G+A+ S W EL G +V+VL +W + L AV+P+ Sbjct: 213 GPLVTNSSEIIREAVIAGAGIALRSTWDIGRELREGRLVQVLPQWEGSHKLTLSAVYPSR 272 Query: 180 RLASAKARAFADFV 193 + AK R F D++ Sbjct: 273 QFLPAKVRQFIDYL 286 >RSp0910 [K] COG0583 Transcriptional regulator Rso Ralstonia solanacearum Length = 309 Score = 129 bits (323), Expect = 6e-30, Method: Compositional matrix adjust. Identities = 77/203 (37%), Positives = 107/203 (52%), Gaps = 8/203 (3%) Query: 1 LRVSAAPTFARLFVIPFLPLFLARHPALEVDVILDDRTIDLVAEGIDVSLRMGNLADSAS 60 LRV+ F RL V P +P FL R P + +D+ L D ++LV + IDV++R+G L Sbjct: 94 LRVTMPVAFGRLHVAPAIPAFLRRFPGMRLDIRLTDAMVNLVEDRIDVAIRLGALTAPNL 153 Query: 61 VARKLATTRRSVLATRAYLERVPAPRVPADLARHETLVLSQL--DNVWTFTRASTAVSVM 118 VARKLA RR + A+ YL P P DLA H L+ L D+ WT TR V Sbjct: 154 VARKLAPHRRVICASPDYLGEHGTPAQPRDLAHHNCLLFDYLTGDSTWTLTRDGKREKVP 213 Query: 119 VQGRVRFNAAEGIRAAVLADMGLAIASDWMFAPELAAGSVVRVLEKWT------LPDIAL 172 V G +R N +E +R A + G+ + W+ ++AAG +V VLE WT + A+ Sbjct: 214 VSGNLRANGSELLREAAMGGAGMLLMPTWLVGDDIAAGRLVPVLEPWTPTPGADEGESAI 273 Query: 173 WAVFPTGRLASAKARAFADFVEE 195 WAV+ R S K F DF+ + Sbjct: 274 WAVYLPNRRGSKKLAGFLDFLAQ 296 >mlr1930 [K] COG0583 Transcriptional regulator Mlo Mesorhizobium loti Length = 297 Score = 127 bits (318), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 79/199 (39%), Positives = 112/199 (56%), Gaps = 4/199 (2%) Query: 1 LRVSAAPTFARLFVIPFLPLFLARHPALEVDVILDDRTIDLVAEGIDVSLRMGNLADSAS 60 LR++ TF R+++ P LP FLA P + ++ +R DLVAE DV++R+G L DS Sbjct: 89 LRLALPGTFGRMWIGPLLPQFLAEFPDIRIEAEFSNRFADLVAENFDVAVRLGALEDSRL 148 Query: 61 VARKLATTRRSVLATRAYLERVPAPRVPADLARHETLVLSQLDN--VWTFT-RASTAVSV 117 VARK+AT RR + A AYL R P P L H L S W T R V Sbjct: 149 VARKVATRRRLLCAAPAYLARRGRPDTPQALLEHSCLGFSGFQTFPAWEMTDREGRRARV 208 Query: 118 MVQGRVRFNAAEGIRAAVLADMGLAIASDWMFAPELAAGSVVRVLEKWTLPDI-ALWAVF 176 V G + + AE + A + +GL +++DW+ ELA G +V VLE+WTL D A++ V Sbjct: 209 EVSGPLVSDDAEVLVEAAVQGLGLMMSTDWLIGRELADGRLVPVLEEWTLADEGAVYVVL 268 Query: 177 PTGRLASAKARAFADFVEE 195 P+ + +AK RAFAD++ + Sbjct: 269 PSAKGQAAKTRAFADWISK 287