BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0015.0431.p         (143 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

FN1406 [E] COG2986 Histidine ammonia-lyase Fnu Fusobacterium nuc...   119   1e-27
Ta0242 [E] COG2986 Histidine ammonia-lyase Tac Thermoplasma acid...   108   3e-24
FN0791 [E] COG2986 Histidine ammonia-lyase Fnu Fusobacterium nuc...   105   2e-23
BS_hutH [E] COG2986 Histidine ammonia-lyase Bsu Bacillus subtilis     102   2e-22
RSc2646 [E] COG2986 Histidine ammonia-lyase Rso Ralstonia solana...   102   3e-22

>FN1406 [E] COG2986 Histidine ammonia-lyase Fnu Fusobacterium nucleatum
          Length = 511

 Score =  119 bits (299), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 64/130 (49%), Positives = 76/130 (58%), Gaps = 19/130 (14%)

Query: 10  AFDPRIQQARPHAGQIKTAEVIRNLLKGSTRTTHEARAIQLPDELRRTDIPYTARIQDVY 69
           AFD RI   RPH GQI +AE +R LLKGS RTT +                   R+QD Y
Sbjct: 237 AFDERIHLIRPHKGQIYSAENLRKLLKGSKRTTRQGEK----------------RMQDAY 280

Query: 70  SLRCAPQVYGPVFDALDYIDTIIEKETNSATDNPLIFNKEDGEGFEIISGGNFHGQYLAQ 129
           SLRC PQV+G    A DY+   +E E NS TDNPLIF  E+G     ISGGNFHGQ +A 
Sbjct: 281 SLRCTPQVHGASRLAFDYVKQTVETEINSVTDNPLIFPGENG---ACISGGNFHGQPIAI 337

Query: 130 AMDLLAMAIA 139
           AMD L + ++
Sbjct: 338 AMDTLGILMS 347


>Ta0242 [E] COG2986 Histidine ammonia-lyase Tac Thermoplasma acidophilum
          Length = 496

 Score =  108 bits (270), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 58/129 (44%), Positives = 76/129 (58%), Gaps = 22/129 (17%)

Query: 10  AFDPRIQQARPHAGQIKTAEVIRNLLKGSTRTTHEARAIQLPDELRRTDIPYTARIQDVY 69
           AF P I  ARPH GQ+      R  L GS             D ++R D   + ++QD Y
Sbjct: 234 AFTPWILGARPHLGQVAIGNRFREYLTGS-------------DIVKRAD---SVKVQDAY 277

Query: 70  SLRCAPQVYGPVFDALDYIDTIIEKETNSATDNPLIFNKEDGEGFEIISGGNFHGQYLAQ 129
           +LRC PQVYG V D +DY++ ++  E NSATDNPL FN E     E++SGGNFHG+ +A 
Sbjct: 278 TLRCIPQVYGSVADVIDYVENVLSVEINSATDNPL-FNGE-----EVVSGGNFHGEPVAL 331

Query: 130 AMDLLAMAI 138
           A D LA+A+
Sbjct: 332 AADFLAIAL 340


>FN0791 [E] COG2986 Histidine ammonia-lyase Fnu Fusobacterium nucleatum
          Length = 516

 Score =  105 bits (263), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 55/130 (42%), Positives = 74/130 (56%), Gaps = 20/130 (15%)

Query: 10  AFDPRIQQARPHAGQIKTAEVIRNLLKGSTRTTHEARAIQLPDELRRTDIPYTARIQDVY 69
           A+DPRI + R H GQI TA+ +RN+L GS   T +                   R+QD Y
Sbjct: 241 AYDPRIGEVRGHLGQINTAKNMRNILAGSKNVTKQG----------------VERVQDSY 284

Query: 70  SLRCAPQVYGPVFDALDYIDTIIEKETNSATDNPLIFNKEDGEGFEIISGGNFHGQYLAQ 129
            LRC PQ++G   D L+Y+   +E E N+ TDNP+IF   D    E+ISGGNFHGQ +A 
Sbjct: 285 VLRCIPQIHGASKDTLEYVKQKVELELNAVTDNPIIFVDTD----EVISGGNFHGQPMAL 340

Query: 130 AMDLLAMAIA 139
             D L +A++
Sbjct: 341 PFDFLGIALS 350


>BS_hutH [E] COG2986 Histidine ammonia-lyase Bsu Bacillus subtilis
          Length = 508

 Score =  102 bits (255), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 61/130 (46%), Positives = 75/130 (57%), Gaps = 20/130 (15%)

Query: 10  AFDPRIQQARPHAGQIKTAEVIRNLLKGSTRTTHEARAIQLPDELRRTDIPYTARIQDVY 69
           AFD  I  AR +  QI  AE IR  L  S  TT +        ELR         +QD Y
Sbjct: 234 AFDEDIHLARGYQEQIDVAERIRFYLSDSGLTTSQG-------ELR---------VQDAY 277

Query: 70  SLRCAPQVYGPVFDALDYIDTIIEKETNSATDNPLIFNKEDGEGFEIISGGNFHGQYLAQ 129
           SLRC PQV+G  +  L Y+   +E E N+ATDNPLIFN    +G ++ISGGNFHGQ +A 
Sbjct: 278 SLRCIPQVHGATWQTLGYVKEKLEIEMNAATDNPLIFN----DGDKVISGGNFHGQPIAF 333

Query: 130 AMDLLAMAIA 139
           AMD L +AI+
Sbjct: 334 AMDFLKIAIS 343


>RSc2646 [E] COG2986 Histidine ammonia-lyase Rso Ralstonia solanacearum
          Length = 518

 Score =  102 bits (253), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 56/131 (42%), Positives = 72/131 (54%), Gaps = 18/131 (13%)

Query: 9   AAFDPRIQQARPHAGQIKTAEVIRNLLKGSTRTTHEARAIQLPDELRRTDIPYTARIQDV 68
           A FDPR+   R  AGQI TA V R LL GS               +RR+ +    R+QD 
Sbjct: 241 APFDPRVHTVRGQAGQIATAAVYRGLLAGSA--------------IRRSHLVGDTRVQDP 286

Query: 69  YSLRCAPQVYGPVFDALDYIDTIIEKETNSATDNPLIFNKEDGEGFEIISGGNFHGQYLA 128
           YSLRC PQV G   D +      +  E N+ TDNPL++     +  E+ISGGNFH + +A
Sbjct: 287 YSLRCQPQVMGACLDLIRQAGATLLTEANAVTDNPLVY----ADAGEVISGGNFHAEPVA 342

Query: 129 QAMDLLAMAIA 139
            A D+LA+AIA
Sbjct: 343 FAADMLALAIA 353