BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0015.0430.p         (212 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BS_hutH [E] COG2986 Histidine ammonia-lyase Bsu Bacillus subtilis      85   1e-16
BH1982 [E] COG2986 Histidine ammonia-lyase Bha Bacillus halodurans     84   3e-16
FN1406 [E] COG2986 Histidine ammonia-lyase Fnu Fusobacterium nuc...    81   2e-15
BMEII0368_2 [E] COG2986 Histidine ammonia-lyase Bme Brucella mel...    75   7e-14
SMb21165 [E] COG2986 Histidine ammonia-lyase Sme Sinorhizobium m...    74   2e-13

>BS_hutH [E] COG2986 Histidine ammonia-lyase Bsu Bacillus subtilis
          Length = 508

 Score = 85.1 bits (209), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 41/82 (50%), Positives = 63/82 (76%), Gaps = 4/82 (4%)

Query: 69  EVVDRLLAFINAGIHPIMPQKGSVGASGDLAPLAYLAAAIAGFDEAEVMYQGQRMRATQA 128
           E++++LLAF+N  +HP++PQ+GS+GASGDLAPL++LA A+ G  + EV ++G+RM A   
Sbjct: 116 ELIEQLLAFLNKRVHPVIPQQGSLGASGDLAPLSHLALALIG--QGEVFFEGERMPAMTG 173

Query: 129 IEQAGIGPVKFDLKAKDASALI 150
           +++AGI PV   L +K+  ALI
Sbjct: 174 LKKAGIQPVT--LTSKEGLALI 193


>BH1982 [E] COG2986 Histidine ammonia-lyase Bha Bacillus halodurans
          Length = 511

 Score = 83.6 bits (205), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 41/81 (50%), Positives = 60/81 (74%), Gaps = 4/81 (4%)

Query: 70  VVDRLLAFINAGIHPIMPQKGSVGASGDLAPLAYLAAAIAGFDEAEVMYQGQRMRATQAI 129
           V++RLLA +NA IHP++PQ+GS+GASGDLAPL++LA  + G  E EV Y+G + +A+ A+
Sbjct: 120 VIERLLALVNANIHPVIPQQGSLGASGDLAPLSHLALVLLG--EGEVFYKGTKTKASFAL 177

Query: 130 EQAGIGPVKFDLKAKDASALI 150
           ++  I P+   L AK+  ALI
Sbjct: 178 KEEEIEPIT--LTAKEGLALI 196


>FN1406 [E] COG2986 Histidine ammonia-lyase Fnu Fusobacterium nucleatum
          Length = 511

 Score = 81.3 bits (199), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 62/212 (29%), Positives = 98/212 (46%), Gaps = 55/212 (25%)

Query: 4   ITIDGFNLTAAQVVSVARAPHLKVALADSSRAALKQSRDYIESTWMHD------------ 51
           I I+G NLT   VV+VAR    KV L +  +  + +SR Y+E    +             
Sbjct: 5   IEINGSNLTIEDVVAVARYG-AKVKLDEKQKDKILESRKYVEEALSNKMPIYGINTGFGK 63

Query: 52  --------------EAPMMYSFNTGVGL------------------------LXVEVVDR 73
                         +  ++YS   GVG                         + +E V+ 
Sbjct: 64  FENVPISEEELELLQKNLIYSDACGVGEAFDTEIVRAMMILRANAISKGFSGVMIETVEC 123

Query: 74  LLAFINAGIHPIMPQKGSVGASGDLAPLAYLAAAIAGFDEAEVMYQGQRMRATQAIEQAG 133
           LL  +NAG+HPI+  KGSVG+SGDL PLA++   + G  EAE  Y+G+ +   +A+++AG
Sbjct: 124 LLNMLNAGVHPIVRSKGSVGSSGDLCPLAHMVLPMIGEGEAE--YKGEILSGKEAMKKAG 181

Query: 134 IGPVKFDLKAKDASALIACWPSSMRASIRSXW 165
           +  +   LKAK+  ALI    + M  ++ + +
Sbjct: 182 VSTIT--LKAKEGLALINGTQAMMGNAVLAVY 211


>BMEII0368_2 [E] COG2986 Histidine ammonia-lyase Bme Brucella melitensis
          Length = 309

 Score = 75.5 bits (184), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 42/111 (37%), Positives = 68/111 (61%), Gaps = 4/111 (3%)

Query: 56  MYSFNTGVGLLXVEVVDRLLAFINAGIHPIMPQKGSVGASGDLAPLAYLAAAIAGFDEAE 115
           + S   G   + +EV+  + A +  G+ P++P+KGSVGASGDLAPLA++ AA+ G  E E
Sbjct: 104 LVSLGRGASGVQLEVITLIEAMLEKGVIPMIPEKGSVGASGDLAPLAHMTAAMIG--EGE 161

Query: 116 VMYQGQRMRATQAIEQAGIGPVKFDLKAKDASALIACWPSSMRASIRSXWK 166
             Y+G+R+   +A+ +AG+ PV   L AK+  ALI    +S   ++   ++
Sbjct: 162 AFYRGERLSGAKALGKAGLKPVV--LAAKEGLALINGTQTSTALALAGLFR 210


>SMb21165 [E] COG2986 Histidine ammonia-lyase Sme Sinorhizobium meliloti
          Length = 511

 Score = 73.9 bits (180), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 41/95 (43%), Positives = 62/95 (65%), Gaps = 4/95 (4%)

Query: 56  MYSFNTGVGLLXVEVVDRLLAFINAGIHPIMPQKGSVGASGDLAPLAYLAAAIAGFDEAE 115
           + S   G   + +E+V  + A ++ G+ P++P+KGSVGASGDLAPLA++AA + G  EA 
Sbjct: 104 LISLGRGASGVRLELVRLIEAMLDKGVIPLIPEKGSVGASGDLAPLAHMAAVMMGHGEA- 162

Query: 116 VMYQGQRMRATQAIEQAGIGPVKFDLKAKDASALI 150
             + G+RM+   A++ AG+ PV   L AK+  ALI
Sbjct: 163 -FFAGERMKGDAALKAAGLSPVT--LAAKEGLALI 194