BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0015.0410.p (435 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SMc02873 [G] COG1653 ABC-type sugar transport system, periplasmi... 478 e-134 mlr4771 [G] COG1653 ABC-type sugar transport system, periplasmic... 458 e-128 VCA1033 [G] COG1653 ABC-type sugar transport system, periplasmic... 426 e-119 BMEII0754 [G] COG1653 ABC-type sugar transport system, periplasm... 273 6e-73 BMEII0755 [G] COG1653 ABC-type sugar transport system, periplasm... 166 1e-40 >SMc02873 [G] COG1653 ABC-type sugar transport system, periplasmic component Sme Sinorhizobium meliloti Length = 419 Score = 478 bits (1229), Expect = e-134, Method: Compositional matrix adjust. Identities = 231/412 (56%), Positives = 293/412 (71%), Gaps = 6/412 (1%) Query: 24 LLAACALAFGLTGLAAAPGQAGTLTIESWRVDDLPLWQEVLIPAFQRSNPGITVKFSPTA 83 LLA+ L G GLA A Q TLTIESWR DDL +WQE LIPAF+ NPGI V F+P+A Sbjct: 10 LLASSIL--GSAGLAQA--QDATLTIESWRNDDLAIWQEKLIPAFEAKNPGIKVVFAPSA 65 Query: 84 PTEYDSSLAARMAGGTAGDLVACRPFDVSLSLYNKGHLEKLDGKPGMEFFAPAAKAAWQT 143 PTEY+++L A++ G+AGDL+ CRPFD SL LYNK HL L G GME F+ AK+AW T Sbjct: 66 PTEYNAALNAKLDAGSAGDLITCRPFDASLELYNKKHLADLTGLSGMENFSDVAKSAWTT 125 Query: 144 DDGKDTFCMPMASVIHGFFYNTKIFKELNLEPPKTEAEFFKLLDTVKANGKYAPLAMGTS 203 DDGK TFC+PMASVIHGF YN F +L L P TE EFF +L+ +KA+G Y P+AMGT Sbjct: 126 DDGKATFCVPMASVIHGFIYNKDAFDQLGLSVPATEEEFFAVLEKIKADGNYIPMAMGTK 185 Query: 204 EQWESHQVLFTSIGPNYWKGEEGRKALIAGKAKFTDPQFVAAWEYEAKLGKYLPKGASAQ 263 + WE+ + + +IGPNYWKGEEGR AL+ G+ K TD +V + AK YL G AQ Sbjct: 186 DLWEAATMGYQNIGPNYWKGEEGRLALLKGEQKLTDEPWVEPFRVLAKWKDYLGDGFEAQ 245 Query: 264 TYSDSQNMFALGKGAVYPAGSWDIAYFNGKMDF--AAFPPPVPKNGDACYISDHNDIGMG 321 TY DSQN+F LG+ A+YPAGSW+I+ FN + +F AFPPPV K GD CYISDHNDIG+G Sbjct: 246 TYPDSQNLFTLGRAAIYPAGSWEISGFNTQAEFKMGAFPPPVKKAGDTCYISDHNDIGIG 305 Query: 322 INKKSKNKDDAYKFLAWLGSQEFADLYTNKVTGFFSLSNHLISVKDPIAKQMMGWRKNCA 381 +N KSKN D A FL W+ S EFA++Y N + GFFSL++ + + DP+A++ + WR+ C Sbjct: 306 LNAKSKNADAAKTFLTWVASPEFAEIYANALPGFFSLNSTAVKMSDPLAQEFVSWREKCK 365 Query: 382 STIRVNSQILNRGTPSMENEMWNVNAQVLNGKMSPQDAAAKIQAGFAKWYKP 433 TIR QIL+RGTP++ENE W ++A V+NG +P+ AA K+Q G W+KP Sbjct: 366 PTIRSTYQILSRGTPNLENETWVMSANVINGTDTPEAAAKKLQDGLDSWFKP 417 >mlr4771 [G] COG1653 ABC-type sugar transport system, periplasmic component Mlo Mesorhizobium loti Length = 419 Score = 458 bits (1178), Expect = e-128, Method: Compositional matrix adjust. Identities = 225/406 (55%), Positives = 287/406 (70%), Gaps = 4/406 (0%) Query: 32 FGLTGLAAAPGQAGTLTIESWRVDDLPLWQEVLIPAFQRSNPGITVKFSPTAPTEYDSSL 91 G GLA A + TL IESWR DDL +W++ LIPAF+ NPGI V F+P+APTEYD++L Sbjct: 16 LGSAGLAHA--EDVTLNIESWRGDDLAIWKDKLIPAFEAKNPGIKVVFAPSAPTEYDAAL 73 Query: 92 AARMAGGTAGDLVACRPFDVSLSLYNKGHLEKLDGKPGMEFFAPAAKAAWQTDDGKDTFC 151 A++A G+AGDL+ CRPFD SL LY KG+L L PGME F+P AK+AWQTDDGK +FC Sbjct: 74 GAKLAAGSAGDLITCRPFDKSLELYKKGNLADLSALPGMENFSPVAKSAWQTDDGKASFC 133 Query: 152 MPMASVIHGFFYNTKIFKELNLEPPKTEAEFFKLLDTVKANGKYAPLAMGTSEQWESHQV 211 +PMASVIHGF YN F +L ++ P T EFF LD +KA+G Y P+AMGT + WE+ + Sbjct: 134 VPMASVIHGFIYNKDAFDKLGIKVPTTRDEFFAALDKIKADGTYIPMAMGTKDLWEAATM 193 Query: 212 LFTSIGPNYWKGEEGRKALIAGKAKFTDPQFVAAWEYEAKLGKYLPKGASAQTYSDSQNM 271 + +IGPNYWKGE+GR+ALI G K TD +VA +E AK YL G AQTY DSQN+ Sbjct: 194 GYQNIGPNYWKGEDGRQALIKGTQKLTDKDWVAPYEELAKWKPYLGDGFEAQTYPDSQNL 253 Query: 272 FALGKGAVYPAGSWDIAYFNGKMDF--AAFPPPVPKNGDACYISDHNDIGMGINKKSKNK 329 F LG+ A+YPAGSW+I FN + F AFPPPV K GD CYISDH DIGMG+N SK+ Sbjct: 254 FTLGRAAIYPAGSWEIGLFNTQAQFKMGAFPPPVEKAGDTCYISDHTDIGMGLNAASKHA 313 Query: 330 DDAYKFLAWLGSQEFADLYTNKVTGFFSLSNHLISVKDPIAKQMMGWRKNCASTIRVNSQ 389 D A FL+W+ S +FA +Y N + GFFSL++ + + DP+A++ + WR C STIR Q Sbjct: 314 DAAKTFLSWVASPDFATIYANALPGFFSLNSSPVKMADPLAQEFVSWRGKCKSTIRSTYQ 373 Query: 390 ILNRGTPSMENEMWNVNAQVLNGKMSPQDAAAKIQAGFAKWYKPQQ 435 IL+RGTP++ENE W +A V+NG +P+ AA K+Q G WYKP + Sbjct: 374 ILSRGTPNLENETWVESANVINGTDTPEAAAKKLQTGLDSWYKPAK 419 >VCA1033 [G] COG1653 ABC-type sugar transport system, periplasmic component Vch Vibrio cholerae Length = 458 Score = 426 bits (1096), Expect = e-119, Method: Compositional matrix adjust. Identities = 205/405 (50%), Positives = 263/405 (64%), Gaps = 2/405 (0%) Query: 31 AFGLTGLAAAPGQAGTLTIESWRVDDLPLWQEVLIPAFQRSNPGITVKFSPTAPTEYDSS 90 A GL L + A L IESWR DD LW++ +IPAF+ +NPGI VKF+P Y + Sbjct: 8 ALGL--LLSGQLMASELVIESWRADDKALWEQKIIPAFEAANPGIKVKFNPVPNVNYTPT 65 Query: 91 LAARMAGGTAGDLVACRPFDVSLSLYNKGHLEKLDGKPGMEFFAPAAKAAWQTDDGKDTF 150 L + G AGDL+ CRPFD SL+L+ GHL ++ GME F A+A WQTD G TF Sbjct: 66 LWENLKAGKAGDLITCRPFDDSLALFKAGHLAEITEMAGMENFPSFAQAPWQTDSGAQTF 125 Query: 151 CMPMASVIHGFFYNTKIFKELNLEPPKTEAEFFKLLDTVKANGKYAPLAMGTSEQWESHQ 210 C+PMASVIHGFFYN KIF EL L P+T +FF +LD VKA+G+Y PL+M SE W + + Sbjct: 126 CVPMASVIHGFFYNKKIFNELGLSVPQTREQFFTVLDKVKADGRYIPLSMSGSESWVASE 185 Query: 211 VLFTSIGPNYWKGEEGRKALIAGKAKFTDPQFVAAWEYEAKLGKYLPKGASAQTYSDSQN 270 + + +IGPNYWKGE+GR ALI G+ D Q+V +E A+ YL + + Y S Sbjct: 186 LGYQNIGPNYWKGEDGRLALINGQEHLDDSQYVKVFEELARWRAYLGEDGELRDYGTSNE 245 Query: 271 MFALGKGAVYPAGSWDIAYFNGKMDFAAFPPPVPKNGDACYISDHNDIGMGINKKSKNKD 330 +F GK A+Y AGSW+IA F K+DF PPV K GD C+ +DH DIGMG+N SKN Sbjct: 246 LFTSGKAALYVAGSWEIAPFTDKVDFGVMRPPVAKQGDGCFFTDHTDIGMGMNPASKNPQ 305 Query: 331 DAYKFLAWLGSQEFADLYTNKVTGFFSLSNHLISVKDPIAKQMMGWRKNCASTIRVNSQI 390 A FL WL + EFA+LYTN + GFFSLSNH V +P A++MM WR C STIRV +QI Sbjct: 306 AAMAFLQWLTTPEFAELYTNSLPGFFSLSNHFFDVTNPAAREMMEWRDQCDSTIRVATQI 365 Query: 391 LNRGTPSMENEMWNVNAQVLNGKMSPQDAAAKIQAGFAKWYKPQQ 435 L+RG P + +E+ V+ VL GKM+P AA +++ G +WY P Q Sbjct: 366 LSRGQPKLGDELAEVSQAVLVGKMTPTAAAERLEQGLKRWYAPHQ 410 >BMEII0754 [G] COG1653 ABC-type sugar transport system, periplasmic component Bme Brucella melitensis Length = 240 Score = 273 bits (698), Expect = 6e-73, Method: Compositional matrix adjust. Identities = 128/238 (53%), Positives = 167/238 (70%), Gaps = 2/238 (0%) Query: 198 LAMGTSEQWESHQVLFTSIGPNYWKGEEGRKALIAGKAKFTDPQFVAAWEYEAKLGKYLP 257 +AMGT + WE+ + + +IGP YWKGEEGRKALIAGK K TDP++V ++ AK YL Sbjct: 1 MAMGTKDMWEAATMGYQNIGPTYWKGEEGRKALIAGKEKLTDPEWVEPFKVLAKWKDYLG 60 Query: 258 KGASAQTYSDSQNMFALGKGAVYPAGSWDIAYFNGKMDF--AAFPPPVPKNGDACYISDH 315 G AQTY DSQN+F LG+ A+YPAGSW+I FN + F AFPPPV GD CYISDH Sbjct: 61 DGFEAQTYPDSQNLFTLGRAAIYPAGSWEIGLFNTQAQFKMGAFPPPVKNAGDTCYISDH 120 Query: 316 NDIGMGINKKSKNKDDAYKFLAWLGSQEFADLYTNKVTGFFSLSNHLISVKDPIAKQMMG 375 NDIG+G+N SKN + A FL W+ S EFA++Y N + GFFSL++ + + DP+A++ + Sbjct: 121 NDIGLGLNAASKNAEQAKVFLNWVASPEFAEIYANALPGFFSLNSTAVKMADPLAQEFVS 180 Query: 376 WRKNCASTIRVNSQILNRGTPSMENEMWNVNAQVLNGKMSPQDAAAKIQAGFAKWYKP 433 WR+ C TIR QIL+RGTP++ENE W +A V+NG +P +A K+QAG WYKP Sbjct: 181 WREKCKLTIRSTYQILSRGTPNLENETWVESANVINGTDTPDEAGKKLQAGLDSWYKP 238 >BMEII0755 [G] COG1653 ABC-type sugar transport system, periplasmic component Bme Brucella melitensis Length = 139 Score = 166 bits (420), Expect = 1e-40, Method: Compositional matrix adjust. Identities = 78/141 (55%), Positives = 99/141 (70%), Gaps = 4/141 (2%) Query: 24 LLAACALAFGLTGLAAAPGQAGTLTIESWRVDDLPLWQEVLIPAFQRSNPGITVKFSPTA 83 LL + LA G A + TLT+ESWR DDL +WQE +IPAF+ +PGI + F+P+A Sbjct: 2 LLGSTLLATGSVAFA----EDVTLTVESWRNDDLQIWQEKIIPAFEAKHPGIKINFAPSA 57 Query: 84 PTEYDSSLAARMAGGTAGDLVACRPFDVSLSLYNKGHLEKLDGKPGMEFFAPAAKAAWQT 143 PTEY+ +L A++ G+ GDL+ACRPFD SL L+NKG L L GM+ F+ AK+AW T Sbjct: 58 PTEYNVALNAKLDAGSGGDLIACRPFDTSLELFNKGKLADLTDLEGMKNFSDVAKSAWTT 117 Query: 144 DDGKDTFCMPMASVIHGFFYN 164 DDG TFC+PMASVIHGF YN Sbjct: 118 DDGSKTFCVPMASVIHGFIYN 138