BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0015.0407.p         (161 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

mlr4774 [G] COG0395 ABC-type sugar transport system, permease co...   248   5e-66
BMEII0752 [G] COG0395 ABC-type sugar transport system, permease ...   240   9e-64
SMc02871 [G] COG0395 ABC-type sugar transport system, permease c...   239   2e-63
BH3682 [G] COG0395 ABC-type sugar transport system, permease com...   125   3e-29
BH2224 [G] COG0395 ABC-type sugar transport system, permease com...   118   4e-27

>mlr4774 [G] COG0395 ABC-type sugar transport system, permease component Mlo
           Mesorhizobium loti
          Length = 279

 Score =  248 bits (632), Expect = 5e-66,   Method: Compositional matrix adjust.
 Identities = 117/161 (72%), Positives = 144/161 (89%)

Query: 1   MIPIRLGTVSILQLVVALDLINTRTALVLVYTAQGLPLAVMILSEFMRQIPGELKDAARC 60
           MIPIRLGTV+ILQL+VA  L+NT TAL+LVYTAQGLPLAV ILSEFM+Q+  +LK+A R 
Sbjct: 119 MIPIRLGTVAILQLMVASGLVNTLTALILVYTAQGLPLAVFILSEFMKQVSDDLKNAGRI 178

Query: 61  DGVGELSIFFRVILPLLRPAIGTVAVFTMIPAWNDLWFPLILAPGEDTRTVTLGVQQFIG 120
           DG+ E +IFFR++LPL+RP++ TVAVFTMIP WNDLWFPLILAP E+T+TVTLG Q F+G
Sbjct: 179 DGLSEYTIFFRLVLPLVRPSMATVAVFTMIPIWNDLWFPLILAPSEETKTVTLGAQLFLG 238

Query: 121 QYATDWNSVLAALSMAVIPVLILYMAFSRQLIRGLTSGAVK 161
           Q+ T+WN++LAALS+A++PVLILY+ FSRQLIRG+TSGAVK
Sbjct: 239 QFVTNWNAILAALSLAIMPVLILYVIFSRQLIRGITSGAVK 279


>BMEII0752 [G] COG0395 ABC-type sugar transport system, permease component Bme
           Brucella melitensis
          Length = 279

 Score =  240 bits (613), Expect = 9e-64,   Method: Compositional matrix adjust.
 Identities = 114/161 (70%), Positives = 140/161 (86%)

Query: 1   MIPIRLGTVSILQLVVALDLINTRTALVLVYTAQGLPLAVMILSEFMRQIPGELKDAARC 60
           MIPIRLGTV++LQ +VA  L+NT TAL+LVYTAQGLPLA+ ILSEFMR +  +LK+A R 
Sbjct: 119 MIPIRLGTVALLQGMVAAGLVNTLTALILVYTAQGLPLAIFILSEFMRTVSDDLKNAGRI 178

Query: 61  DGVGELSIFFRVILPLLRPAIGTVAVFTMIPAWNDLWFPLILAPGEDTRTVTLGVQQFIG 120
           DG+ E +IFF+++LPL+RPA+ TVAVFTMIP WNDLWFPLILAP E T+TVTLG Q FIG
Sbjct: 179 DGMSEYAIFFKLVLPLIRPAMATVAVFTMIPIWNDLWFPLILAPSEATKTVTLGAQLFIG 238

Query: 121 QYATDWNSVLAALSMAVIPVLILYMAFSRQLIRGLTSGAVK 161
           Q+ T+WN+VLAALS+A+ P+LILY+ FSRQLIRG+T+GAVK
Sbjct: 239 QFVTNWNAVLAALSLAMFPILILYVLFSRQLIRGITAGAVK 279


>SMc02871 [G] COG0395 ABC-type sugar transport system, permease component Sme
           Sinorhizobium meliloti
          Length = 279

 Score =  239 bits (610), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 115/161 (71%), Positives = 139/161 (86%)

Query: 1   MIPIRLGTVSILQLVVALDLINTRTALVLVYTAQGLPLAVMILSEFMRQIPGELKDAARC 60
           MIPIRLGTV+ILQ +VA  L+NT TAL+LVYTAQGLPLAV ILSEFMR +  +LK+A R 
Sbjct: 119 MIPIRLGTVAILQGMVATGLVNTLTALILVYTAQGLPLAVFILSEFMRTVSDDLKNAGRI 178

Query: 61  DGVGELSIFFRVILPLLRPAIGTVAVFTMIPAWNDLWFPLILAPGEDTRTVTLGVQQFIG 120
           DG+ E +IF R++LPL+RPA+ TVAVFTMIP WNDLWFPLILAP E T+TVTLG Q FIG
Sbjct: 179 DGLSEYAIFLRLVLPLIRPAMATVAVFTMIPIWNDLWFPLILAPAEATKTVTLGSQIFIG 238

Query: 121 QYATDWNSVLAALSMAVIPVLILYMAFSRQLIRGLTSGAVK 161
           Q+ T+WN+VL+ALS+A+ PVL+LY+ FSRQLIRG+T+GAVK
Sbjct: 239 QFVTNWNAVLSALSLAIFPVLVLYVIFSRQLIRGITAGAVK 279


>BH3682 [G] COG0395 ABC-type sugar transport system, permease component Bha
           Bacillus halodurans
          Length = 293

 Score =  125 bits (315), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 58/161 (36%), Positives = 100/161 (62%)

Query: 1   MIPIRLGTVSILQLVVALDLINTRTALVLVYTAQGLPLAVMILSEFMRQIPGELKDAARC 60
           MIP+    + +    + + L++   A++L YTA  LPL +MIL  F   +P EL++AA  
Sbjct: 132 MIPVHSTLIPLFNFFLNVGLMDHPLAIILTYTAFNLPLTIMILLGFYYTLPRELEEAAIM 191

Query: 61  DGVGELSIFFRVILPLLRPAIGTVAVFTMIPAWNDLWFPLILAPGEDTRTVTLGVQQFIG 120
           DG     +FF++ILP+  P + T A+  MI  WN+  F       +  +T+T+G+Q FIG
Sbjct: 192 DGCSIHRLFFQIILPMTAPVVATTAIINMIYNWNEFVFVNTFISSDKYKTLTVGIQNFIG 251

Query: 121 QYATDWNSVLAALSMAVIPVLILYMAFSRQLIRGLTSGAVK 161
           QY+TDW ++ A L ++++P+L+ ++  S +++ G+T+G+VK
Sbjct: 252 QYSTDWGAIGATLVISILPILLAFIFLSNRIVEGITAGSVK 292


>BH2224 [G] COG0395 ABC-type sugar transport system, permease component Bha
           Bacillus halodurans
          Length = 276

 Score =  118 bits (296), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 60/162 (37%), Positives = 98/162 (60%), Gaps = 1/162 (0%)

Query: 1   MIPIRLGTVSILQLVVALDLINTRTALVLVYTAQGLPLAVMILSEFMRQ-IPGELKDAAR 59
           ++P     V + Q+VV L ++NTRT  +L   A  LPL + + + F+R  IP EL++AA+
Sbjct: 114 VVPPLTALVPLYQMVVNLGMLNTRTIAILNNLAAFLPLTIFLYAGFIRSTIPKELEEAAK 173

Query: 60  CDGVGELSIFFRVILPLLRPAIGTVAVFTMIPAWNDLWFPLILAPGEDTRTVTLGVQQFI 119
            DG   +SIFFR++ PLL+P   +V + + +  WND  F +     +D  T+T+ +  F 
Sbjct: 174 IDGCNTISIFFRIVFPLLKPVTASVLIISCVFIWNDYQFAIFFLQSKDVHTLTVALASFF 233

Query: 120 GQYATDWNSVLAALSMAVIPVLILYMAFSRQLIRGLTSGAVK 161
           G+  ++ N V AA  MA++P+ IL++   +  I GL+SG+VK
Sbjct: 234 GENQSNLNLVAAAAFMAMLPMTILFLFLQKYFIAGLSSGSVK 275