BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0015.0393.p         (188 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

PA3723 [C] COG1902 NADH Pae Pseudomonas aeruginosa                    150   1e-36
RSc0702 [C] COG1902 NADH Rso Ralstonia solanacearum                   150   2e-36
all0827 [C] COG1902 NADH Nos Nostoc sp. PCC 7120                      144   1e-34
Cgl2986 [C] COG1902 NADH Cgl Corynebacterium glutamicum               137   1e-32
VNG0933G [C] COG1902 NADH Hbs Halobacterium sp. NRC-1                 136   3e-32

>PA3723 [C] COG1902 NADH Pae Pseudomonas aeruginosa
          Length = 368

 Score =  150 bits (379), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 85/164 (51%), Positives = 100/164 (60%), Gaps = 1/164 (0%)

Query: 1   MSALFTPFKLKDLNLRNRIAVPPMCQYMAVDGKANEWHLSHYASIARGGAGLVIVEATAV 60
           MS LF P  L+ + L NRIAV PMCQY A +G AN+WHL H  S A GGAGLVIVEATAV
Sbjct: 1   MSLLFEPLSLRQITLPNRIAVSPMCQYSAQEGLANDWHLVHLGSRAVGGAGLVIVEATAV 60

Query: 61  APEGRITPGCTGIWSDELAQAFVPVVQAIKAAGAVPGIQIGHAGRKASANRPWEGDDHMA 120
            PEGRIT    GIWSD   +    + + I++ GAV G+Q+ HAGRKAS  RPW G     
Sbjct: 61  LPEGRITADDLGIWSDAHVEPLHRITRFIESQGAVAGVQLAHAGRKASTWRPWLGKHGSV 120

Query: 121 ADDARGWDTIAPSAIAFGKGLPKVPKAMSLDDIARVRQNFVDAA 164
                GW  +APSAI F       P+A+S   I  + Q FV AA
Sbjct: 121 PIGDGGWIPVAPSAIPFDPQ-HTTPEALSEAQIEALVQAFVRAA 163


>RSc0702 [C] COG1902 NADH Rso Ralstonia solanacearum
          Length = 370

 Score =  150 bits (379), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 80/165 (48%), Positives = 105/165 (63%), Gaps = 3/165 (1%)

Query: 1   MSALFTPFKLKDLNLRNRIAVPPMCQYMAVDGKANEWHLSHYASIARGGAGLVIVEATAV 60
           MSALF PF L+ L L NRI + PMCQY A  G+A  WH +H  +++  GA L+++EATAV
Sbjct: 1   MSALFQPFSLRGLRLDNRIVISPMCQYSADQGQATAWHQTHLGALSLSGAALLMIEATAV 60

Query: 61  APEGRITPGCTGIWSDELAQAFVPVVQAIKAAGAVP-GIQIGHAGRKASANRPWEGDDHM 119
           +PEGRITPGC G+W D    A    + AI+     P GIQI HAGRKAS+ RPWEG   +
Sbjct: 61  SPEGRITPGCLGLWDDATEAALAGALAAIRPHAQTPIGIQIAHAGRKASSARPWEGGALL 120

Query: 120 AADDARGWDTIAPSAIAFGKGLPKVPKAMSLDDIARVRQNFVDAA 164
             +   GW+TI PSA+   +   + P+ M+  D+ARVR+ F   A
Sbjct: 121 PPESG-GWETIGPSALP-QRPEERPPRTMTEADLARVREAFAATA 163


>all0827 [C] COG1902 NADH Nos Nostoc sp. PCC 7120
          Length = 355

 Score =  144 bits (362), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 78/165 (47%), Positives = 104/165 (63%), Gaps = 3/165 (1%)

Query: 1   MSALFTPFKLKDLNLRNRIAVPPMCQYMAVDGKANEWHLSHYASIARGGAGLVIVEATAV 60
           M+ LF P +++++  RNRIA+ PMCQY + +G AN+WHL H  S A GGAGLV+ EA AV
Sbjct: 1   MTHLFEPLRIREVTFRNRIALSPMCQYSSTNGFANDWHLVHLGSRAVGGAGLVMTEAAAV 60

Query: 61  APEGRITPGCTGIWSDELAQAFVPVVQAIKAAGAVPGIQIGHAGRKASANRPWEGDDHMA 120
              GRI+P   GIWSD   +A    V  I   GAV  IQ+ HAGRKAS ++P +G   + 
Sbjct: 61  EARGRISPQDLGIWSDAHIEALARTVGLIHNFGAVAAIQLAHAGRKASTSKPSKGGKFL- 119

Query: 121 ADDARGWD-TIAPSAIAFGKGLPKVPKAMSLDDIARVRQNFVDAA 164
            +   GW   ++ SAIAF K  P VP+A+S++ I +V Q FV A 
Sbjct: 120 DESHEGWRPVVSSSAIAFSKESP-VPEALSIEGIQQVIQAFVQAT 163


>Cgl2986 [C] COG1902 NADH Cgl Corynebacterium glutamicum
          Length = 373

 Score =  137 bits (346), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 72/167 (43%), Positives = 105/167 (62%), Gaps = 5/167 (2%)

Query: 1   MSALFTPFKLKDLNLRNRIAVPPMCQYMAVDGKA--NEWHLSHYASIARGGAGLVIVEAT 58
           +S LFTP +++D+ + NR+ + PMC Y A  G     ++H +HYA+ A GG GLV+VEAT
Sbjct: 14  VSKLFTPIQIRDITIPNRVWMSPMCTYSAATGSGLPTDFHQAHYAARAAGGVGLVMVEAT 73

Query: 59  AVAPEGRITPGCTGIWSDELAQAFVPVVQAIKAAGAVPGIQIGHAGRKASANRPWEGDDH 118
            V P   I+P   G+WS +  + F  V  AI+A GAVP +Q+ HAGRKAS + PW G  +
Sbjct: 74  GVNPVAPISPVDLGLWSHDQIEPFSRVTAAIRAGGAVPAVQLAHAGRKASTDAPWNGGGY 133

Query: 119 MAADDARGWDTIAPSAIAFGKGLPKVPKAMSLDDIARVRQNFVDAAI 165
           +   +  GW+T+ PS +AF  GLP  P+ +++ +I  V Q F  AA+
Sbjct: 134 VGP-ETNGWETVGPSPLAF-PGLPA-PRELTVSEIQEVVQQFAGAAV 177


>VNG0933G [C] COG1902 NADH Hbs Halobacterium sp. NRC-1
          Length = 366

 Score =  136 bits (342), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 76/167 (45%), Positives = 96/167 (57%), Gaps = 3/167 (1%)

Query: 1   MSALFTPFKLKDLNLRNRIAVPPMCQYMAVD--GKANEWHLSHYASIARGGAGLVIVEAT 58
           M+  F+P +L+D  +RNR A+ PMCQY   D  G A +WH  H  S A GGAG+V+ EAT
Sbjct: 1   MADSFSPLELRDTTIRNRFAMSPMCQYSCEDRDGLATDWHRVHLGSRAVGGAGVVMTEAT 60

Query: 59  AVAPEGRITPGCTGIWSDELAQAFVPVVQAIKAAGAVPGIQIGHAGRKASANRPWEGDDH 118
           AV   GRI+P   GIWSDE  +A  PV + I   GA P IQ+ HAGRKA   R W  D  
Sbjct: 61  AVEERGRISPEDLGIWSDEHGEALAPVAEFISDQGATPAIQLAHAGRKAGTARIWGDDSG 120

Query: 119 MAADDARGWDTIAPSAIAF-GKGLPKVPKAMSLDDIARVRQNFVDAA 164
               D  GWD +APSA  +  +   +  + +S  DI  V + F DAA
Sbjct: 121 PVPLDEGGWDPVAPSADPYPYEDDERDTRKLSTADIEDVVEAFRDAA 167