BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0015.0352.p (345 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value RSc2097 [O] COG1975 Xanthine and CO dehydrogenases maturation fa... 274 2e-73 CC2617 Non COG 159 1e-38 PA1522 [O] COG1975 Xanthine and CO dehydrogenases maturation fac... 155 1e-37 SMb21288 [O] COG1975 Xanthine and CO dehydrogenases maturation f... 146 8e-35 DRA0179 [O] COG1975 Xanthine and CO dehydrogenases maturation fa... 108 2e-23 >RSc2097 [O] COG1975 Xanthine and CO dehydrogenases maturation factor, XdhC/CoxF family Rso Ralstonia solanacearum Length = 342 Score = 274 bits (700), Expect = 2e-73, Method: Compositional matrix adjust. Identities = 158/318 (49%), Positives = 194/318 (61%), Gaps = 26/318 (8%) Query: 9 VLVTVAQIQGSTPREPGARMLYTAEGQFDTIGGGHLEWRAAQIARAMLAADSDALADQRR 68 VLVTV +QGS PREPG ML A+ F TIGGGHLEWRA IA+AM+ A + +R+ Sbjct: 25 VLVTVVDVQGSAPREPGTLMLVCADAFFGTIGGGHLEWRAMAIAQAMMDAPQASGDARRQ 84 Query: 69 LERIALGPSLGQCCGGVVFLCFERIDAGATSLRTWQAL-EQAWCSGTDRWRALPLDHDAP 127 RI LGP+LGQCCGGVV L ER+DA + W A+ +QA R +P D P Sbjct: 85 YVRIPLGPALGQCCGGVVRLSLERLDARDAA---WLAVADQAMRQRRSVRRFVPADAALP 141 Query: 128 QQLLENDASGLGMPPEIIRHARQTQLVRDDQGRRWLL---DLCRAHQPQVVLFGAGHVGA 184 DA+ G +V D G L D+ +VL GAGHVG Sbjct: 142 VDATIGDAAAAG-------------VVIDANGFTQTLLPPDM------SIVLCGAGHVGH 182 Query: 185 AIVKVLSTLPCRVLWVDEREDMFPPGLPPQIRIEATDVPNAAVDMAEPGAYYLVMTHSHA 244 AIV+ L+ LPCRV WVDER+ MFP PP + IEATD P A +D A G+Y+LVMTH+HA Sbjct: 183 AIVRALAHLPCRVTWVDERDAMFPAEAPPNVAIEATDTPEAVIDAAPAGSYFLVMTHNHA 242 Query: 245 LDQQLSERILKREDAAWFGLIGSITKRKQFEHRLSERGFSAAQLERMTCPIGIPGIYGKE 304 LD L ERI++R D A+FGLIGS TKR +FEHR+ G A+L M CPIG+ GI K Sbjct: 243 LDLALCERIMRRTDFAYFGLIGSRTKRARFEHRMVAHGVDPARLPEMVCPIGVAGIADKA 302 Query: 305 PASIAIAVVAQLMQLWEL 322 P IA++VVAQL+Q+ EL Sbjct: 303 PDIIAVSVVAQLLQVREL 320 >CC2617 Non COG Length = 338 Score = 159 bits (402), Expect = 1e-38, Method: Compositional matrix adjust. Identities = 121/320 (37%), Positives = 159/320 (49%), Gaps = 20/320 (6%) Query: 8 AVLVTVAQIQGSTPREPGARMLYTAEGQFDTIGGGHLEWRAAQIARAMLAADSDALADQR 67 A LVTV +GS PRE G +M+ GQ TIGGG+LE+R A AR ML A Sbjct: 19 AALVTVLATEGSAPREAGTKMVVWRAGQAGTIGGGNLEYRVADQARRMLDGGQAHFA--- 75 Query: 68 RLERIALGPSLGQCCGGVVFLCFERIDAGATSLRTWQALEQAWCSGTD-RWRALP-LDHD 125 ++ LGP L QCCGG V L ER++ + T A + R R P L Sbjct: 76 -IQDYPLGPLLAQCCGGRVRLFLERLNDNSRDWLTDAAKRMDAAQPFEVRTRFEPGLLTK 134 Query: 126 APQQLLENDASG----LGMPPEIIRHARQTQLVRDDQGRRWLLDLCRAHQPQVVLFGAGH 181 +L +A G L P R AR + L++ A +P ++LFGAGH Sbjct: 135 TIAPILSTEADGPLVSLAGAPATARGARP-------ELGDVLVERADAPRPPLLLFGAGH 187 Query: 182 VGAAIVKVLSTLPCRVLWVDEREDMFPPGLPPQIRIEATDVPNAAVDMAEPGAYYLVMTH 241 VG AI + LP R+ W D R + G +E ++ A+ A AY LV+TH Sbjct: 188 VGQAIARAFEPLPFRLSWYDSRPETAEIG--GVTVLEPAELAAKAMG-AGADAYGLVLTH 244 Query: 242 SHALDQQLSERILKREDAAWFGLIGSITKRKQFEHRLSERGFSAAQLERMTCPIGIPGIY 301 HALD L L ++FG+IGS TKR +F RL + GFS A L R+TCPIG+P + Sbjct: 245 DHALDYALVSAGLAGGGFSYFGVIGSKTKRARFMKRLRDDGFSEAVLTRLTCPIGLPHLK 304 Query: 302 GKEPASIAIAVVAQLMQLWE 321 K P IA++V A L+ E Sbjct: 305 SKAPEVIAVSVAADLLMRQE 324 >PA1522 [O] COG1975 Xanthine and CO dehydrogenases maturation factor, XdhC/CoxF family Pae Pseudomonas aeruginosa Length = 279 Score = 155 bits (392), Expect = 1e-37, Method: Compositional matrix adjust. Identities = 73/154 (47%), Positives = 102/154 (66%) Query: 171 QPQVVLFGAGHVGAAIVKVLSTLPCRVLWVDEREDMFPPGLPPQIRIEATDVPNAAVDMA 230 Q + +FGAGHVG A+V +L++LPCRV W+D RE FP LP + D V+ Sbjct: 102 QAHIAVFGAGHVGRALVPLLASLPCRVRWIDSREHEFPALLPDGVEKVVNDEVLDEVERM 161 Query: 231 EPGAYYLVMTHSHALDQQLSERILKREDAAWFGLIGSITKRKQFEHRLSERGFSAAQLER 290 PG++++VMTH+H LD +L+ IL R D A+FGLIGS TKR +FEHRL ERG A +L+R Sbjct: 162 PPGSHFIVMTHNHPLDLELTAAILARNDFAYFGLIGSKTKRVKFEHRLRERGVDAERLQR 221 Query: 291 MTCPIGIPGIYGKEPASIAIAVVAQLMQLWELRF 324 M CP+G+ + GK PA IAI++ +++ + F Sbjct: 222 MRCPMGLEQVKGKLPAEIAISIAGEVIATYNAAF 255 Score = 96.3 bits (238), Expect = 9e-20, Method: Compositional matrix adjust. Identities = 49/91 (53%), Positives = 62/91 (68%), Gaps = 4/91 (4%) Query: 1 MQQESVSAVLVTVAQIQGSTPREPGARMLYTAEGQFDTIGGGHLEWRAAQIARAMLAADS 60 +Q+ VLVT+ + +GSTPR G++M+ +AE +DTIGGGHLE+RA IAR MLAA + Sbjct: 10 LQRSGEPCVLVTIIEERGSTPRNAGSKMVVSAERLYDTIGGGHLEYRAQAIAREMLAART 69 Query: 61 DALADQRRLERIALGPSLGQCCGGVVFLCFE 91 RLER +LG SLGQCCGG L FE Sbjct: 70 ----QDTRLERFSLGASLGQCCGGATVLLFE 96 >SMb21288 [O] COG1975 Xanthine and CO dehydrogenases maturation factor, XdhC/CoxF family Sme Sinorhizobium meliloti Length = 288 Score = 146 bits (368), Expect = 8e-35, Method: Compositional matrix adjust. Identities = 110/323 (34%), Positives = 146/323 (45%), Gaps = 64/323 (19%) Query: 6 VSAVLVTVAQIQGSTPREPGARMLYTAEGQFDTIGGGHLEWRAAQIARAMLAADSDALAD 65 + VLV VA GSTPR+ A ML + + F TIGGG LE+ A AR ++ A AD Sbjct: 18 TACVLVEVASAAGSTPRDADAWMLVSKDRTFSTIGGGQLEFMAIDHARKLVQG---ANAD 74 Query: 66 QRRLERIALGPSLGQCCGGVVFLCFERIDAGATSLRTWQALEQAWCSGTDRWRALPLDHD 125 R I LGP +GQCCGG V L F++ +D D Sbjct: 75 LRLA--IPLGPEIGQCCGGHVALSFKK-----------------------------VDAD 103 Query: 126 APQQLLENDASGLGMPPEIIRHARQTQLVRDDQGRRWLLDLCRAHQPQVVLFGAGHVGAA 185 L+E DD+ AH+P V +FGAGHVG A Sbjct: 104 TRAALIERS---------------------DDE---------IAHRPHVYIFGAGHVGNA 133 Query: 186 IVKVLSTLPCRVLWVDEREDMFPPGLPPQIRIEATDVPNAAVDMAEPGAYYLVMTHSHAL 245 + LS +P R + VD RE P I T +P A V A P + ++V+TH HAL Sbjct: 134 LAMALSHVPLRTVLVDTREHELSAADVPGIETCLTAMPEATVRDAPPDSAFVVLTHDHAL 193 Query: 246 DQQLSERILKREDAAWFGLIGSITKRKQFEHRLSERGFSAAQLERMTCPIGIPGIYGKEP 305 D ++ L REDA++ G+IGS TKR F++ LS R+ CPIG + K P Sbjct: 194 DFLIATEALGREDASYVGMIGSKTKRATFKNWLSREVDRPELFGRLVCPIGGTAVKDKRP 253 Query: 306 ASIAIAVVAQLMQLWELRFTQPK 328 IA A+++ R QP+ Sbjct: 254 PVIAALAAAEILTAALNRHLQPR 276 >DRA0179 [O] COG1975 Xanthine and CO dehydrogenases maturation factor, XdhC/CoxF family Dra Deinococcus radiodurans Length = 274 Score = 108 bits (269), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 74/220 (33%), Positives = 107/220 (48%), Gaps = 19/220 (8%) Query: 128 QQLLENDASGLGMPPEIIRHARQTQLVRDDQGRR-------WLLDLCRAHQPQVVLFGAG 180 + LLE AS PE++ R T ++ GR+ LL+ R P V LFG G Sbjct: 60 RALLETGASA----PELLT-LRLTDRAPNEYGRQCCGGEVTLLLEPLRTAFPVVALFGIG 114 Query: 181 HVGAAIVKVLSTLPCRVLWVDEREDMFPP-------GLPPQIRIEATDVPNAAVDMAEPG 233 HVG + +LS P + D R P G P ++ + + +P A+ PG Sbjct: 115 HVGLELGLLLSRHPVELHLADSRAAQLTPERLAPLRGGPARLHVHHSPIPEMALAELPPG 174 Query: 234 AYYLVMTHSHALDQQLSERILKREDAAWFGLIGSITKRKQFEHRLSERGFSAAQLERMTC 293 A + +TH HA D L + L R D A+ GLIGS K +F +L G + ++ +TC Sbjct: 175 ACAVFLTHDHAEDLALCDAALHRGDLAFTGLIGSAVKWSRFREQLRAAGHTPEAIKTITC 234 Query: 294 PIGIPGIYGKEPASIAIAVVAQLMQLWELRFTQPKPKAWP 333 P+G+PG+ GK PA IA+++ AQL L P P+ P Sbjct: 235 PVGLPGLGGKAPAVIALSIAAQLYPLLFPAVPAPSPERTP 274