BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0015.0320.p         (217 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AGc1747 [R] COG3740 Phage head maturation protease Atu Agrobacte...   116   4e-26
CC2786 Non COG                                                         87   3e-17

>AGc1747 [R] COG3740 Phage head maturation protease Atu Agrobacterium
           tumefaciens strain C58 (Cereon)
          Length = 190

 Score =  116 bits (291), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 62/142 (43%), Positives = 87/142 (61%), Gaps = 3/142 (2%)

Query: 13  VKDDGTFSGYASIFGNVDLGRDIVLPGAFTKSLARLKASGDPLPLLWQHDETQPIGGYDE 72
           +  DGTFSGYAS+FG VDLG+D++  GAF +S+    A+G  + +L+QHD  +PIG +  
Sbjct: 22  ITSDGTFSGYASVFGEVDLGKDVIERGAFRRSIEERGAAG--IRMLYQHDPAEPIGAWRT 79

Query: 73  LEEDERGLRVKGFLLKDDIPLAAQAHSLMKRRIVKGLSIGYYVLDDSWNEKERTRSLKEL 132
           + EDERGL V+G +L   +  + + HSLMK   + GLSIG+  +          R + E 
Sbjct: 80  IREDERGLYVEG-ILAPGVARSREVHSLMKTGALDGLSIGFRTVRSGKGAGSGVRRILEA 138

Query: 133 DLLEVSAVTFPMNTEALIDSVK 154
           DL E+S VTFPM   A +  VK
Sbjct: 139 DLWEISVVTFPMLPSARVSDVK 160


>CC2786 Non COG
          Length = 138

 Score = 87.0 bits (214), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 53/129 (41%), Positives = 75/129 (58%), Gaps = 7/129 (5%)

Query: 16  DGTFSGYASIFGNVDLGRDIVLPGAFTKSLARLKASGDPLPLLWQHDETQPIGGYDELEE 75
           D    GYAS+F   DL  D+   GAF +SLA    +G P+ +L QHDE +PIG +DE+ E
Sbjct: 4   DLKIEGYASLFWTRDLNDDVTAAGAFAQSLA----AGAPVTMLHQHDEAEPIGVWDEVFE 59

Query: 76  DERGLRVKGFLLKDDIPLAAQAHSLMKRRIVKGLSIGYYVLDDSWNEKERTRSLKELDLL 135
           D +GL V+G +L+   P      +L++   + GLSIG+  +     +    R LK ++L 
Sbjct: 60  DAKGLFVRGRILR-TTPRGTLVAALVEAGALDGLSIGFRQIKA--RQDGSLRVLKRVELW 116

Query: 136 EVSAVTFPM 144
           EVS VTFPM
Sbjct: 117 EVSVVTFPM 125