BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0015.0282.p         (327 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

STM2364 [S] COG3147 Uncharacterized protein conserved in bacteri...    62   1e-09

>STM2364 [S] COG3147 Uncharacterized protein conserved in bacteria Sty
           Salmonella typhimurium LT2
          Length = 224

 Score = 62.4 bits (150), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 37/95 (38%), Positives = 56/95 (58%), Gaps = 4/95 (4%)

Query: 235 ASAAAAPAP---AEKKPAAAGGKFVIQVAALATQDKVNELRNKLSAAGIHSYTQKIATEA 291
           A++   PAP   A+ KPA  G  +V+Q+ AL   DKVNE+  KL +AG   YT       
Sbjct: 125 AASTPTPAPQPVADDKPAPTGKAYVVQLGALKNADKVNEIVGKLRSAGFRVYTSPSTPVQ 184

Query: 292 GERTRIRVGPFASREEAERMGGRIKKL-GLNATIV 325
           G+ TRI VGP AS+++ +   G +K++ GL+  ++
Sbjct: 185 GKITRILVGPDASKDKMKGSLGELKQISGLSGVVM 219