BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0015.0250.p         (75 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

RSc0004 [U] COG0706 Preprotein translocase subunit YidC Rso Rals...    68   4e-12

>RSc0004 [U] COG0706 Preprotein translocase subunit YidC Rso Ralstonia
          solanacearum
          Length = 553

 Score = 68.2 bits (165), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 30/51 (58%), Positives = 36/51 (70%)

Query: 1  MDIKRTVLWVVFSFSLLLLWDGWMRHNGHQSMFFPSANPTQEQAAANPAAP 51
          MDIKRT+LWV+FS S++LL+D W R NGHQSMFFP+       AAA    P
Sbjct: 1  MDIKRTILWVIFSLSVVLLFDNWQRANGHQSMFFPTPQTVTTTAAAPGGTP 51