BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0015.0212.p (272 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value mlr2579 [K] COG0583 Transcriptional regulator Mlo Mesorhizobium ... 175 1e-43 slr1871 [K] COG0583 Transcriptional regulator Syn Synechocystis 146 6e-35 mll3011 [K] COG0583 Transcriptional regulator Mlo Mesorhizobium ... 145 7e-35 XF1132 [K] COG0583 Transcriptional regulator Xfa Xylella fastidi... 144 2e-34 RSp1110 [K] COG0583 Transcriptional regulator Rso Ralstonia sola... 144 2e-34 >mlr2579 [K] COG0583 Transcriptional regulator Mlo Mesorhizobium loti Length = 304 Score = 175 bits (443), Expect = 1e-43, Method: Compositional matrix adjust. Identities = 103/264 (39%), Positives = 151/264 (57%), Gaps = 6/264 (2%) Query: 1 VGKAVARLEERLKRPLLQRGRRRVELTDAGDAFYQVCVRVLDELKSAEDMLASDELAPSG 60 +GK+VA+LE+RL LL R R + T G ++Y+ CVR L E+++A+ +LA+ PSG Sbjct: 35 IGKSVAQLEQRLGVRLLNRTTRSLRPTSEGVSYYEACVRALAEIEAAQSLLAARRHVPSG 94 Query: 61 RLRVDMPATFGRLRGMDSLLAFAEKHPQVTPQVSFTDRFVDLVEEGLDVVVRIGGGDVWP 120 RLRVD+P FGR L + K P++T ++SF DR VDL+EEG+D+ +R+G D Sbjct: 95 RLRVDVPLAFGRRCVAPVLFEISRKFPELTVEISFNDRRVDLIEEGIDLAIRMGELDD-S 153 Query: 121 ATLGYTCLGHEELVFCAAPSYLARRGEPRTLEELQIHDAVLYARADGSSSPWLIKDGDQP 180 +L + + CAAP+YL G PR++E+L H + Y R +G SP +I+ GD Sbjct: 154 LSLAARRIYAQRSAICAAPAYLEEHGRPRSVEDLAHHSVIGYGR-EGVVSPRVIRHGDGR 212 Query: 181 VVRQHAEGRIILGQAEAQVAAVQAGLGIAQLATWVVEQALREGSLVAILPAHVTQGLPLH 240 + R++LG E + A AG GIA L TW+ +LR G L +L + + +H Sbjct: 213 QTTFAPKARLVLGHGEPMLDAALAGCGIAFLPTWLAADSLRHGDLEMVLSDCEVENIAVH 272 Query: 241 IVWQRSREHSAKVR----AAVGHF 260 VW +R + KVR A V HF Sbjct: 273 AVWPVTRALTPKVRVVVDALVEHF 296 >slr1871 [K] COG0583 Transcriptional regulator Syn Synechocystis Length = 295 Score = 146 bits (368), Expect = 6e-35, Method: Compositional matrix adjust. Identities = 90/254 (35%), Positives = 133/254 (52%), Gaps = 3/254 (1%) Query: 1 VGKAVARLEERLKRPLLQRGRRRVELTDAGDAFYQVCVRVLDELKSAEDMLASDELAPSG 60 V K V LE LK LL R R+V T G AFY+ V++L +L+ AE ++ P G Sbjct: 33 VNKMVIALENELKVQLLHRSTRKVTPTPTGIAFYEKSVQILADLEEAELSVSQLHGEPKG 92 Query: 61 RLRVDMPATFGRLRGMDSLLAFAEKHPQVTPQVSFTDRFVDLVEEGLDVVVRIGGGDVWP 120 LRV+ P TFG + + F H QV Q++ DRFVD + EG D+++RI + Sbjct: 93 LLRVNAPMTFGTMYIAPLVAKFMALHSQVEVQLTLEDRFVDAIAEGYDLLIRI-AQPLES 151 Query: 121 ATLGYTCLGHEELVFCAAPSYLARRGEPRTLEELQIHDAVLYARADGSSSPWLIKDGDQP 180 A+L L +L+ CA+P YLA RG P+ LE+LQ H+ +LY + G S + + Sbjct: 152 ASLICQPLFQTKLLLCASPEYLAVRGMPQALEDLQRHNCLLYGYSSGGSQWQFLGQAGEK 211 Query: 181 VVRQHAEGRIILGQAEAQVAAVQAGLGIAQLATWVVEQALREGSLVAILPAHVTQGLPLH 240 V+ G EA AV GLGIA L ++V+ L G + ILP + + L + Sbjct: 212 VIS--VSGNFCSNNGEALAIAVAQGLGIALLPQFIVQPYLEAGKMQIILPDYCLRELTVS 269 Query: 241 IVWQRSREHSAKVR 254 +++ +R + KV+ Sbjct: 270 LIYPVNRHLATKVK 283 >mll3011 [K] COG0583 Transcriptional regulator Mlo Mesorhizobium loti Length = 292 Score = 145 bits (367), Expect = 7e-35, Method: Compositional matrix adjust. Identities = 101/257 (39%), Positives = 142/257 (55%), Gaps = 4/257 (1%) Query: 1 VGKAVARLEERLKRPLLQRGRRRVELTDAGDAFYQVCVRVLDELKSAEDMLASDELAPSG 60 V KAVA+LEERL LL R R + TDAG +FY+ R +DE AE+ A +G Sbjct: 33 VSKAVAQLEERLGVRLLSRTTRGLSPTDAGLSFYEGAKRAVDEADEAENAARGTAAALTG 92 Query: 61 RLRVDMPATFGRLRGMDSLLAFAEKHPQVTPQVSFTDRFVDLVEEGLDVVVRIGGGDVWP 120 LR+ TFGRL + L AF + HP++ +V+ DR VDLVEEG+DV++R+ G P Sbjct: 93 LLRIGTSVTFGRLHVVPRLKAFLDAHPRLDVEVAMDDRNVDLVEEGVDVMLRL-GESFAP 151 Query: 121 ATLGYTCLGHEELVFCAAPSYLARRGEPRTLEELQIHDAVLYARADGSSSPWLIKDGDQP 180 A +G LV AAPSYLAR GEP +EL H+A+L+ RA G+S W + G + Sbjct: 152 AHIGRKIAACRRLV-VAAPSYLAREGEPIAPDELSRHEAILFVRA-GTSIRWTFRRGAEE 209 Query: 181 VVRQHAEGRIILGQAEAQVAAVQAGLGIAQLATWVVEQALREGSLVAILPAHVTQGLPLH 240 V +GR+ + AE AV +G+G + W+ + LR G++ IL + L Sbjct: 210 -VSLAGQGRLRVTSAEGIREAVLSGIGFTVGSEWMFDAELRSGAVRPILTEWTLPPVELW 268 Query: 241 IVWQRSREHSAKVRAAV 257 ++ R+ SA+ R V Sbjct: 269 ALFPAGRKASARARTFV 285 >XF1132 [K] COG0583 Transcriptional regulator Xfa Xylella fastidiosa 9a5c Length = 301 Score = 144 bits (363), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 86/261 (32%), Positives = 136/261 (52%), Gaps = 8/261 (3%) Query: 1 VGKAVARLEERLKRPLLQRGRRRVELTDAGDAFYQVCVRVLDELKSAEDMLASDELAPSG 60 +GKA+ARLE RL L QR R LT+ G +Y+ C+R + EL++ E ML +G Sbjct: 34 IGKAIARLEMRLGVQLFQRTTRVQSLTEDGQQYYERCLRAIKELRAGEAMLEQGRREVAG 93 Query: 61 RLRVDMPATFGRLRGMDSLLAFAEKHPQVTPQVSFTDRFVDLVEEGLDVVVR---IGGGD 117 +L V +P FGR L +A +HPQ+ +++F+D VDL+ +G D+ VR +G G Sbjct: 94 QLHVSLPVLFGRHCVAPILRTYAREHPQLELELNFSDHHVDLIADGFDLAVRNGPLGNG- 152 Query: 118 VWPATLGYTCLGHEELVFCAAPSYLARRGEPRTLEELQIHDAVLYARADGSSSPWLIKDG 177 TL LG++ + CA+P YLA RG+P TL +L HD + Y R D + + W + D Sbjct: 153 ---TTLRARRLGNQRKILCASPIYLAARGKPHTLADLADHDLLTYCRNDRNMA-WTLPDA 208 Query: 178 DQPVVRQHAEGRIILGQAEAQVAAVQAGLGIAQLATWVVEQALREGSLVAILPAHVTQGL 237 +V R+ E G+G+A L W++ + ++ G L+ I + + Sbjct: 209 TGALVDIPITSRLRCNDLEVIADTAVDGMGVAWLPYWLLMERMQRGELIGIWGDRPSAVM 268 Query: 238 PLHIVWQRSREHSAKVRAAVG 258 H+VW ++ + R A+ Sbjct: 269 ECHVVWPAAQHVPLRSRLAIN 289 >RSp1110 [K] COG0583 Transcriptional regulator Rso Ralstonia solanacearum Length = 315 Score = 144 bits (363), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 88/259 (33%), Positives = 141/259 (54%), Gaps = 6/259 (2%) Query: 1 VGKAVARLEERLKRPLLQRGRRRVELTDAGDAFYQVCVRVLDELKSAEDMLASDELAPSG 60 V V LE L LL R RRV +T G A+Y+ CVR+L +L+ E + G Sbjct: 33 VTNLVQSLEAHLGVRLLHRTTRRVNVTADGAAYYERCVRILGDLEETEAAFSQSASGARG 92 Query: 61 RLRVDMPATFGRLRGMDSLLAFAEKHPQVTPQVSFTDRFVDLVEEGLDVVVRIGGGDVWP 120 LR+D+P + G+ + + F + +P + ++ +DR VDLV+EG+D VR+ G++ Sbjct: 93 TLRIDVPGSIGKRLLVPRIRDFHDAYPGLQLEIGMSDRTVDLVQEGVDCAVRV--GELQD 150 Query: 121 ATLGYTCLGHEELVFCAAPSYLARRGEPRTLEELQIHDAVLY-ARADGSSSPW-LIKDGD 178 +TL +G +V CA+P YL R G PR+LE+LQ H AV Y + +G W + DG Sbjct: 151 STLVARRIGQLSMVNCASPDYLERYGTPRSLEDLQDHIAVNYFSPRNGRRMDWDFVIDGQ 210 Query: 179 QPVVRQHAEGRIILGQAEAQVAAVQAGLGIAQLATWVVEQALREGSLVAILPAHVTQGLP 238 + + + + AE+ +A GLG+ Q A + + L+ G LV +LP ++++ LP Sbjct: 211 KQI--HKVRSLVSVNDAESAMACALHGLGLLQTARLLAYEHLQSGQLVEVLPDYISEPLP 268 Query: 239 LHIVWQRSREHSAKVRAAV 257 + +++ +R S KVR V Sbjct: 269 VSVIYPHNRHLSPKVRVFV 287