BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0015.0210.p (207 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value YPO1768 [GEPR] COG0477 Permeases of the major facilitator superf... 124 2e-28 STM1107 [GEPR] COG0477 Permeases of the major facilitator superf... 120 2e-27 RSp0182 [GEPR] COG0477 Permeases of the major facilitator superf... 120 2e-27 RSc2352 [GEPR] COG0477 Permeases of the major facilitator superf... 109 5e-24 SSO3079 [GEPR] COG0477 Permeases of the major facilitator superf... 108 6e-24 >YPO1768 [GEPR] COG0477 Permeases of the major facilitator superfamily Ype Yersinia pestis Length = 455 Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 66/188 (35%), Positives = 104/188 (55%), Gaps = 2/188 (1%) Query: 8 ASAWSALKDLRVLALALIYFGTSAGLYTLGLWAPLMIREFGFTP--FQTGLLSGVPSVVA 65 ++ W + VL L YF + L + +W P +++ F + GLL+ +P V Sbjct: 257 SAMWREIFTPVVLMYTLAYFCLTNTLSAVNIWTPQILQSFNQSSSNITIGLLAAIPQVCT 316 Query: 66 VVAMVWWARHSDRSGERTWHVVIPCVVACIGFVLAGNAMTALFVVLSLVVVNVGISSAKA 125 + M+WW+R SDR ER H V+P + A G+VLA ++ +L +++ + G +A A Sbjct: 317 IAGMIWWSRRSDRVQERKMHTVLPYLFAAAGWVLASATQNSVIQLLGIIMASTGSFTAMA 376 Query: 126 PLWAMPSTFLSGAGAAAGIAMINSLGNLGGFVGPFAIGWLKNRTGGYAAGLYVVAATLAV 185 W P +S A GIA+IN+ GN+G V P IGWLK++TG + +GLY VA L + Sbjct: 377 IFWTTPDQSISLRARAVGIAVINATGNIGSAVSPVLIGWLKDQTGNFNSGLYFVAGLLVI 436 Query: 186 SAVVTLLL 193 AV+ L++ Sbjct: 437 GAVIFLMI 444 >STM1107 [GEPR] COG0477 Permeases of the major facilitator superfamily Sty Salmonella typhimurium LT2 Length = 458 Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 67/193 (34%), Positives = 104/193 (53%), Gaps = 2/193 (1%) Query: 9 SAWSALKDLRVLALALIYFGTSAGLYTLGLWAPLMIREF--GFTPFQTGLLSGVPSVVAV 66 S W + VL L YF + L + +W P +++ F G + GLL+ +P + + Sbjct: 261 SLWREVFTPIVLMYTLAYFCLTNTLSAISIWTPQILKSFNEGSSNITIGLLAAIPQICTI 320 Query: 67 VAMVWWARHSDRSGERTWHVVIPCVVACIGFVLAGNAMTALFVVLSLVVVNVGISSAKAP 126 + M++W+RHSD+ ER H +P + A G++LA L +L +V+ + G SA A Sbjct: 321 LGMIYWSRHSDKHQERKHHTALPFLFAAAGWLLASATDHNLIQLLGIVMASTGSFSAMAI 380 Query: 127 LWAMPSTFLSGAGAAAGIAMINSLGNLGGFVGPFAIGWLKNRTGGYAAGLYVVAATLAVS 186 W P +S A GIA+IN+ GN+G + PF IGWLK+ TG + +GL+ VA+ L V Sbjct: 381 FWTTPDQSISLRARAIGIAVINATGNIGSALSPFMIGWLKDITGSFNSGLWFVASLLVVG 440 Query: 187 AVVTLLLARNTRR 199 A + L+ R Sbjct: 441 AAIIWLIPMKASR 453 >RSp0182 [GEPR] COG0477 Permeases of the major facilitator superfamily Rso Ralstonia solanacearum Length = 453 Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 80/191 (41%), Positives = 107/191 (56%), Gaps = 2/191 (1%) Query: 18 RVLALALIYFGTSAGLYTLGLWAPLMIREFG--FTPFQTGLLSGVPSVVAVVAMVWWARH 75 RVL LA IYF G +G W P +I+ F + + GL++ +P V A M+WW+R Sbjct: 262 RVLYLAFIYFVYQCGSLGIGYWMPQIIKGFSSALSHTEVGLIAMLPYVFATAVMIWWSRR 321 Query: 76 SDRSGERTWHVVIPCVVACIGFVLAGNAMTALFVVLSLVVVNVGISSAKAPLWAMPSTFL 135 SD ER H +P VA + FV AG + L + G+ + K+P WA+P+ FL Sbjct: 322 SDLRAERRLHSAVPLGVAALAFVGAGFIGHPAVAMAMLSLSLAGLYAFKSPFWALPTLFL 381 Query: 136 SGAGAAAGIAMINSLGNLGGFVGPFAIGWLKNRTGGYAAGLYVVAATLAVSAVVTLLLAR 195 + + AA IA+INS+GNLGGFVGPFAIG+ K + AGL +A LAVS V+TL L Sbjct: 382 TRSTAAVSIAVINSVGNLGGFVGPFAIGYFKGQMHSTTAGLLFLAGLLAVSFVMTLRLRV 441 Query: 196 NTRRAAVVEQG 206 A QG Sbjct: 442 TEAHAPDRPQG 452 >RSc2352 [GEPR] COG0477 Permeases of the major facilitator superfamily Rso Ralstonia solanacearum Length = 442 Score = 109 bits (272), Expect = 5e-24, Method: Compositional matrix adjust. Identities = 80/185 (43%), Positives = 118/185 (63%), Gaps = 3/185 (1%) Query: 18 RVLALALIYFGTSAGLYTLGLWAPLMIREFGF-TPFQTGLLSGVPSVVAVVAMVWWARHS 76 RV ++LIYF GLY + W P +I++ G P GLL+ +P AVVAMV AR + Sbjct: 258 RVWLMSLIYFSFVMGLYGVSFWLPTLIKQTGVADPLSVGLLTAIPYGAAVVAMVLVARSA 317 Query: 77 DRSGERTWHVVIPCVVACIGFVLAGNAMTALFVVLS-LVVVNVGISSAKAPLWAMPSTFL 135 DR+ ER WH+ IP + IG VL+ T + ++ L + +GI + W++P+ FL Sbjct: 318 DRTRERRWHIAIPALAGAIGLVLSAVWHTNTTLAMAALTLGTMGILTTLPLFWSLPTAFL 377 Query: 136 SGAGAAAGIAMINSLGNLGGFVGPFAIGWLKNRTGGYAAGLYVVAATLAVSAVVTL-LLA 194 +G GAAAGIA+INSLGNL GF+ P+A+GWLK+ T +G+Y++AA++ + A++TL + A Sbjct: 378 AGTGAAAGIALINSLGNLAGFLSPYAVGWLKDTTRSTDSGMYLLAASMVLGALLTLSVPA 437 Query: 195 RNTRR 199 R R Sbjct: 438 RTVNR 442 >SSO3079 [GEPR] COG0477 Permeases of the major facilitator superfamily Sso Sulfolobus solfataricus Length = 423 Score = 108 bits (271), Expect = 6e-24, Method: Compositional matrix adjust. Identities = 72/189 (38%), Positives = 107/189 (56%), Gaps = 6/189 (3%) Query: 12 SALKDLRVLALALIYFGTSAGLYTLGLWAPLMIREFG-FTPFQTGLLSGVPSVVAVVAMV 70 AL DL V+ LA++YF LY +W P +I G LS VP V+A ++++ Sbjct: 237 KALADLNVILLAIVYFLGVTSLYGYSIWLPSIISFIGKVNATIASFLSIVPYVIASISLI 296 Query: 71 WWARHSDRSGERTWHVVIPCVVACIGFVLAGNAMTALFVVLSLV---VVNVGISSAKAPL 127 AR++DR + +VA IG LA +A T +LS + + +GI S A Sbjct: 297 LIARYADRRQNHRFVTFAVFLVAGIG--LALSAATQSIFILSFMLFAIAAIGIYSFIATF 354 Query: 128 WAMPSTFLSGAGAAAGIAMINSLGNLGGFVGPFAIGWLKNRTGGYAAGLYVVAATLAVSA 187 WA+P +LSG AAA I +IN++GNLGG GP +G+LK+ TG + G+YV+A ++ Sbjct: 355 WAVPQGYLSGDAAAAAIGLINAIGNLGGIAGPIVVGFLKSYTGSFVDGIYVMALFSILAG 414 Query: 188 VVTLLLARN 196 V+TLL+ R+ Sbjct: 415 VITLLIRRS 423