BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0015.0194.p         (196 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

RSc2433 [MG] COG0451 Nucleoside-diphosphate-sugar epimerases Rso...   115   4e-26

>RSc2433 [MG] COG0451 Nucleoside-diphosphate-sugar epimerases Rso Ralstonia
           solanacearum
          Length = 341

 Score =  115 bits (289), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 78/172 (45%), Positives = 93/172 (54%), Gaps = 40/172 (23%)

Query: 1   VKKLGLPRVLILGCGDVGLRLVPLLLPRYRVLAVTSNPGRRAELRAAGAIPIVADLDAPL 60
            +KLG PR+LI+GCGDVG R + +L  R+RVLAVTS    RA L+AAGA+P++ADLD   
Sbjct: 13  TRKLGRPRILIVGCGDVGQRCLAVLQSRFRVLAVTSREAGRAPLQAAGAVPVLADLDRIG 72

Query: 61  TLGRLARLAPTIVHLAPPQSEGRIDRRTRNLAA--------------------------- 93
           TL RL  LAP ++HLAPP + G  D RT  L                             
Sbjct: 73  TLRRLRGLAPRVLHLAPPPAAGTDDPRTAALLQALSRPGRLRAAGPAKAGSAASRGMKRR 132

Query: 94  ILPEGAR-------------LVYVSTTGVYGDCAGASFDETRSVRPQNARAV 132
           ILPE                LVY ST+GVYGDC GA  DETR VRP   RA+
Sbjct: 133 ILPERRSGTGRLKSRLQPRTLVYASTSGVYGDCGGAWVDETRPVRPATPRAM 184