BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0015.0193.p (267 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value RSc2434 [HC] COG0543 2-polyprenylphenol hydroxylase and related ... 329 4e-90 YPO3116 [HC] COG0543 2-polyprenylphenol hydroxylase and related ... 205 8e-53 NMB1359 [HC] COG0543 2-polyprenylphenol hydroxylase and related ... 193 3e-49 NMA1571 [HC] COG0543 2-polyprenylphenol hydroxylase and related ... 189 4e-48 STM2093 [HC] COG0543 2-polyprenylphenol hydroxylase and related ... 153 4e-37 >RSc2434 [HC] COG0543 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases Rso Ralstonia solanacearum Length = 349 Score = 329 bits (844), Expect = 4e-90, Method: Compositional matrix adjust. Identities = 158/250 (63%), Positives = 187/250 (74%), Gaps = 6/250 (2%) Query: 1 MSFQVTVQPSGRQFSCDASESILTAAIRAGVGLPYGCKNGACGSCKGKLVSGEVEHGPHQ 60 M++Q+ V PSGRQF + E+IL AA+R G+GLPYGCKNGACGSCKG + G + G H Sbjct: 1 MAYQINVLPSGRQFQAEDGETILAAALRQGIGLPYGCKNGACGSCKGHVREGSIVQGNHS 60 Query: 61 VRALSEHEQQLGHALFCVAKPHSDVTIEAREVAGVGEIPVRKLPVRVAKLDKVADDVIIL 120 AL+ E G ALFC A P SDVTIE REV G G++P++K+P RVA L+K A DV I+ Sbjct: 61 PNALTAQEATEGRALFCCATPASDVTIEVREVHGAGDVPIKKIPCRVASLEKAAPDVTIV 120 Query: 121 SLQLPANDRLQYKAGQYVEFLLRDGKRRSYSMATAPHKDEHMSLHIRHLQGGLFTDQVF- 179 LQLPA +R+Q+ AGQYVEF+LRDGKRRSYS+A PH D + LHIRH+ GG FTD VF Sbjct: 121 KLQLPATERMQFLAGQYVEFILRDGKRRSYSLANPPHADGPVELHIRHMPGGAFTDYVFG 180 Query: 180 -----TTLKERDILRIEGPLGTFFLREDSDKPIILLASGTGFAPIKAIVEQLEHAGSKRP 234 +KERDILR EGPLG+FFLRE SDKPIILLASGTGFAPIKAI+E G +RP Sbjct: 181 AKEGQPAMKERDILRFEGPLGSFFLREASDKPIILLASGTGFAPIKAIIEHAAFVGIQRP 240 Query: 235 VTLYWGGRRP 244 +TLYWGGRRP Sbjct: 241 MTLYWGGRRP 250 >YPO3116 [HC] COG0543 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases Ype Yersinia pestis Length = 329 Score = 205 bits (522), Expect = 8e-53, Method: Compositional matrix adjust. Identities = 98/240 (40%), Positives = 155/240 (64%), Gaps = 4/240 (1%) Query: 1 MSFQVTVQPSGRQFSCDASESILTAAIRAGVGLPYGCKNGACGSCKGKLVSGEVEHGPHQ 60 MS V + PSG F+ D + +IL AA+ + + + Y CK+G CGSCK L+SGEV+ + Sbjct: 1 MSLNVKLHPSGIIFTSDGTSTILDAALDSNIHIEYSCKDGTCGSCKAILISGEVDSAENT 60 Query: 61 VRALSEHEQQLGHALFCVAKPHSDVTIEAREVAGVGEIPVRKLPVRVAKLDKVADDVIIL 120 L+E + G L C +K SD+ ++ + I + P ++ ++ + +D+ IL Sbjct: 61 F--LTEEDVAKGAILTCCSKAKSDIELDVNYYPELSHIQKKTYPCKLDSIEFIGEDIAIL 118 Query: 121 SLQLPANDRLQYKAGQYVEFLLRDGKRRSYSMATAPHKDEHMSLHIRHLQGGLFTDQVFT 180 SL+LP ++QY AGQY++ ++ +G+RRSYS+A AP + ++ LH+R + G+F++ +F Sbjct: 119 SLRLPPTAKIQYLAGQYIDLII-NGQRRSYSIANAPGGNGNIELHVRKVVNGVFSNIIFN 177 Query: 181 TLKERDILRIEGPLGTFFLREDSDKPIILLASGTGFAPIKAIVEQLEHAGSKRPVTLYWG 240 LK + +LRIEGP GTFF+RED + PI+ LA GTGFAP+K++VE L + +R V +YWG Sbjct: 178 ELKLQQLLRIEGPQGTFFVRED-NLPIVFLAGGTGFAPVKSMVEALINKNDQRQVHIYWG 236 >NMB1359 [HC] COG0543 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases Nme Neisseria meningitidis MC58 Length = 336 Score = 193 bits (491), Expect = 3e-49, Method: Compositional matrix adjust. Identities = 102/245 (41%), Positives = 148/245 (60%), Gaps = 6/245 (2%) Query: 1 MSFQVTVQPSGRQFSCDASESILTAAIRAGVGLPYGCKNGACGSCKGKLVSGEVEHGPHQ 60 M+ VT+ P F+ + E++LTAA R + LP+ CK+G CG CK +LVSG+++ G H Sbjct: 1 MNHTVTL-PDQTTFAANDGETVLTAAARQNLNLPHSCKSGVCGQCKAELVSGDIQMGGHS 59 Query: 61 VRALSEHEQQLGHALFCVAKPHSDVTIEAREVAGVGEIPVRKLPVRVAKLDKVADDVIIL 120 +ALSE E+ G L C SD+ I +PVR LP R+ + DV +L Sbjct: 60 EQALSEAEKAQGKILMCCTTAQSDININIPGYKA-DALPVRTLPARIESI-IFKHDVALL 117 Query: 121 SLQLPANDRLQYKAGQYVEFLLRDGKRRSYSMATAPHKDEHMSLHIRHLQGGLFTDQVFT 180 L LP + AGQY++ LL RSYS+A P ++ + LHIR + G+ ++ +F Sbjct: 118 KLALPKAPPFAFYAGQYIDLLLPGNVSRSYSIANLPDQEGILELHIRRHENGVCSEMIFG 177 Query: 181 T---LKERDILRIEGPLGTFFLREDSDKPIILLASGTGFAPIKAIVEQLEHAGSKRPVTL 237 + +KE+ I+R++GPLG+F L+EDS KP+ILLA+GTG+API++I+ L GS R V Sbjct: 178 SEPKVKEKGIVRVKGPLGSFTLQEDSGKPVILLATGTGYAPIRSILLDLIRQGSNRAVHF 237 Query: 238 YWGGR 242 YWG R Sbjct: 238 YWGAR 242 >NMA1571 [HC] COG0543 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases NmA Neisseria meningitidis Z2491 Length = 336 Score = 189 bits (481), Expect = 4e-48, Method: Compositional matrix adjust. Identities = 101/247 (40%), Positives = 149/247 (60%), Gaps = 10/247 (4%) Query: 1 MSFQVTVQPSGRQFSCDASESILTAAIRAGVGLPYGCKNGACGSCKGKLVSGEVEHGPHQ 60 M+ +T+ P F+ E++L AA R + LP+ CK+G CG CK +LVSG+++ G H Sbjct: 1 MNHTITL-PDQTTFAAGDGETVLAAAARQNLNLPHSCKSGVCGQCKAELVSGDIQMGGHS 59 Query: 61 VRALSEHEQQLGHALFCVAKPHSDVTIEAREVAG--VGEIPVRKLPVRVAKLDKVADDVI 118 +ALSE E+ G L C SD++I + G +PVR LP R+ + DV Sbjct: 60 EQALSEAEKAQGKILMCCTTAQSDISIN---IPGYKADALPVRTLPARIENI-IFKHDVA 115 Query: 119 ILSLQLPANDRLQYKAGQYVEFLLRDGKRRSYSMATAPHKDEHMSLHIRHLQGGLFTDQV 178 +L L LP + AGQY++ LL RSYS+A P ++ + LHIR + G+ ++ + Sbjct: 116 LLKLALPKAPPFAFYAGQYIDLLLPGNVSRSYSIANPPDQEGILELHIRRRENGVCSEMI 175 Query: 179 FTT---LKERDILRIEGPLGTFFLREDSDKPIILLASGTGFAPIKAIVEQLEHAGSKRPV 235 F + +KE+ I+R++GPLG+F L+EDS KP+ILLA+GTG+API++I+ L GS R V Sbjct: 176 FGSEPKVKEKGIVRVKGPLGSFTLQEDSGKPVILLATGTGYAPIRSILLDLIRQGSSRVV 235 Query: 236 TLYWGGR 242 YWG R Sbjct: 236 HFYWGAR 242 >STM2093 [HC] COG0543 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases Sty Salmonella typhimurium LT2 Length = 330 Score = 153 bits (386), Expect = 4e-37, Method: Compositional matrix adjust. Identities = 88/240 (36%), Positives = 132/240 (55%), Gaps = 9/240 (3%) Query: 1 MSFQVTVQPSGRQFSCDASESILTAAIRAGVGLPYGCKNGACGSCKGKLVSGEVEHGPHQ 60 MS + + PS +FS ESIL AA+ AG+ L + CK G CG C+ L++GEV Sbjct: 1 MSHIIKIFPSNIEFSGREDESILDAALSAGIHLEHSCKAGDCGICESDLLAGEVVDSKGN 60 Query: 61 VRALSEHEQQLGHALFCVAKPHSDVTIEAREVAGVGEIPVRKLPVRVAKLDKVADDVIIL 120 + Q L C KP + + + A + + +P +V V+ DV+ L Sbjct: 61 IFG------QGDKILTCCCKPKTALELNAHFFPELAGQTKKIVPCKVNSAVLVSGDVMTL 114 Query: 121 SLQLPANDRLQYKAGQYVEFLLRDGKRRSYSMATAPHKDEHMSLHIRHLQGGLFTDQVFT 180 L+ P ++ + GQY+ L G RSYS+A + + + LH+R++ G + +F Sbjct: 115 KLRTPPTAKIGFLPGQYIN-LHYKGVTRSYSIANSDESNG-IELHVRNVPNGQMSSLIFG 172 Query: 181 TLKERDILRIEGPLGTFFLREDSDKPIILLASGTGFAPIKAIVEQLEHAGSKRPVTLYWG 240 L+E ++RIEGP GTFF+RE SD+PII LA GTGFAP+K++VE L +R + +YWG Sbjct: 173 ELQENTLMRIEGPCGTFFIRE-SDRPIIFLAGGTGFAPVKSMVEHLIQGKCRREIYIYWG 231