BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0015.0184.p (288 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value FN2103 [S] COG3181 Uncharacterized protein conserved in bacteria... 121 2e-27 VC1334 [S] COG3181 Uncharacterized protein conserved in bacteria... 117 3e-26 SMc00499 Non COG 115 1e-25 RSc3088 [S] COG3181 Uncharacterized protein conserved in bacteri... 109 8e-24 SMb20025 Non COG 103 4e-22 >FN2103 [S] COG3181 Uncharacterized protein conserved in bacteria Fnu Fusobacterium nucleatum Length = 308 Score = 121 bits (303), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 81/287 (28%), Positives = 133/287 (46%), Gaps = 5/287 (1%) Query: 1 VPWGAGGGTDATARIIGALLEKDLGQPVNVVNRTGGNGAVGHQAIASAAPDGYTIGIATV 60 + + AGGGTD ARI+ A +K+ Q +VN+ G +G +G+ +A A PDGYTIG + Sbjct: 25 IAYKAGGGTDVGARILMAEAQKNFPQTFVIVNKPGADGEIGYTELAKATPDGYTIGFINL 84 Query: 61 EISM-MHHQGLTKLTPRDLTPLALMNFDPAALTVSTESPYKNFDDLLKAIKANPGKLKAS 119 + + H+ TK D+ P+ +DP L V +S ++ + + KA+P +L S Sbjct: 85 PTFVSLPHERQTKYKIDDVEPIMNHVYDPGVLVVKADSQFQTLAEFVDYAKAHPEELTIS 144 Query: 120 GTGQGGIWHLGLAGMLNDLKVAPNAVRFVPSNGAAPAMVDLAAGGVDIVAASLPEARSLI 179 G G H+G A + + V VP G+ + L G V+ A + E SL+ Sbjct: 145 NNGTGASNHIGAAHFAKEAGI---QVTHVPFGGSTDMISALRGGHVNATVAKISEVASLV 201 Query: 180 DAGKATPLVIMANEPAALYPKVPTLKSLTGSTWTNGAWRGIVGPKGLPADVQGKLSASLK 239 +G+ L + VPTL +G G+ R IV PKG P ++ KL K Sbjct: 202 KSGELKLLASFTENRLEGFEDVPTLTE-SGYPVIFGSARAIVAPKGTPKEIIQKLHDVFK 260 Query: 240 KIYDSKEYKDFMSGRGFGTQYADAAEFGKFMDKSDEDMGAILKTLGM 286 +S + + +Y E +++ ++ + + TLG+ Sbjct: 261 TALESPDNIEKSKNASLPLKYMSPEELAQYIKDQEKYIIETVPTLGI 307 >VC1334 [S] COG3181 Uncharacterized protein conserved in bacteria Vch Vibrio cholerae Length = 323 Score = 117 bits (293), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 87/293 (29%), Positives = 146/293 (49%), Gaps = 8/293 (2%) Query: 1 VPWGAGGGTDATARIIG-ALLEKDLGQPVNVVNRTGGNG--AVGHQAIASAAPDGYTIGI 57 VP GAGGG D TAR G AL++ L + N +GG G A+ H I +A T+ I Sbjct: 34 VPGGAGGGWDMTARATGDALMKAKLVGNASYQNLSGGGGGKAIAH-LIETADRQQDTLMI 92 Query: 58 ATVEISMMHHQGLTKLTPRDLTPLALMNFDPAALTVSTESPYKNFDDLLKAIKANPGKLK 117 + I + G+ + RDLTP+A + D A V+ +S Y +++ ++ KANP ++K Sbjct: 93 NSTPIVIRSLSGVFPQSFRDLTPVAEIVSDYGAFVVAGDSKYTSWEQVVADFKANPKQIK 152 Query: 118 -ASGTGQGGIWHLGLAGMLNDLKVAPNAVRFVPSNGAAPAMVDLAAGGVDIVAASLPEAR 176 A G+ +G + HL A + P VR+V + AM L +G +++ L E Sbjct: 153 IAGGSARGSMDHLVAAAAFKGQGLDPKEVRYVAYDAGGSAMTALLSGETQVLSTGLGEVL 212 Query: 177 SLIDAGKATPLVIMANEPAALYPKVPTLKSLTG-STWTNGAWRGIVGPKGLPADVQGKLS 235 + +G+ L I + + + P +PTL +T+ N WRG G+ A+ + + Sbjct: 213 EMSKSGQVRVLAITSPKRLDIAPDIPTLADYGNPTTFVN--WRGYFAAPGVSAEKVAEWN 270 Query: 236 ASLKKIYDSKEYKDFMSGRGFGTQYADAAEFGKFMDKSDEDMGAILKTLGMAR 288 KK++ S+E+K G+ Y EF F+++ ++ MG +++ LG + Sbjct: 271 EVFKKMFASEEWKVIRDRNGWIDSYKGDKEFYAFLEEQEKQMGDLMRELGFLK 323 >SMc00499 Non COG Length = 318 Score = 115 bits (288), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 84/287 (29%), Positives = 133/287 (46%), Gaps = 12/287 (4%) Query: 1 VPW-GAGGGTDATARIIGALLEKDLGQPVNVVNRTGGNGAVGHQAIASAAPDGYTIGIAT 59 V W GAGG D R + LLEK+ G V V NR GG+GAVG I + DGY I + T Sbjct: 34 VVWAGAGGALDTYGRKLAELLEKEAGWTVKVDNRPGGSGAVGVSQIMTQPADGYNILVLT 93 Query: 60 VEISMMHHQGLTKLTPRDLTPLALMNFDPAALTVSTESPYKNFDDLLKAIKANPGKLKAS 119 ++ QGL D L M +P++L V ++S +K+ DD K +K NP LK Sbjct: 94 GTLTFGIAQGLIPFELEDFRLLRAMQSEPSSLAVLSDSQFKSVDDFTKYMKDNPNGLKVG 153 Query: 120 GTGQGGIWHLGLAGMLNDLKVAPNAVRFVPSNGAAPAMVDLAAGGVDIVAASLPEARSLI 179 G GG L + +K ++P + + + L +D + + + Sbjct: 154 GHAPGGFHQYMLYQL---MKKGGFESGWIPHDASGKVTLGLLGKHLDAAMMTPSTGLAQV 210 Query: 180 DAGKATPLVIMANEPAALYPKVPTLKSLTGSTWTNGAWRGIVGPKGLPADVQGKLSASLK 239 +G+ L + +E +A P VPT K G WRG+ G P D G + A++ Sbjct: 211 KSGEIKLLGVSTDERSAFLPDVPTFKE-QGYDIEGAIWRGVAVKAGTPDDAVGAIQAAVD 269 Query: 240 KIYDSKEYKDFMSGRGFGTQYADAAEFG--KFMDKSDEDMGAILKTL 284 K+ S+++K F + Q+ D+ ++ +F ++ D+ L+ L Sbjct: 270 KVTASEDWKKFQT-----EQFQDSPDWKEEEFTKRAQSDLANQLEFL 311 >RSc3088 [S] COG3181 Uncharacterized protein conserved in bacteria Rso Ralstonia solanacearum Length = 317 Score = 109 bits (272), Expect = 8e-24, Method: Compositional matrix adjust. Identities = 75/256 (29%), Positives = 126/256 (49%), Gaps = 8/256 (3%) Query: 1 VPWGAGGGTDATARIIGALLEKDLGQPVNVVNRTGGNGAVGHQAIASAAPDGYTIGIATV 60 V + GG +D AR +G L LGQPV V NR G G++G A+A +APDGYT+G + V Sbjct: 29 VAYPTGGISDNVARALGEKLAAQLGQPVVVENRAGAGGSIGMDAVAKSAPDGYTLGFSAV 88 Query: 61 E-ISMMHHQGLTKLTP-RDLTPLALMNFDPAALTVSTESPYKNFDDLLKAIKANPGKLKA 118 +++ H G P +D+ P+ + + P L ++ K+F D+L +A PG ++ Sbjct: 89 SPLTLNPHFGKLPYDPQKDIAPVVNVMYAPMILLGTSSFTGKSFADMLAQSRAKPGTIRW 148 Query: 119 SGTGQGGIWHLGLAGMLNDLKVAPNA-VRFVPSNGAAPAMVDLAAGGVDIVAASL-PEAR 176 S +G G + HL L +KV + + +P G + D G V++++ ++ P Sbjct: 149 STSGMGTVGHLA----LEQVKVQAHVDITLIPYKGGGQQLTDALGGQVEVMSTNVGPTLM 204 Query: 177 SLIDAGKATPLVIMANEPAALYPKVPTLKSLTGSTWTNGAWRGIVGPKGLPADVQGKLSA 236 I +GK PL + A P VPT L + + G+ P PA + +L+ Sbjct: 205 QHISSGKLRPLAVGAPHRLDALPTVPTFAELGYAKANMASTFGVFAPAKTPAPIIARLNT 264 Query: 237 SLKKIYDSKEYKDFMS 252 + K + + +D ++ Sbjct: 265 EINKALAAPDLRDRLT 280 >SMb20025 Non COG Length = 325 Score = 103 bits (258), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 82/252 (32%), Positives = 117/252 (46%), Gaps = 25/252 (9%) Query: 1 VPWGAGGGTDATARIIGALLEKDLGQPVNVVNRTGGNGAVGHQAIASAAPDGYTIGIATV 60 VP+ AGG TD AR++ + KDLGQ + V N G G +G +A A PDGYT+ Sbjct: 35 VPFSAGGPTDTVARLVAESMSKDLGQQIIVENVGGAGGTLGAGRVAQADPDGYTL----- 89 Query: 61 EISMMHHQGL--TKLTPRDLTPLALMNFDPAALTVSTESPY-----KNFDD-----LLKA 108 ++HH G+ + R L L F+ L TE P K+F+ L++ Sbjct: 90 ---LLHHIGMATSATLYRKLAYDTLNAFEYVGLV--TEVPMTIVARKDFEPTDLKGLIEH 144 Query: 109 IKANPGKLKASGTGQGGIWHLGLAGMLNDLKVAPNAVRFVPSNGAAPAMVDLAAGGVDIV 168 +KAN + + G G HL GM+ + + VP G PAM DL G VDI+ Sbjct: 145 VKANKDTVTVANAGIGAASHL--CGMMF-MSAIETPLTTVPYKGTGPAMTDLLGGQVDIM 201 Query: 169 AASLPEARSLIDAGKATPLVIMANEPAALYPKVPTLKSLTGSTWTNGAWRGIVGPKGLPA 228 I G + + + ++P +PT + S + G W GI PKG PA Sbjct: 202 CDQTTNTTKQIQGGTIKAYAVTSPQRLKIFPDLPTAEEAGLSGFQVGIWHGIYAPKGTPA 261 Query: 229 DVQGKLSASLKK 240 +V +LS SL+K Sbjct: 262 EVTDRLSKSLQK 273