BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0015.0100.p         (160 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

RSp0103_1 [S] COG3501 Uncharacterized protein conserved in bacte...   117   1e-26
RSc0958_1 [S] COG3501 Uncharacterized protein conserved in bacte...   114   1e-25
RSc1944_1 [S] COG3501 Uncharacterized protein conserved in bacte...   111   6e-25
PA0091 [S] COG3501 Uncharacterized protein conserved in bacteria...    73   3e-13
PA0095 [S] COG3501 Uncharacterized protein conserved in bacteria...    72   4e-13

>RSp0103_1 [S] COG3501 Uncharacterized protein conserved in bacteria Rso
           Ralstonia solanacearum
          Length = 569

 Score =  117 bits (293), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 63/156 (40%), Positives = 93/156 (59%), Gaps = 10/156 (6%)

Query: 15  RQHQRILQLHFVNDDAP----------DVELLINRLDASEALSRDYAYTLELLSDDACIP 64
           +Q  R+L L F  DDAP           V++++ RL+A E L +D+ + L LL+D A + 
Sbjct: 17  QQSNRLLGLSFPKDDAPTATDLRGRSVPVQMVVERLEAQEGLGQDFRFELTLLADSAGLV 76

Query: 65  LEALMGKLLRVALVRADGTQRHFTGYVERFSFLRTDGGIAFYEARLVPWMAFLAARINNR 124
           L  ++GKLL V+LV+ DGT R FTG+V  FS + +D G+A Y A L PW+ F  ARIN+R
Sbjct: 77  LADMLGKLLAVSLVKPDGTLRWFTGHVAEFSLVGSDPGVATYRAVLRPWLWFARARINDR 136

Query: 125 IFHQRNLEGLSAEIFSAYPSHARWDCQLRHDDPSYT 160
           +F  R+L    +EI   Y + A+W   +  +D  +T
Sbjct: 137 VFRDRSLYQQISEILQDYGAWAQWRWAVAGEDAPFT 172


>RSc0958_1 [S] COG3501 Uncharacterized protein conserved in bacteria Rso
           Ralstonia solanacearum
          Length = 591

 Score =  114 bits (285), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 63/156 (40%), Positives = 88/156 (56%), Gaps = 10/156 (6%)

Query: 15  RQHQRILQLHFVNDDAP----------DVELLINRLDASEALSRDYAYTLELLSDDACIP 64
           +Q  R+L L F  DD P           V++++ RL+A E L  D+ + L LL+D A + 
Sbjct: 39  QQSNRLLGLSFPKDDTPTATDPRGRSFPVQMVVERLEAQEGLGEDFRFELTLLADHAGLV 98

Query: 65  LEALMGKLLRVALVRADGTQRHFTGYVERFSFLRTDGGIAFYEARLVPWMAFLAARINNR 124
           L  ++GKLL V+LV+ DGT R FTG+V  FS + +D G+A Y A L PW+ F   RINNR
Sbjct: 99  LADMLGKLLAVSLVKPDGTLRWFTGHVSEFSLVGSDPGVATYRAVLRPWLWFALHRINNR 158

Query: 125 IFHQRNLEGLSAEIFSAYPSHARWDCQLRHDDPSYT 160
           +F  R+L    AEI   Y + A+W       D  +T
Sbjct: 159 VFRDRSLYEQIAEILQDYGAWAQWRWDASGADAPFT 194


>RSc1944_1 [S] COG3501 Uncharacterized protein conserved in bacteria Rso
           Ralstonia solanacearum
          Length = 549

 Score =  111 bits (278), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 60/151 (39%), Positives = 86/151 (56%), Gaps = 10/151 (6%)

Query: 20  ILQLHFVNDDAP----------DVELLINRLDASEALSRDYAYTLELLSDDACIPLEALM 69
           +L L F  DDAP           V++++ RL+A E L +D+ + L LL+D A + L  ++
Sbjct: 1   MLGLSFPKDDAPTATDPRGRSFPVQMVVERLEAQEGLGQDFRFELTLLADHAGLVLADML 60

Query: 70  GKLLRVALVRADGTQRHFTGYVERFSFLRTDGGIAFYEARLVPWMAFLAARINNRIFHQR 129
           GKLL V+LV+ DGT R FTG+V  FS + +D G+A Y A L PW+ F   R+NNR+F  R
Sbjct: 61  GKLLAVSLVKPDGTLRWFTGHVAEFSLVGSDPGVATYRAVLRPWLWFARQRVNNRVFRDR 120

Query: 130 NLEGLSAEIFSAYPSHARWDCQLRHDDPSYT 160
            L    A+I   +   A W   +  DD  +T
Sbjct: 121 TLYQQIADILQGHGDWALWQWDVSGDDVPFT 151


>PA0091 [S] COG3501 Uncharacterized protein conserved in bacteria Pae
           Pseudomonas aeruginosa
          Length = 643

 Score = 73.2 bits (178), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 40/110 (36%), Positives = 63/110 (57%), Gaps = 1/110 (0%)

Query: 30  APDVELLINRLDASEALSRDYAYTLELLSDDACIPLEALMGKLLRVALVRADGTQRHFTG 89
            PDV LL+ R++  E L R +AY L L+S++  +PLE L+GK + ++L    G++R F G
Sbjct: 14  GPDV-LLLQRMEGREELGRLFAYELHLVSENPNLPLEQLLGKPMSLSLELPGGSRRFFHG 72

Query: 90  YVERFSFLRTDGGIAFYEARLVPWMAFLAARINNRIFHQRNLEGLSAEIF 139
            V R S +   G  A Y+A L PW   L    + RIF  +++  +  ++F
Sbjct: 73  IVARCSQVAGHGQFAGYQATLRPWPWLLTRTSDCRIFQNQSVPEIIKQVF 122


>PA0095 [S] COG3501 Uncharacterized protein conserved in bacteria Pae
           Pseudomonas aeruginosa
          Length = 741

 Score = 72.4 bits (176), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 42/120 (35%), Positives = 66/120 (55%), Gaps = 2/120 (1%)

Query: 22  QLHFVNDDAP-DVELL-INRLDASEALSRDYAYTLELLSDDACIPLEALMGKLLRVALVR 79
           Q   V  D+P   E+L + R++  E L R +AY LEL+S++  +PL+ L+GK   +AL  
Sbjct: 6   QTRLVRVDSPLGAEVLQLQRMEGREELGRPFAYELELISENPDLPLDGLLGKPASLALEL 65

Query: 80  ADGTQRHFTGYVERFSFLRTDGGIAFYEARLVPWMAFLAARINNRIFHQRNLEGLSAEIF 139
            DG++RHF G V   S    +G  A Y+  L PW+  L    + RIF  + +  +  ++F
Sbjct: 66  HDGSRRHFHGIVAACSQGSGNGQFASYQVTLRPWLWLLTRTSDCRIFQNQKVPDIIKQVF 125