BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0015.0098.p         (133 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

RSp0103_2 Non COG                                                      89   3e-18
YPO0970_2 [S] COG4253 Uncharacterized protein conserved in bacte...    87   8e-18
RSc0958_2 Non COG                                                      87   9e-18
RSc1944_2 Non COG                                                      86   2e-17
YPO0967 [S] COG4253 Uncharacterized protein conserved in bacteri...    86   2e-17

>RSp0103_2 Non COG
          Length = 316

 Score = 88.6 bits (218), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 47/107 (43%), Positives = 71/107 (66%), Gaps = 3/107 (2%)

Query: 1   VAAGKSFFASAAEKLSLLAYRLGAKLIAASGRVEIQAQNDGMEILAQKVVDIISTRDWIN 60
           +A G+SF ASA + + L AYRLG KL+AASG +++QA  +G+ ILA+  + +   R  IN
Sbjct: 144 IATGRSFLASAKDAIRLFAYRLGLKLVAASGDIDMQALKNGINILAKLEIKMEGKRVEIN 203

Query: 61  LKAKKGIRLNGGGSELVIAE-GITGFTQGAHHVHASDHQTLGPQAKP 106
                G+R+NGGGS + +++ GIT  T GA  VH++D+   GP ++P
Sbjct: 204 --GTDGVRINGGGSYIDVSQSGITHGTNGAFQVHSADYSFSGPDSRP 248


>YPO0970_2 [S] COG4253 Uncharacterized protein conserved in bacteria Ype
           Yersinia pestis
          Length = 211

 Score = 87.0 bits (214), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 48/111 (43%), Positives = 63/111 (56%), Gaps = 1/111 (0%)

Query: 1   VAAGKSFFASAAEKLSLLAYRLGAKLIAASGRVEIQAQNDGMEILAQKVVDIISTRDWIN 60
           V+ GK+FF      LS+   +LG KLIA  GR+ +QAQND ME+LA+K + I ST D I 
Sbjct: 85  VSVGKNFFIGVGNTLSVFVRKLGIKLIANQGRITVQAQNDLMELLARKAITITSTEDEIK 144

Query: 61  LKAKKGIRLNGGGSELVIAEG-ITGFTQGAHHVHASDHQTLGPQAKPAEFP 110
           + AKK I LN GGS + + E  I   T G +   A  +       KP +FP
Sbjct: 145 ITAKKKITLNAGGSYITLDENRIESGTAGEYLTKAGYYGRQEKANKPEDFP 195


>RSc0958_2 Non COG
          Length = 316

 Score = 87.0 bits (214), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 44/107 (41%), Positives = 72/107 (67%), Gaps = 3/107 (2%)

Query: 1   VAAGKSFFASAAEKLSLLAYRLGAKLIAASGRVEIQAQNDGMEILAQKVVDIISTRDWIN 60
           +A+G+SF ASA + + L AYRLG KL+AASG +++QA  +G+ ILA+  + +   R  ++
Sbjct: 144 IASGRSFLASAKDAIRLFAYRLGLKLVAASGDIDMQALKNGINILAKLEIKMEGKR--VD 201

Query: 61  LKAKKGIRLNGGGSELVIAE-GITGFTQGAHHVHASDHQTLGPQAKP 106
           +    G+R+NGGGS + +++ GIT  T G   VH++D+   GP ++P
Sbjct: 202 ITGLDGVRINGGGSYIDVSQAGITSGTNGQFQVHSADYSFSGPDSRP 248


>RSc1944_2 Non COG
          Length = 316

 Score = 86.3 bits (212), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 46/107 (42%), Positives = 68/107 (63%), Gaps = 3/107 (2%)

Query: 1   VAAGKSFFASAAEKLSLLAYRLGAKLIAASGRVEIQAQNDGMEILAQKVVDIISTRDWIN 60
           +A G+SF ASA + + L AYRLG KL+AASG +++QA  +G+ ILA+  + +   R  ++
Sbjct: 144 IATGRSFLASAKDAIRLFAYRLGLKLVAASGDIDMQALKNGINILAKLEIKMEGKR--VD 201

Query: 61  LKAKKGIRLNGGGSEL-VIAEGITGFTQGAHHVHASDHQTLGPQAKP 106
           +     +R+NGGGS + V A GI   T GA  VHA +H   GP ++P
Sbjct: 202 INGTDSVRINGGGSYIDVSAAGIVHGTNGAFQVHAGNHSFAGPDSRP 248


>YPO0967 [S] COG4253 Uncharacterized protein conserved in bacteria Ype
           Yersinia pestis
          Length = 211

 Score = 85.9 bits (211), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 48/111 (43%), Positives = 62/111 (55%), Gaps = 1/111 (0%)

Query: 1   VAAGKSFFASAAEKLSLLAYRLGAKLIAASGRVEIQAQNDGMEILAQKVVDIISTRDWIN 60
           V+ GK+FF      LS+   +LG KLIA  G + +QAQND ME+LA+K + I ST D I 
Sbjct: 85  VSVGKNFFIGVGNTLSVFVRKLGIKLIANQGPITVQAQNDLMELLARKAITITSTEDEIK 144

Query: 61  LKAKKGIRLNGGGSELVIAEG-ITGFTQGAHHVHASDHQTLGPQAKPAEFP 110
           + AKK I LN GGS + + E  I   T G +   A  +  L     P EFP
Sbjct: 145 ITAKKKITLNAGGSYITLDENRIESGTAGEYLTKAGYYGRLDKAKLPTEFP 195