BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0015.0084.p (356 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value RSc1174 [R] COG4174 ABC-type uncharacterized transport system, p... 486 e-137 BMEI1936 [R] COG4174 ABC-type uncharacterized transport system, ... 431 e-120 mll5491 Non COG 427 e-119 SMc02831 [R] COG4174 ABC-type uncharacterized transport system, ... 415 e-115 AGc318 [R] COG4174 ABC-type uncharacterized transport system, pe... 414 e-115 >RSc1174 [R] COG4174 ABC-type uncharacterized transport system, permease component Rso Ralstonia solanacearum Length = 351 Score = 486 bits (1250), Expect = e-137, Method: Compositional matrix adjust. Identities = 246/355 (69%), Positives = 300/355 (84%), Gaps = 5/355 (1%) Query: 3 IWSYILKRVLLMIPTLFGVVAITFAVIQFVPGGPVEQAMLEMKGRGGG-GEASGGGAASG 61 +++Y++KR+LL+IPTL GVV +TF VIQFVPGGPVEQ ++EMKGRG G EASGGG Sbjct: 1 MFAYLIKRLLLLIPTLIGVVTLTFVVIQFVPGGPVEQMLMEMKGRGSGIVEASGGGGME- 59 Query: 62 ASAYRGRQGIDEQRIAEIKQLYGFDKPPVERFWTMLKGFLTFDLGKSFYHHGDVWTLVKS 121 YRGR+G+D ++I EI+ LYGFDK PVER++ ML F FDLG+S++ H VW L+KS Sbjct: 60 ---YRGRRGVDPEKIKEIRALYGFDKGPVERYFLMLGRFARFDLGESYFQHRSVWELIKS 116 Query: 122 KFPVSISIGLWTFLLSYLISVPLGIAKAVREGSRFDTATTGLVLVGYSIPGFVLGVFLLV 181 K PVSISIGLWTF L+YLISVPLGIAKAVR GSRFD ++ +VLVGY+IPGFVLGV LLV Sbjct: 117 KLPVSISIGLWTFFLTYLISVPLGIAKAVRAGSRFDLVSSVIVLVGYAIPGFVLGVLLLV 176 Query: 182 LFAGGSFVQWFPLRGLTSDNWASLSFTGKITDYLWHITLPVFASVIGAFAVITMLTRNTF 241 LF GG+F QWFP+RGLTSDNW LS GK+TDYLWHI LP+ ASV+G+FAVITMLT+N F Sbjct: 177 LFGGGTFFQWFPIRGLTSDNWGQLSLPGKVTDYLWHIALPITASVVGSFAVITMLTKNAF 236 Query: 242 LEEIRKQYVLTARAKGLSERKVLYKHVFRNALIPLVTGFPSAFIASFFAGSLLIETLFSL 301 LEEIRKQYVLTAR+KGLSER+VL+KH+FRNA+IPLVTGFP+AFI +FF GSLLIE LFSL Sbjct: 237 LEEIRKQYVLTARSKGLSERRVLWKHIFRNAMIPLVTGFPAAFIGAFFTGSLLIEKLFSL 296 Query: 302 DGMGLLAYESAIRRDYPVVMGTLYLFTLIGLVVKLVGDLCYVWADPRVQFESLAK 356 DGMGL++YE+ ++RDYPVV+GTLY+FTLIGL +L+ D+CYV DPR+ F ++ + Sbjct: 297 DGMGLMSYEAVVQRDYPVVLGTLYVFTLIGLATRLISDVCYVLVDPRIHFGAIGR 351 >BMEI1936 [R] COG4174 ABC-type uncharacterized transport system, permease component Bme Brucella melitensis Length = 365 Score = 431 bits (1108), Expect = e-120, Method: Compositional matrix adjust. Identities = 204/359 (56%), Positives = 276/359 (76%), Gaps = 11/359 (3%) Query: 5 SYILKRVLLMIPTLFGVVAITFAVIQFVPGGPVEQAMLEMKGRGGGG--EASGGGAASGA 62 +YIL+R+LLM+PTL G++AI+FAV+QF PGGPVE+ + ++ G+GG SG G+ G Sbjct: 3 AYILRRLLLMVPTLLGIMAISFAVVQFAPGGPVERVIAQLSGQGGDALDRLSGAGSDFGQ 62 Query: 63 SA---------YRGRQGIDEQRIAEIKQLYGFDKPPVERFWTMLKGFLTFDLGKSFYHHG 113 SA YRG QG+D Q IA++++ +GFDKPP+ERF ML ++ FD G+S++ Sbjct: 63 SAIDSGSVNSKYRGAQGLDPQFIADLEKQFGFDKPPLERFGQMLWNYMRFDFGRSYFRDI 122 Query: 114 DVWTLVKSKFPVSISIGLWTFLLSYLISVPLGIAKAVREGSRFDTATTGLVLVGYSIPGF 173 V L+K K PVSIS+GLW LSY+IS+PLGI KA+++GSRFDT T+ ++++GY+IP F Sbjct: 123 SVIDLIKEKMPVSISLGLWLTFLSYMISIPLGIRKAIKDGSRFDTWTSAVIIIGYAIPSF 182 Query: 174 VLGVFLLVLFAGGSFVQWFPLRGLTSDNWASLSFTGKITDYLWHITLPVFASVIGAFAVI 233 + + L+V+FAGGSF WFPLRGLTS ++A +++ KI DYLWH+ LPV A V+ AFA Sbjct: 183 LFAILLIVVFAGGSFFDWFPLRGLTSPDFAQMTWFEKIKDYLWHMVLPVTALVLSAFATT 242 Query: 234 TMLTRNTFLEEIRKQYVLTARAKGLSERKVLYKHVFRNALIPLVTGFPSAFIASFFAGSL 293 T+LT+N+FLEEIRKQYV TARAKGL+E +VLY+HVFRNA++ ++ GFP AFI++FF GSL Sbjct: 243 TLLTKNSFLEEIRKQYVTTARAKGLTENQVLYRHVFRNAMLIVIAGFPGAFISAFFTGSL 302 Query: 294 LIETLFSLDGMGLLAYESAIRRDYPVVMGTLYLFTLIGLVVKLVGDLCYVWADPRVQFE 352 LIET+FSLDG+GLL Y+S I RDYPVV L++F+LIGL+V L+ DL Y W DPR+ F+ Sbjct: 303 LIETIFSLDGLGLLGYQSVINRDYPVVFANLFIFSLIGLLVGLLSDLTYTWIDPRIDFD 361 >mll5491 Non COG Length = 364 Score = 427 bits (1098), Expect = e-119, Method: Compositional matrix adjust. Identities = 209/358 (58%), Positives = 270/358 (75%), Gaps = 10/358 (2%) Query: 5 SYILKRVLLMIPTLFGVVAITFAVIQFVPGGPVEQAMLEMKGRGGGGE----------AS 54 +YIL+R+LLMIPTLFG++AI+FAVIQF PGGPVEQ + ++ +GG + Sbjct: 3 AYILRRILLMIPTLFGIMAISFAVIQFAPGGPVEQVIAKLTNQGGSDRLGGGGGDAGGTN 62 Query: 55 GGGAASGASAYRGRQGIDEQRIAEIKQLYGFDKPPVERFWTMLKGFLTFDLGKSFYHHGD 114 A +S YRG QG+D + I ++++ +GFDKPP+ERF ML ++ FD G S++ Sbjct: 63 FDVAGDVSSKYRGAQGLDPEFIKKLEKQFGFDKPPLERFGMMLWNYIRFDFGNSYFRDIS 122 Query: 115 VWTLVKSKFPVSISIGLWTFLLSYLISVPLGIAKAVREGSRFDTATTGLVLVGYSIPGFV 174 V L+ K PVSISIGLW LLSYLIS+PLGI KAV++G+ FD T+G+V+VGY+IPGF+ Sbjct: 123 VLDLILEKMPVSISIGLWITLLSYLISIPLGIRKAVKDGTPFDVWTSGVVIVGYAIPGFL 182 Query: 175 LGVFLLVLFAGGSFVQWFPLRGLTSDNWASLSFTGKITDYLWHITLPVFASVIGAFAVIT 234 G+ L+VLFAGGSF WFPLRG+ SDNW LS+ GKI DY WH+TLP+ A V+ AFA T Sbjct: 183 FGIMLMVLFAGGSFWDWFPLRGIVSDNWDQLSWLGKIADYFWHMTLPLTALVLSAFATTT 242 Query: 235 MLTRNTFLEEIRKQYVLTARAKGLSERKVLYKHVFRNALIPLVTGFPSAFIASFFAGSLL 294 +LT+N+FLEEIRKQYV+TARAKGLSER+VLY HVFRNA++ ++ GFP AFI++FF GSLL Sbjct: 243 LLTKNSFLEEIRKQYVVTARAKGLSERQVLYGHVFRNAMLIVIAGFPGAFISAFFTGSLL 302 Query: 295 IETLFSLDGMGLLAYESAIRRDYPVVMGTLYLFTLIGLVVKLVGDLCYVWADPRVQFE 352 IE +FSLDG+GLL + S + RDYPVV LY+F+L+GL V L+ DL Y W DPR+ FE Sbjct: 303 IENIFSLDGLGLLGFRSVVERDYPVVFANLYIFSLLGLFVGLLSDLIYTWVDPRIDFE 360 >SMc02831 [R] COG4174 ABC-type uncharacterized transport system, permease component Sme Sinorhizobium meliloti Length = 360 Score = 415 bits (1066), Expect = e-115, Method: Compositional matrix adjust. Identities = 192/354 (54%), Positives = 264/354 (74%), Gaps = 6/354 (1%) Query: 5 SYILKRVLLMIPTLFGVVAITFAVIQFVPGGPVEQAMLEMKGRGGGGEASGGGA------ 58 +YIL+R+LLMIPT+ G++AI+FAV+QF PGGPVEQ + ++ G SG Sbjct: 3 AYILRRLLLMIPTIVGIMAISFAVVQFAPGGPVEQVISDLTNAAGSDRLSGNAGDLMPVG 62 Query: 59 ASGASAYRGRQGIDEQRIAEIKQLYGFDKPPVERFWTMLKGFLTFDLGKSFYHHGDVWTL 118 YRG QG+D IA++++ +GFDKPP+ERF TM+ ++ FD G+SF+ + V L Sbjct: 63 GGDGGQYRGAQGLDPDFIAKLEKQFGFDKPPLERFVTMMWDYMRFDFGESFFRNTPVIDL 122 Query: 119 VKSKFPVSISIGLWTFLLSYLISVPLGIAKAVREGSRFDTATTGLVLVGYSIPGFVLGVF 178 + K PVSIS+G+W + SY IS+PLGI KAV +GS FD T+G+++VGY++P F+ G+ Sbjct: 123 IIQKMPVSISLGVWILIFSYAISIPLGIKKAVSDGSTFDVWTSGVIIVGYAVPSFLFGIL 182 Query: 179 LLVLFAGGSFVQWFPLRGLTSDNWASLSFTGKITDYLWHITLPVFASVIGAFAVITMLTR 238 L+VLFAGGSF WFPLRGL SDN+ LS+ KI DY WH+TLP+ ++ AFA T+LT+ Sbjct: 183 LIVLFAGGSFFDWFPLRGLVSDNFDQLSWYEKIIDYFWHMTLPLITLLLSAFATTTLLTK 242 Query: 239 NTFLEEIRKQYVLTARAKGLSERKVLYKHVFRNALIPLVTGFPSAFIASFFAGSLLIETL 298 N+F++EI+KQYV TARAKGL+ER+VLY HVFRNA++ ++ GFP AFI++FF GSLLIE + Sbjct: 243 NSFIDEIKKQYVTTARAKGLTERRVLYGHVFRNAMLIIIAGFPGAFISAFFTGSLLIEYI 302 Query: 299 FSLDGMGLLAYESAIRRDYPVVMGTLYLFTLIGLVVKLVGDLCYVWADPRVQFE 352 FSLDG+G L Y++ ++RDYP+V TL++++L+GLVV LV DL Y W DPR+ FE Sbjct: 303 FSLDGLGRLGYDAVVKRDYPIVFATLFIYSLMGLVVSLVSDLIYTWVDPRIDFE 356 >AGc318 [R] COG4174 ABC-type uncharacterized transport system, permease component Atu Agrobacterium tumefaciens strain C58 (Cereon) Length = 364 Score = 414 bits (1064), Expect = e-115, Method: Compositional matrix adjust. Identities = 195/358 (54%), Positives = 266/358 (74%), Gaps = 10/358 (2%) Query: 5 SYILKRVLLMIPTLFGVVAITFAVIQFVPGGPVEQAMLEMKGRG--------GGGEASG- 55 +YIL+R+ LMIPT+ G++ I+F VIQF PGGPVEQ + ++ G+G GGG+ G Sbjct: 3 AYILRRLALMIPTIVGIMGISFLVIQFAPGGPVEQVVAQLTGQGDSASDRLSGGGDLMGQ 62 Query: 56 -GGAASGASAYRGRQGIDEQRIAEIKQLYGFDKPPVERFWTMLKGFLTFDLGKSFYHHGD 114 GG S YRG QG+D + I ++++ +GFDKPP+ RF M+ ++ FD G SF+ + Sbjct: 63 SGGFDESGSKYRGAQGLDPELIKKLEKQFGFDKPPLTRFLEMMWNYIRFDFGDSFFRNSS 122 Query: 115 VWTLVKSKFPVSISIGLWTFLLSYLISVPLGIAKAVREGSRFDTATTGLVLVGYSIPGFV 174 V L+ K PVS S+G W ++SY+IS+PLGI KAV +GS FD T+G++++GY++P F+ Sbjct: 123 VIDLIIDKLPVSASLGFWILIISYVISIPLGIKKAVSDGSTFDVWTSGIIIIGYAVPSFL 182 Query: 175 LGVFLLVLFAGGSFVQWFPLRGLTSDNWASLSFTGKITDYLWHITLPVFASVIGAFAVIT 234 G+ L+VLFAGGSF WFPLRGL SDN+ L++ KI DY WH+TLP+ A + AFA T Sbjct: 183 FGILLIVLFAGGSFFDWFPLRGLVSDNFDQLNWWQKIIDYFWHLTLPLIALSLSAFATTT 242 Query: 235 MLTRNTFLEEIRKQYVLTARAKGLSERKVLYKHVFRNALIPLVTGFPSAFIASFFAGSLL 294 +LT+N+F++EI+KQYV+TARAKGLSERKVLY HVFRNA++ ++ GFP AFI++FF GSLL Sbjct: 243 LLTKNSFIDEIKKQYVVTARAKGLSERKVLYGHVFRNAMLIVIAGFPGAFISAFFTGSLL 302 Query: 295 IETLFSLDGMGLLAYESAIRRDYPVVMGTLYLFTLIGLVVKLVGDLCYVWADPRVQFE 352 IE +FSLDG+G L Y S + RDYP+V GTL++F+L+GLVV L+ DL Y W DPR+ FE Sbjct: 303 IENIFSLDGLGRLGYLSVVNRDYPIVFGTLFIFSLMGLVVGLLSDLIYTWIDPRIDFE 360