BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0015.0063.p (225 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value PA4202 [R] COG2070 Dioxygenases related to 2-nitropropane dioxyg... 203 2e-52 RSp0307 [R] COG2070 Dioxygenases related to 2-nitropropane dioxy... 148 8e-36 SA0781 [R] COG2070 Dioxygenases related to 2-nitropropane dioxyg... 119 8e-27 YJR149w [R] COG2070 Dioxygenases related to 2-nitropropane dioxy... 115 1e-25 BH1205 [R] COG2070 Dioxygenases related to 2-nitropropane dioxyg... 112 7e-25 >PA4202 [R] COG2070 Dioxygenases related to 2-nitropropane dioxygenase Pae Pseudomonas aeruginosa Length = 351 Score = 203 bits (517), Expect = 2e-52, Method: Compositional matrix adjust. Identities = 104/211 (49%), Positives = 139/211 (65%), Gaps = 1/211 (0%) Query: 1 MSNALLQRLGLAHPIIQAPMAGSSTVTMAAAASNAGALGSLALGASSVAQAREALAQLHA 60 M++ + LG+ PIIQAPM G ST +AAA SNAG LGS+A+ S+ + R + ++ Sbjct: 1 MTDRFTRLLGIQQPIIQAPMLGVSTPALAAAVSNAGGLGSIAITGSAAEKGRALIREVRG 60 Query: 61 LTDKPFNVNFFCHQPAVLDAARDAAWISHLQGHLDEFGGSISLPLKEIYQSFIVDTGMQQ 120 LTDKPFNVN FCH+P D AR+ AW+ +L+ EFG + LK IY SF+ D + Sbjct: 61 LTDKPFNVNLFCHRPGQADPARERAWLDYLKPLFAEFGAEPPVRLKNIYLSFLEDPTLLP 120 Query: 121 LVLELPPAVVSFHFGLPDAGVIQSLKNAGVFLMATATNLDEARQIEAAGLDAIVAQGIEA 180 ++LE PA VSFHFG P +++L+ G+ ++ AT +EA +EAAG DA+VAQGIEA Sbjct: 121 MLLEERPAAVSFHFGAPPRDQVRALQAVGIRVLVCATTPEEAALVEAAGADAVVAQGIEA 180 Query: 181 GGHRGIFD-EHKDEEIGTFALVRLLATQCRL 210 GGHRG+F+ E D IGT ALVRLLA + L Sbjct: 181 GGHRGVFEPERGDAAIGTLALVRLLAARGSL 211 >RSp0307 [R] COG2070 Dioxygenases related to 2-nitropropane dioxygenase Rso Ralstonia solanacearum Length = 362 Score = 148 bits (374), Expect = 8e-36, Method: Compositional matrix adjust. Identities = 83/198 (41%), Positives = 117/198 (59%), Gaps = 2/198 (1%) Query: 14 PIIQAPMAGSSTVTMAAAASNAGALGSLALGASSVAQAREALAQLHALTDKPFNVNFFCH 73 PI+ AP+AG V +A A + AG LGSL + Q RE + Q A P N+NFFCH Sbjct: 18 PIVLAPLAGVGGVELAVAVARAGGLGSLPCAMLNADQIREQVGQFRAAVRAPINLNFFCH 77 Query: 74 QPAVLDAARDAAWISHLQGHLDEFGGSISLPLKEIYQSFIVDTGMQQLVLELPPAVVSFH 133 P D R+A W +HL + EFG + + ++ D +V L P VVSFH Sbjct: 78 VPPQPDPEREARWRAHLAPYYAEFGIDPAATAPFVNRAPF-DAAACAVVESLRPEVVSFH 136 Query: 134 FGLPDAGVIQSLKNAGVFLMATATNLDEARQIEAAGLDAIVAQGIEAGGHRGIF-DEHKD 192 FGLP+AG++ ++ AG ++A+AT ++EA +EA G DA++AQG EAGGHRG+F + Sbjct: 137 FGLPEAGLLARVRAAGARILASATTVEEACWLEANGCDAVIAQGAEAGGHRGMFLATAVE 196 Query: 193 EEIGTFALVRLLATQCRL 210 ++GTFALV +A R+ Sbjct: 197 SQVGTFALVPQVADAVRV 214 >SA0781 [R] COG2070 Dioxygenases related to 2-nitropropane dioxygenase Sau Staphylococcus aureus N315 Length = 355 Score = 119 bits (297), Expect = 8e-27, Method: Compositional matrix adjust. Identities = 74/204 (36%), Positives = 116/204 (56%), Gaps = 9/204 (4%) Query: 2 SNALLQRLGLAHPIIQAPMAGSSTVTMAAAASNAGALGSLALGASSVAQAREALAQLHAL 61 N L Q L + +PIIQA MAGS+T + A+ SN+G LG++ G + Q + + + L Sbjct: 4 KNRLTQMLSIEYPIIQAGMAGSTTPKLVASVSNSGGLGTIGAGYFNTQQLEDEIDYVRQL 63 Query: 62 TDKPFNVNFFCHQPAVLDAARDAAWISHLQGHLDEFGGSISL--PLKEIYQSFIVDTGMQ 119 T F VN F P+ + ++ I ++ L + ++ L P+ +I + + Sbjct: 64 TSNSFGVNVFV--PS--QQSYTSSQIENMNAWLKPYRRALHLEEPVVKIIEEQQFKCHID 119 Query: 120 QLVLELPPAVVSFHFGLPDAGVIQSLKNAGVFLMATATNLDEARQIEAAGLDAIVAQGIE 179 ++ + P V F FG+P+ +I+ LK A + L+ TAT++DEA E AG+DAIVAQG E Sbjct: 120 TIIKKQVP-VCCFTFGIPNESIIERLKEANIKLIGTATSVDEAIANEKAGMDAIVAQGSE 178 Query: 180 AGGHRGIFDEHKDE--EIGTFALV 201 AGGHRG F + K++ +GT +LV Sbjct: 179 AGGHRGSFLKPKNQLPMVGTISLV 202 >YJR149w [R] COG2070 Dioxygenases related to 2-nitropropane dioxygenase Sce Saccharomyces cerevisiae Length = 404 Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 75/231 (32%), Positives = 116/231 (50%), Gaps = 36/231 (15%) Query: 1 MSNALLQRLGLAHPIIQAPMAGSSTVTMAAAASNAGALGSLALG------ASSVAQAREA 54 MS + + L L +PIIQAPMAG +T+ MAA A AGA+ SL L + + + + Sbjct: 23 MSRSFQKCLNLRYPIIQAPMAGVTTIEMAAKACIAGAIASLPLSHLDFRKVNDIEKLKLM 82 Query: 55 LAQLH-ALTDKPF----NVNFFCHQPAVLDAARD---AAWISHLQGHLDEFGGSISLPLK 106 ++Q + D+ N+NFFCH ++D D A W + ++ + + + Sbjct: 83 VSQFRDQVADESLEGNLNLNFFCHD--IVDKPTDLQTANWAKLYRKSMN-----VPIDMN 135 Query: 107 EI--------YQSFIVDTGMQQLVLELP----PAVVSFHFGLPDAGVIQSLKNAGVFLMA 154 EI +++F + +Q L P ++SFHFG P I+ L+ G+ + Sbjct: 136 EIKFDNGNVSFKAFEKENALQDFFQYLSDGFRPKIISFHFGHPSKSTIEYLQKIGILIFV 195 Query: 155 TATNLDEARQIEAAGLDAIVAQGIEAGGHRGIF---DEHKDEEIGTFALVR 202 TAT++ E R + G++ IV QG EAGGHRG F D DE + T LV+ Sbjct: 196 TATSVREVRLLARLGINGIVCQGYEAGGHRGNFLVNDPKDDENLSTVQLVK 246 >BH1205 [R] COG2070 Dioxygenases related to 2-nitropropane dioxygenase Bha Bacillus halodurans Length = 365 Score = 112 bits (280), Expect = 7e-25, Method: Compositional matrix adjust. Identities = 78/206 (37%), Positives = 109/206 (52%), Gaps = 10/206 (4%) Query: 1 MSNALLQRLGLAHPIIQAPMAGSSTV-TMAAAASNAGALGSLALGASSVAQAREALAQLH 59 AL +RL + PI+QA MAG T + AA SN G LG++ G +V A+ ++ Sbjct: 2 FQTALCKRLSIEFPIVQAGMAGGPTTPELVAAVSNHGGLGTIGAGYMTVEALEVAIKRIR 61 Query: 60 ALTDKPFNVNFFCHQPAVLDAARDAAWISHLQGHLDEFGGSISL-PLKEIYQSFIVDTGM 118 LTD+PF VN FC D A D + + ++ LD+ ++ L L+E+ + Sbjct: 62 QLTDRPFAVNLFC-----TDWACDYSRLEEVKPVLDQIRANLGLGKLEEVPAGRDMFRDK 116 Query: 119 QQLVLELPPAVVSFHFGLPDAGVIQSLKNAGVFLMATATNLDEARQIEAAGLDAIVAQGI 178 L+L+ V S FGL ++ LK G+ A T + EA++ E G D IVAQG Sbjct: 117 FDLLLKERVPVFSSAFGLLAKHDVERLKEFGILWTAMVTTVGEAQEAEQQGADVIVAQGS 176 Query: 179 EAGGHRGIF--DEHKD-EEIGTFALV 201 +AGGHRG F DE KD IGTF+LV Sbjct: 177 DAGGHRGTFSVDEKKDGASIGTFSLV 202