BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0015.0061.p (286 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value PA2391 [MU] COG1538 Outer membrane protein Pae Pseudomonas aerug... 195 1e-49 PA0427 [MU] COG1538 Outer membrane protein Pae Pseudomonas aerug... 144 2e-34 RSp0817 [MU] COG1538 Outer membrane protein Rso Ralstonia solana... 137 3e-32 PA2525 [MU] COG1538 Outer membrane protein Pae Pseudomonas aerug... 137 3e-32 PA2837 [MU] COG1538 Outer membrane protein Pae Pseudomonas aerug... 136 5e-32 >PA2391 [MU] COG1538 Outer membrane protein Pae Pseudomonas aeruginosa Length = 474 Score = 195 bits (495), Expect = 1e-49, Method: Compositional matrix adjust. Identities = 115/244 (47%), Positives = 171/244 (70%), Gaps = 3/244 (1%) Query: 30 ILANQRQLIPDLQQQEQDAQTALAILLGRPPQNFKVEEKGLAKIQMPRISAGLPSELLTR 89 ++A+QR+ +P L+QQ +A LA L+G P Q +V E+ ++ P AGLPSELL+R Sbjct: 227 LVASQRKQLPLLEQQAHEALITLATLIGEPVQALQVAERPFDSLRWPETGAGLPSELLSR 286 Query: 90 RPDIRRAEANLAAANANVAVARASLFPSISLTGSTGAQSNALLSLFNGPNLFANLGTSLI 149 RPDI AEA LAAA A+V VARA+LFP ++L+ S + +N F P + NLG +L+ Sbjct: 287 RPDIANAEAQLAAAQADVQVARAALFPKLTLSASLSSGANRAADTFRNP--YYNLGANLL 344 Query: 150 APIFDGGNLRNQQALAEAQKEELVQVYRQRVITSLSEVEKALGAIRSLEERYRLKVNEVD 209 APIF+ G LR ++ + A++EEL++ YR+ ++T+ ++ E++L +I L+ + + E++ Sbjct: 345 APIFNHGRLRAERDRSLARQEELLETYRKAILTAFADTERSLNSIDGLDRQLHWQQQELE 404 Query: 210 QARFAFELAEIRYRAGAEDLLVVLDTQRTLSEAQNQLGQIKLQRLQATVSLYKALGGGWQ 269 QA+ AF+L++ RY+AGAE LL VL+TQRTL AQ+ Q++L RLQA+V LYKALGGGWQ Sbjct: 405 QAQRAFDLSDSRYQAGAETLLTVLETQRTLYAAQDAAVQLRLARLQASVGLYKALGGGWQ 464 Query: 270 -DKQ 272 D+Q Sbjct: 465 SDRQ 468 >PA0427 [MU] COG1538 Outer membrane protein Pae Pseudomonas aeruginosa Length = 485 Score = 144 bits (364), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 91/221 (41%), Positives = 127/221 (57%), Gaps = 2/221 (0%) Query: 49 QTALAILLGRP-PQNFKVEEKGLAKIQMPRISAGLPSELLTRRPDIRRAEANLAAANANV 107 Q AL +LLG P N + GL + + + AGLPS+LL RRPDI AE L AANA++ Sbjct: 248 QNALVLLLGSGIPANLP-QGLGLDQTLLTEVPAGLPSDLLQRRPDILEAEHQLMAANASI 306 Query: 108 AVARASLFPSISLTGSTGAQSNALLSLFNGPNLFANLGTSLIAPIFDGGNLRNQQALAEA 167 ARA+ FPSISLT + G S L LF+ + S+ PIF G+LR A+ Sbjct: 307 GAARAAFFPSISLTANAGTMSRQLSGLFDAGSGSWLFQPSINLPIFTAGSLRASLDYAKI 366 Query: 168 QKEELVQVYRQRVITSLSEVEKALGAIRSLEERYRLKVNEVDQARFAFELAEIRYRAGAE 227 QK+ V Y + + T+ EV L A + E+ + + + V + ++LA+ RYR G + Sbjct: 367 QKDINVAQYEKAIQTAFQEVADGLAARGTFTEQLQAQRDLVKASDEYYQLADKRYRTGVD 426 Query: 228 DLLVVLDTQRTLSEAQNQLGQIKLQRLQATVSLYKALGGGW 268 + L +LD QR+L AQ QL +L +L + V+LYKALGGGW Sbjct: 427 NYLTLLDAQRSLFTAQQQLITDRLNQLTSEVNLYKALGGGW 467 >RSp0817 [MU] COG1538 Outer membrane protein Rso Ralstonia solanacearum Length = 491 Score = 137 bits (345), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 79/194 (40%), Positives = 110/194 (56%) Query: 75 MPRISAGLPSELLTRRPDIRRAEANLAAANANVAVARASLFPSISLTGSTGAQSNALLSL 134 + I GL S+LL RRPDI +AE +L AANAN+ ARA+ FPSISLT S G S +L L Sbjct: 281 LATIPPGLASDLLQRRPDILQAEHDLKAANANIGAARAAFFPSISLTASAGTSSASLAGL 340 Query: 135 FNGPNLFANLGTSLIAPIFDGGNLRNQQALAEAQKEELVQVYRQRVITSLSEVEKALGAI 194 F G + + G + PIFDGG R +A A ++ + Y + + T+ EV AL Sbjct: 341 FKGGSGVWSFGPQISLPIFDGGANRANLDIANASRDIALAQYEKAIQTAFREVSDALAQR 400 Query: 195 RSLEERYRLKVNEVDQARFAFELAEIRYRAGAEDLLVVLDTQRTLSEAQNQLGQIKLQRL 254 +L + + + VD +++LA R++ G + L VLD+QR+L AQ L +L RL Sbjct: 401 GTLGRQLDAQQSLVDATSDSYQLATARFKRGVDSYLNVLDSQRSLYTAQQNLINTRLSRL 460 Query: 255 QATVSLYKALGGGW 268 + YK LGGGW Sbjct: 461 TNLATFYKTLGGGW 474 >PA2525 [MU] COG1538 Outer membrane protein Pae Pseudomonas aeruginosa Length = 498 Score = 137 bits (344), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 82/235 (34%), Positives = 131/235 (55%), Gaps = 3/235 (1%) Query: 40 DLQQQEQDAQTALAILLGRPPQNFKVEEKGLAKI-QMPRISAGLPSELLTRRPDIRRAEA 98 DL+ Q + A+A+L+G PP F + +A + ++P + A +PS+LL RRPDI AE Sbjct: 248 DLKYQRAQLEHAIAVLVGLPPAQFNLPP--VASVPKLPDLPAVVPSQLLERRPDIASAER 305 Query: 99 NLAAANANVAVARASLFPSISLTGSTGAQSNALLSLFNGPNLFANLGTSLIAPIFDGGNL 158 + +ANA + VA+A+ FP ++L+ + G +S +L + + PN F ++G +FDGG + Sbjct: 306 KVISANAQIGVAKAAYFPDLTLSAAGGYRSGSLSNWISTPNRFWSIGPQFAMTLFDGGLI 365 Query: 159 RNQQALAEAQKEELVQVYRQRVITSLSEVEKALGAIRSLEERYRLKVNEVDQARFAFELA 218 +Q AEA ++ V YRQ V+ EVE L + L+E ++ ++ AR A LA Sbjct: 366 GSQVDQAEATYDQTVATYRQTVLDGFREVEDYLVQLSVLDEESGVQREALESAREALRLA 425 Query: 219 EIRYRAGAEDLLVVLDTQRTLSEAQNQLGQIKLQRLQATVSLYKALGGGWQDKQV 273 E +Y+AG D V+ Q T + + + RL A+V L A+GGGW + Sbjct: 426 ENQYKAGTVDYTDVVTNQATALSNERTVLTLLGSRLTASVQLIAAMGGGWDSADI 480 >PA2837 [MU] COG1538 Outer membrane protein Pae Pseudomonas aeruginosa Length = 479 Score = 136 bits (343), Expect = 5e-32, Method: Compositional matrix adjust. Identities = 92/240 (38%), Positives = 129/240 (53%), Gaps = 2/240 (0%) Query: 38 IPDLQQQEQDAQTALAILLGRPPQNFKVEEKGLAKIQMP--RISAGLPSELLTRRPDIRR 95 +P++++ + AL L+G P + E I P + GLPSEL RRPDIRR Sbjct: 238 LPEVEKNQAHLVNALGYLVGASPGSLLAELGPARAIPRPPGSVPVGLPSELAQRRPDIRR 297 Query: 96 AEANLAAANANVAVARASLFPSISLTGSTGAQSNALLSLFNGPNLFANLGTSLIAPIFDG 155 AEA L AA A++ VA+A +P I+L G+ G +S L SL + + +G + PIF+G Sbjct: 298 AEARLHAATASIGVAKADFYPRITLNGNFGFESLQLSSLGDWDHRQFAIGPAFSLPIFEG 357 Query: 156 GNLRNQQALAEAQKEELVQVYRQRVITSLSEVEKALGAIRSLEERYRLKVNEVDQARFAF 215 G LR + L EAQ++E Y++ V+ + EV+ A+ + + R V Q R A Sbjct: 358 GRLRGRLELREAQQQEAAIDYQRTVLRAWQEVDDAMHDYAANQRRQERLGEAVAQNRRAL 417 Query: 216 ELAEIRYRAGAEDLLVVLDTQRTLSEAQNQLGQIKLQRLQATVSLYKALGGGWQDKQVPA 275 + A +YRAGA D L VLD+QR L + Q Q V+LYKALGGGW PA Sbjct: 418 QSAREQYRAGAVDFLSVLDSQRQLLDNQEQQVASDEAVSLTLVNLYKALGGGWSPTSDPA 477