BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0015.0044.p (974 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value RSc1251 [L] COG1643 HrpA-like helicases Rso Ralstonia solanacearum 1410 0.0 STM1641 [L] COG1643 HrpA-like helicases Sty Salmonella typhimuri... 1013 0.0 hrpA [L] COG1643 HrpA-like helicases Eco Escherichia coli K12 1011 0.0 ZhrpA [L] COG1643 HrpA-like helicases EcZ Escherichia coli O157:... 1011 0.0 ECs2015 [L] COG1643 HrpA-like helicases Ecs Escherichia coli O15... 1011 0.0 >RSc1251 [L] COG1643 HrpA-like helicases Rso Ralstonia solanacearum Length = 1331 Score = 1410 bits (3650), Expect = 0.0, Method: Compositional matrix adjust. Identities = 710/976 (72%), Positives = 808/976 (82%), Gaps = 43/976 (4%) Query: 3 NPLPPVTFPEELPVSGRRHEIAEALRAHQVIIVSGETGSGKTTQLPKICLELGRGEKG-- 60 N +PP++FPE LPVS RR EIA A+ AHQV+IVSGETGSGKTTQLPKICL +GRG Sbjct: 60 NAVPPISFPEALPVSARRDEIARAVAAHQVVIVSGETGSGKTTQLPKICLSIGRGIGAGG 119 Query: 61 --LIGHTQPRRIAASSTAKRIAQELNSPPGELVGYKVRFNDTLSKGAWIKLMTDGILLAE 118 LIGHTQPRRIAA+STAKRIAQE+ SP GE VGY+VRFNDTLS GA +KLMTDGILLAE Sbjct: 120 TGLIGHTQPRRIAATSTAKRIAQEIGSPLGEHVGYQVRFNDTLSAGASVKLMTDGILLAE 179 Query: 119 TQTDPLLRQYDTIIIDEAHERSLNIDFLLGYLKQLLPKRPDLKIIITSATIDADRFARHF 178 TQ DPLLR YDTIIIDEAHERSLNIDFLLGYLKQLLP+RPDLK+IITSATIDA RFA HF Sbjct: 180 TQNDPLLRGYDTIIIDEAHERSLNIDFLLGYLKQLLPRRPDLKVIITSATIDAQRFAEHF 239 Query: 179 GREVKGELVPAPVIEVSGRLYPVEIRYRPIDNADRSGVSTEVAQARARAEGRASQAQKDR 238 G PAPVIEVSGRLYPVE+RYRP+ + +KD+ Sbjct: 240 A----GPKGPAPVIEVSGRLYPVEVRYRPV-----------------------QRDEKDK 272 Query: 239 EQRDLMDAVVDAVDELARIGSGDVLVFLPGEREIRDAAEALRKHHPPHVEILPLFARLSA 298 E RDL D +VDAVDELAR G+GDVL+FLPGEREIR+AAEALRKHHP H EILPLFARLS Sbjct: 273 E-RDLYDGIVDAVDELAREGAGDVLIFLPGEREIREAAEALRKHHPAHTEILPLFARLSV 331 Query: 299 QEQERVFKTSNARRIVLATNVAETSLTVPGIRYVVDAGLARVKRYSYRNKVEQLQIEPVA 358 QEQERVF+ SNARRIVLATNVAETSLTVPGIRYVVDAGLARVKRYSYRNKVEQLQIEPV+ Sbjct: 332 QEQERVFRPSNARRIVLATNVAETSLTVPGIRYVVDAGLARVKRYSYRNKVEQLQIEPVS 391 Query: 359 QSAANQRAGRCGRVAAGVCIRLYDEQDFLQRPKFTDPEILRSSLASVILRMKSLHLTDVE 418 Q+AANQRAGRCGRVA GVCIRLY+E DF+ RP+FTDPEILRSSLA+VILRMK+L LTDVE Sbjct: 392 QAAANQRAGRCGRVADGVCIRLYEEADFIARPRFTDPEILRSSLAAVILRMKALRLTDVE 451 Query: 419 SFPFIEPPLGRAIADGYQLLQELGAVEEQGGVNRLTALGKQLARLPLDPRVGRMILAGRD 478 FPFIEPPLGRAIADGYQLLQELGAV+++ N LT LGKQ+ARLPLDPRV RMILAGRD Sbjct: 452 QFPFIEPPLGRAIADGYQLLQELGAVDDE---NALTPLGKQVARLPLDPRVARMILAGRD 508 Query: 479 NACLTELLIIAAAVSVQDPRDRPMDAQNAADNAHKKFADEKSEFASYLKIWKWFEEAIAH 538 + CL E+LIIA+A+SVQDPRDRP + Q AD AH++FADEKSEF ++K+WKWFEEA+AH Sbjct: 509 HQCLREMLIIASALSVQDPRDRPQELQQQADQAHRQFADEKSEFLGWVKLWKWFEEAVAH 568 Query: 539 KKSNRQLQEHCRENFLSQLRLREWRDVHSQLLTIVKEQGWRLNEAPATYDQLHLALLTGL 598 KKSN+QLQ+ CR +FLS LRLREWRDVHSQL T V EQGW+LNE+ TY+QLHLALLTGL Sbjct: 569 KKSNKQLQDQCRAHFLSHLRLREWRDVHSQLHTTVAEQGWKLNESEPTYEQLHLALLTGL 628 Query: 599 LGNVGFKSED----DAQYLGARGIKFNIWPGAHLTKKPGRWVMAAELVDTARLYARCVAN 654 LGN+G + E+ +YLGARGIKF +WPG+ + +K G+W++A EL++T+RL+ R +A Sbjct: 629 LGNIGVRIEEADGKGREYLGARGIKFFLWPGSAIARKAGKWMVAGELIETSRLFGRTLAR 688 Query: 655 IQPEWLEKLGGHLLKKSWGEPRWEKRAAQVTASERATLYGLVVYSQRRINYGKINPTEAR 714 I+PEW+EK+G HLLK SW +P WEK+A QV A ER TLYGL VY QRR+++G + P EAR Sbjct: 689 IEPEWVEKVGAHLLKVSWSDPHWEKKAGQVMAFERGTLYGLPVYQQRRVHFGPMQPREAR 748 Query: 715 EIFIRDALVGGDFETRAPFFAHNQKLVREIENLEHKSRRLDVLVDDELIIGFYDKLIPHD 774 E+FIR ALV G+FETR PFFAHNQ+LVREIENLEHKSRR DVLVDDELI FYD IP D Sbjct: 749 ELFIRRALVDGEFETRLPFFAHNQRLVREIENLEHKSRRQDVLVDDELIHAFYDSQIPAD 808 Query: 775 ICNGVDFEKWHKEATAADPKLLYLNRDDLMRHEAAGVTTELFPKTMNVAGIAMALSYHFE 834 I N V FE W+ EA A KLLYLNRDDLMRHEAAG+TT+LFPKT+ +AGI M L+YHFE Sbjct: 809 IHNTVAFEGWYAEAAKASQKLLYLNRDDLMRHEAAGITTDLFPKTLPIAGIDMGLTYHFE 868 Query: 835 PGAARDGVTLTVPLYALNQVSSDRCDWLVPGMLKEKVHLLLKSLPQKLRRHCVPLPDYAA 894 PG+ RDGVTLTVPLYALNQV + R +WLVPGMLKEK HLLLKSLPQKLRRHCVPLPDYAA Sbjct: 869 PGSPRDGVTLTVPLYALNQVPAQRAEWLVPGMLKEKAHLLLKSLPQKLRRHCVPLPDYAA 928 Query: 895 RFCERMEERKTFGRGNLIDAIIADIREQITILVKPSDFKQETLSAHHAMNFKIVDEHGRQ 954 F R+ G G+L+D +IAD+REQ +K +DFK ETL AHH MNFK++DEHGRQ Sbjct: 929 GFVSRVR----LGDGDLLDRLIADVREQTGTPLKRADFKLETLPAHHFMNFKVIDEHGRQ 984 Query: 955 LEMGRNLAALQAEFGG 970 L+MGRNLA L+AE GG Sbjct: 985 LDMGRNLAQLRAELGG 1000 >STM1641 [L] COG1643 HrpA-like helicases Sty Salmonella typhimurium LT2 Length = 1300 Score = 1013 bits (2618), Expect = 0.0, Method: Compositional matrix adjust. Identities = 496/967 (51%), Positives = 679/967 (70%), Gaps = 39/967 (4%) Query: 6 PPVTFPEELPVSGRRHEIAEALRAHQVIIVSGETGSGKTTQLPKICLELGRGEKGLIGHT 65 P +T+P+ LPVS ++ +I EA+R HQV+IV+GETGSGKTTQLPKIC+ELGRG KGLIGHT Sbjct: 69 PSITYPQNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGLIGHT 128 Query: 66 QPRRIAASSTAKRIAQELNSPPGELVGYKVRFNDTLSKGAWIKLMTDGILLAETQTDPLL 125 QPRR+AA + A RIA+EL + PG +GYKVRF+D +S +KLMTDGILLAE Q D LL Sbjct: 129 QPRRLAARTVANRIAEELQTEPGGCIGYKVRFSDHVSSNTMVKLMTDGILLAEIQQDRLL 188 Query: 126 RQYDTIIIDEAHERSLNIDFLLGYLKQLLPKRPDLKIIITSATIDADRFARHFGREVKGE 185 QYDT+IIDEAHERSLNIDFLLGYLK+LLP+RPDLK+IITSATID +RF+RHF Sbjct: 189 MQYDTLIIDEAHERSLNIDFLLGYLKELLPRRPDLKVIITSATIDPERFSRHFNN----- 243 Query: 186 LVPAPVIEVSGRLYPVEIRYRPIDNADRSGVSTEVAQARARAEGRASQAQKDREQRDLMD 245 AP+IEVSGR YPVE+RYRPI V +A D +RD + Sbjct: 244 ---APIIEVSGRTYPVEVRYRPI-----------VEEA-------------DDTERDQLQ 276 Query: 246 AVVDAVDELARIGSGDVLVFLPGEREIRDAAEALRKHHPPHVEILPLFARLSAQEQERVF 305 A+ DAVDEL R GD+L+F+ GEREIRD A+AL K + H E+LPL+ARLS EQ RVF Sbjct: 277 AIFDAVDELGRESPGDILIFMSGEREIRDTADALNKLNLRHTEVLPLYARLSNSEQNRVF 336 Query: 306 KTSNARRIVLATNVAETSLTVPGIRYVVDAGLARVKRYSYRNKVEQLQIEPVAQSAANQR 365 ++ + RRIVLATNVAETSLTVPGI+YV+D G AR+ RYSYR KV++L IEP++Q++ANQR Sbjct: 337 QSHSGRRIVLATNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQR 396 Query: 366 AGRCGRVAAGVCIRLYDEQDFLQRPKFTDPEILRSSLASVILRMKSLHLTDVESFPFIEP 425 GRCGRV+ G+CIRLY E DFL RP+FTDPEILR++LASVIL+M +L L D+ +FPF+E Sbjct: 397 KGRCGRVSEGICIRLYSEDDFLSRPEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEA 456 Query: 426 PLGRAIADGYQLLQELGAV--EEQGGVNRLTALGKQLARLPLDPRVGRMILAGRDNACLT 483 P R I DG +LL+ELGA+ +EQ +LT LG+QL++LP+DPR+ RM+L + + C+ Sbjct: 457 PDKRNIQDGVRLLEELGAITADEQQTAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVR 516 Query: 484 ELLIIAAAVSVQDPRDRPMDAQNAADNAHKKFADEKSEFASYLKIWKWFEEAIAHKKSNR 543 E +II +A+S+QDPR+RP+D Q A+D H++F D++S+F +++ +W + E SN Sbjct: 517 EAMIITSALSIQDPRERPVDKQQASDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSN- 575 Query: 544 QLQEHCRENFLSQLRLREWRDVHSQLLTIVKEQGWRLNEAPATYDQLHLALLTGLLGNVG 603 Q + CR ++L+ LR+REW+D+++QL +VKE G +N PA Y ++H+ALLTGLL ++G Sbjct: 576 QFRRLCRTDYLNYLRVREWQDIYTQLRQVVKELGIPVNSEPAEYREIHVALLTGLLSHIG 635 Query: 604 FKSEDDAQYLGARGIKFNIWPGAHLTKKPGRWVMAAELVDTARLYARCVANIQPEWLEKL 663 K D +Y GAR +F+I+PG+ L KKP +W M AELV+T+RL+ R A I+PEW+E + Sbjct: 636 MKDADKQEYTGARNARFSIFPGSGLFKKPPKWTMVAELVETSRLWGRIAARIEPEWVEPV 695 Query: 664 GGHLLKKSWGEPRWEKRAAQVTASERATLYGLVVYSQRRINYGKINPTEAREIFIRDALV 723 HL+K+S+ EP WE+ V A+E+ T+YGL + + R++NY +I+P RE+FIR ALV Sbjct: 696 AQHLIKRSYSEPHWERAQGAVMATEKVTVYGLPIVAARKVNYSQIDPALCRELFIRHALV 755 Query: 724 GGDFETRAPFFAHNQKLVREIENLEHKSRRLDVLVDDELIIGFYDKLIPHDICNGVDFEK 783 GD++TR FF N KL E+E LEHKSRR D+LVDD+ + FYD+ I HD+ + F+ Sbjct: 756 EGDWQTRHAFFRENLKLRAEVEELEHKSRRRDILVDDDTLFEFYDQRISHDVISARHFDS 815 Query: 784 WHKEATAADPKLLYLNRDDLMRHEAAGVTTELFPKTMNVAGIAMALSYHFEPGAARDGVT 843 W K+ + P LL + L++ A ++ +P + + + LSY FEPGA DGVT Sbjct: 816 WWKKISRETPDLLNFEKSMLIKEGAEKISKLDYPNFWHQGNLKLRLSYQFEPGADADGVT 875 Query: 844 LTVPLYALNQVSSDRCDWLVPGMLKEKVHLLLKSLPQKLRRHCVPLPDYAARFCERMEER 903 + +PL LNQV +W +PG+ +E V L+KSLP+ +RR+ VP P+YA F R+ Sbjct: 876 VHIPLPLLNQVDESGFEWQIPGLRRELVIALIKSLPKPVRRNFVPAPNYAEAFLGRV--- 932 Query: 904 KTFGRGNLIDAIIADIREQITILVKPSDFKQETLSAHHAMNFKIVDEHGRQLEMGRNLAA 963 T L+DA+ ++R + V D+ + + H + F++V++ ++L+ GR+LA Sbjct: 933 -TPLELPLLDALERELRRMTGVTVDREDWHWDQVPEHLKITFRVVNDKNKKLQEGRSLAE 991 Query: 964 LQAEFGG 970 L+ G Sbjct: 992 LKNALKG 998 >hrpA [L] COG1643 HrpA-like helicases Eco Escherichia coli K12 Length = 1281 Score = 1011 bits (2615), Expect = 0.0, Method: Compositional matrix adjust. Identities = 497/967 (51%), Positives = 679/967 (70%), Gaps = 39/967 (4%) Query: 6 PPVTFPEELPVSGRRHEIAEALRAHQVIIVSGETGSGKTTQLPKICLELGRGEKGLIGHT 65 P +T+P+ LPVS ++ +I EA+R HQV+IV+GETGSGKTTQLPKIC+ELGRG KGLIGHT Sbjct: 50 PEITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGLIGHT 109 Query: 66 QPRRIAASSTAKRIAQELNSPPGELVGYKVRFNDTLSKGAWIKLMTDGILLAETQTDPLL 125 QPRR+AA + A RIA+EL + PG +GYKVRF+D +S +KLMTDGILLAE Q D LL Sbjct: 110 QPRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLL 169 Query: 126 RQYDTIIIDEAHERSLNIDFLLGYLKQLLPKRPDLKIIITSATIDADRFARHFGREVKGE 185 QYDTIIIDEAHERSLNIDFLLGYLK+LLP+RPDLKIIITSATID +RF+RHF Sbjct: 170 MQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNN----- 224 Query: 186 LVPAPVIEVSGRLYPVEIRYRPIDNADRSGVSTEVAQARARAEGRASQAQKDREQRDLMD 245 AP+IEVSGR YPVE+RYRPI V +A D +RD + Sbjct: 225 ---APIIEVSGRTYPVEVRYRPI-----------VEEA-------------DDTERDQLQ 257 Query: 246 AVVDAVDELARIGSGDVLVFLPGEREIRDAAEALRKHHPPHVEILPLFARLSAQEQERVF 305 A+ DAVDEL++ GD+L+F+ GEREIRD A+AL K + H EILPL+ARLS EQ RVF Sbjct: 258 AIFDAVDELSQESHGDILIFMSGEREIRDTADALNKLNLRHTEILPLYARLSNSEQNRVF 317 Query: 306 KTSNARRIVLATNVAETSLTVPGIRYVVDAGLARVKRYSYRNKVEQLQIEPVAQSAANQR 365 ++ + RRIVLATNVAETSLTVPGI+YV+D G AR+ RYSYR KV++L IEP++Q++ANQR Sbjct: 318 QSHSGRRIVLATNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQR 377 Query: 366 AGRCGRVAAGVCIRLYDEQDFLQRPKFTDPEILRSSLASVILRMKSLHLTDVESFPFIEP 425 GRCGRV+ G+CIRLY E DFL RP+FTDPEILR++LASVIL+M +L L D+ +FPF+E Sbjct: 378 KGRCGRVSEGICIRLYSEDDFLSRPEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEA 437 Query: 426 PLGRAIADGYQLLQELGAV--EEQGGVNRLTALGKQLARLPLDPRVGRMILAGRDNACLT 483 P R I DG +LL+ELGA+ +EQ +LT LG+QL++LP+DPR+ RM+L + + C+ Sbjct: 438 PDKRNIQDGVRLLEELGAITTDEQASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVR 497 Query: 484 ELLIIAAAVSVQDPRDRPMDAQNAADNAHKKFADEKSEFASYLKIWKWFEEAIAHKKSNR 543 E +II +A+S+QDPR+RPMD Q A+D H++F D++S+F +++ +W + E SN Sbjct: 498 EAMIITSALSIQDPRERPMDKQQASDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSN- 556 Query: 544 QLQEHCRENFLSQLRLREWRDVHSQLLTIVKEQGWRLNEAPATYDQLHLALLTGLLGNVG 603 + CR ++L+ LR+REW+D+++QL +VKE G +N PA Y ++H+ALLTGLL ++G Sbjct: 557 AFRRLCRTDYLNYLRVREWQDIYTQLRQVVKELGIPVNSEPAEYREIHIALLTGLLSHIG 616 Query: 604 FKSEDDAQYLGARGIKFNIWPGAHLTKKPGRWVMAAELVDTARLYARCVANIQPEWLEKL 663 K D +Y GAR +F+I+PG+ L KKP +WVM AELV+T+RL+ R A I PEW+E + Sbjct: 617 MKDADKQEYTGARNARFSIFPGSGLFKKPPKWVMVAELVETSRLWGRIAARIDPEWVEPV 676 Query: 664 GGHLLKKSWGEPRWEKRAAQVTASERATLYGLVVYSQRRINYGKINPTEAREIFIRDALV 723 HL+K+++ EP WE+ V A+E+ T+YGL + + R++NY +I+P RE+FIR ALV Sbjct: 677 AQHLIKRTYSEPHWERAQGAVMATEKVTVYGLPIVAARKVNYSQIDPALCRELFIRHALV 736 Query: 724 GGDFETRAPFFAHNQKLVREIENLEHKSRRLDVLVDDELIIGFYDKLIPHDICNGVDFEK 783 GD++TR FF N KL E+E LEHKSRR D+LVDDE + FYD+ I HD+ + F+ Sbjct: 737 EGDWQTRHAFFRENLKLRAEVEELEHKSRRRDILVDDETLFEFYDQRISHDVISARHFDS 796 Query: 784 WHKEATAADPKLLYLNRDDLMRHEAAGVTTELFPKTMNVAGIAMALSYHFEPGAARDGVT 843 W K+ + P LL + L++ A ++ +P + + + LSY FEPGA DGVT Sbjct: 797 WWKKVSRETPDLLNFEKSMLIKEGAEKISKLDYPNFWHQGNLKLRLSYQFEPGADADGVT 856 Query: 844 LTVPLYALNQVSSDRCDWLVPGMLKEKVHLLLKSLPQKLRRHCVPLPDYAARFCERMEER 903 + +PL LNQV +W +PG+ +E V L+KSLP+ +RR+ VP P+YA F R++ Sbjct: 857 VHIPLPLLNQVEESGFEWQIPGLRRELVIALIKSLPKPVRRNFVPAPNYAEAFLGRVKPL 916 Query: 904 KTFGRGNLIDAIIADIREQITILVKPSDFKQETLSAHHAMNFKIVDEHGRQLEMGRNLAA 963 + L+D++ ++R + V D+ + + H + F++VD+ ++L+ GR+L Sbjct: 917 EL----PLLDSLERELRRMTGVTVDREDWHWDQVPDHLKITFRVVDDKNKKLKEGRSLQD 972 Query: 964 LQAEFGG 970 L+ G Sbjct: 973 LKDALKG 979 >ZhrpA [L] COG1643 HrpA-like helicases EcZ Escherichia coli O157:H7 EDL933 Length = 1281 Score = 1011 bits (2613), Expect = 0.0, Method: Compositional matrix adjust. Identities = 498/967 (51%), Positives = 678/967 (70%), Gaps = 39/967 (4%) Query: 6 PPVTFPEELPVSGRRHEIAEALRAHQVIIVSGETGSGKTTQLPKICLELGRGEKGLIGHT 65 P +T+P+ LPVS ++ +I EA+R HQV+IV+GETGSGKTTQLPKIC+ELGRG KGLIGHT Sbjct: 50 PEITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGLIGHT 109 Query: 66 QPRRIAASSTAKRIAQELNSPPGELVGYKVRFNDTLSKGAWIKLMTDGILLAETQTDPLL 125 QPRR+AA + A RIA+EL + PG +GYKVRF+D +S +KLMTDGILLAE Q D LL Sbjct: 110 QPRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLL 169 Query: 126 RQYDTIIIDEAHERSLNIDFLLGYLKQLLPKRPDLKIIITSATIDADRFARHFGREVKGE 185 QYDTIIIDEAHERSLNIDFLLGYLK+LLP+RPDLKIIITSATID +RF+RHF Sbjct: 170 MQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNN----- 224 Query: 186 LVPAPVIEVSGRLYPVEIRYRPIDNADRSGVSTEVAQARARAEGRASQAQKDREQRDLMD 245 AP+IEVSGR YPVE+RYRPI V +A D +RD + Sbjct: 225 ---APIIEVSGRTYPVEVRYRPI-----------VEEA-------------DDTERDQLQ 257 Query: 246 AVVDAVDELARIGSGDVLVFLPGEREIRDAAEALRKHHPPHVEILPLFARLSAQEQERVF 305 A+ DAVDEL++ GD+L+F+ GEREIRD A+AL K + H EILPL+ARLS EQ RVF Sbjct: 258 AIFDAVDELSQESPGDILIFMSGEREIRDTADALNKLNLRHTEILPLYARLSNSEQNRVF 317 Query: 306 KTSNARRIVLATNVAETSLTVPGIRYVVDAGLARVKRYSYRNKVEQLQIEPVAQSAANQR 365 ++ + RRIVLATNVAETSLTVPGI+YV+D G AR+ RYSYR KV++L IEP++Q++ANQR Sbjct: 318 QSHSGRRIVLATNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQR 377 Query: 366 AGRCGRVAAGVCIRLYDEQDFLQRPKFTDPEILRSSLASVILRMKSLHLTDVESFPFIEP 425 GRCGRV+ G+CIRLY E DFL RP+FTDPEILR++LASVIL+M +L L D+ +FPF+E Sbjct: 378 KGRCGRVSEGICIRLYSEDDFLSRPEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEA 437 Query: 426 PLGRAIADGYQLLQELGAV--EEQGGVNRLTALGKQLARLPLDPRVGRMILAGRDNACLT 483 P R I DG +LL+ELGA+ +EQ +LT LG+QL++LP+DPR+ RM+L + + C+ Sbjct: 438 PDKRNIQDGVRLLEELGAITTDEQASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVR 497 Query: 484 ELLIIAAAVSVQDPRDRPMDAQNAADNAHKKFADEKSEFASYLKIWKWFEEAIAHKKSNR 543 E +II +A+S+QDPR+RPMD Q A+D H++F D++S+F +++ +W + E SN Sbjct: 498 EAMIITSALSIQDPRERPMDKQQASDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSN- 556 Query: 544 QLQEHCRENFLSQLRLREWRDVHSQLLTIVKEQGWRLNEAPATYDQLHLALLTGLLGNVG 603 + CR ++L+ LR+REW+D+++QL +VKE G +N PA Y ++H+ALLTGLL ++G Sbjct: 557 AFRRLCRTDYLNYLRVREWQDIYTQLRQVVKELGIPVNSEPAEYREIHIALLTGLLSHIG 616 Query: 604 FKSEDDAQYLGARGIKFNIWPGAHLTKKPGRWVMAAELVDTARLYARCVANIQPEWLEKL 663 K D +Y GAR +F+I+PG+ L KKP +WVM AELV+T+RL+ R A I PEW+E + Sbjct: 617 MKDADKQEYTGARNARFSIFPGSGLFKKPPKWVMVAELVETSRLWGRIAARIDPEWVEPV 676 Query: 664 GGHLLKKSWGEPRWEKRAAQVTASERATLYGLVVYSQRRINYGKINPTEAREIFIRDALV 723 HL+K+++ EP WE+ V A+E+ T+YGL + + R++NY +I+P RE+FIR ALV Sbjct: 677 AQHLIKRTYSEPHWERAQGAVMATEKVTVYGLPIVAARKVNYSQIDPALCRELFIRHALV 736 Query: 724 GGDFETRAPFFAHNQKLVREIENLEHKSRRLDVLVDDELIIGFYDKLIPHDICNGVDFEK 783 GD++TR FF N KL E+E LEHKSRR D+LVDDE + FYD+ I HD+ + F+ Sbjct: 737 EGDWQTRHAFFRENLKLRAEVEELEHKSRRRDILVDDETLFEFYDQRIGHDVISARHFDS 796 Query: 784 WHKEATAADPKLLYLNRDDLMRHEAAGVTTELFPKTMNVAGIAMALSYHFEPGAARDGVT 843 W K+ + P LL + L++ A ++ +P + + + LSY FEPGA DGVT Sbjct: 797 WWKKVSRETPDLLNFEKSMLIKEGAEKISKLDYPNFWHQGNLKLRLSYQFEPGADADGVT 856 Query: 844 LTVPLYALNQVSSDRCDWLVPGMLKEKVHLLLKSLPQKLRRHCVPLPDYAARFCERMEER 903 + +PL LNQV +W +PG+ +E V L+KSLP+ +RR+ VP P+YA F R+ Sbjct: 857 VHIPLPLLNQVEESGFEWQIPGLRRELVIALIKSLPKPVRRNFVPAPNYAEAFLGRV--- 913 Query: 904 KTFGRGNLIDAIIADIREQITILVKPSDFKQETLSAHHAMNFKIVDEHGRQLEMGRNLAA 963 T L+D++ ++R + V D+ + + H + F++VD+ ++L+ GR+L Sbjct: 914 -TPLELPLLDSLERELRRMTGVTVDREDWHWDQVPDHLKITFRVVDDKNKKLKEGRSLQD 972 Query: 964 LQAEFGG 970 L+ G Sbjct: 973 LKDALKG 979 >ECs2015 [L] COG1643 HrpA-like helicases Ecs Escherichia coli O157:H7 Length = 1281 Score = 1011 bits (2613), Expect = 0.0, Method: Compositional matrix adjust. Identities = 498/967 (51%), Positives = 678/967 (70%), Gaps = 39/967 (4%) Query: 6 PPVTFPEELPVSGRRHEIAEALRAHQVIIVSGETGSGKTTQLPKICLELGRGEKGLIGHT 65 P +T+P+ LPVS ++ +I EA+R HQV+IV+GETGSGKTTQLPKIC+ELGRG KGLIGHT Sbjct: 50 PEITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGLIGHT 109 Query: 66 QPRRIAASSTAKRIAQELNSPPGELVGYKVRFNDTLSKGAWIKLMTDGILLAETQTDPLL 125 QPRR+AA + A RIA+EL + PG +GYKVRF+D +S +KLMTDGILLAE Q D LL Sbjct: 110 QPRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLL 169 Query: 126 RQYDTIIIDEAHERSLNIDFLLGYLKQLLPKRPDLKIIITSATIDADRFARHFGREVKGE 185 QYDTIIIDEAHERSLNIDFLLGYLK+LLP+RPDLKIIITSATID +RF+RHF Sbjct: 170 MQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNN----- 224 Query: 186 LVPAPVIEVSGRLYPVEIRYRPIDNADRSGVSTEVAQARARAEGRASQAQKDREQRDLMD 245 AP+IEVSGR YPVE+RYRPI V +A D +RD + Sbjct: 225 ---APIIEVSGRTYPVEVRYRPI-----------VEEA-------------DDTERDQLQ 257 Query: 246 AVVDAVDELARIGSGDVLVFLPGEREIRDAAEALRKHHPPHVEILPLFARLSAQEQERVF 305 A+ DAVDEL++ GD+L+F+ GEREIRD A+AL K + H EILPL+ARLS EQ RVF Sbjct: 258 AIFDAVDELSQESPGDILIFMSGEREIRDTADALNKLNLRHTEILPLYARLSNSEQNRVF 317 Query: 306 KTSNARRIVLATNVAETSLTVPGIRYVVDAGLARVKRYSYRNKVEQLQIEPVAQSAANQR 365 ++ + RRIVLATNVAETSLTVPGI+YV+D G AR+ RYSYR KV++L IEP++Q++ANQR Sbjct: 318 QSHSGRRIVLATNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQR 377 Query: 366 AGRCGRVAAGVCIRLYDEQDFLQRPKFTDPEILRSSLASVILRMKSLHLTDVESFPFIEP 425 GRCGRV+ G+CIRLY E DFL RP+FTDPEILR++LASVIL+M +L L D+ +FPF+E Sbjct: 378 KGRCGRVSEGICIRLYSEDDFLSRPEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEA 437 Query: 426 PLGRAIADGYQLLQELGAV--EEQGGVNRLTALGKQLARLPLDPRVGRMILAGRDNACLT 483 P R I DG +LL+ELGA+ +EQ +LT LG+QL++LP+DPR+ RM+L + + C+ Sbjct: 438 PDKRNIQDGVRLLEELGAITTDEQASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVR 497 Query: 484 ELLIIAAAVSVQDPRDRPMDAQNAADNAHKKFADEKSEFASYLKIWKWFEEAIAHKKSNR 543 E +II +A+S+QDPR+RPMD Q A+D H++F D++S+F +++ +W + E SN Sbjct: 498 EAMIITSALSIQDPRERPMDKQQASDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSN- 556 Query: 544 QLQEHCRENFLSQLRLREWRDVHSQLLTIVKEQGWRLNEAPATYDQLHLALLTGLLGNVG 603 + CR ++L+ LR+REW+D+++QL +VKE G +N PA Y ++H+ALLTGLL ++G Sbjct: 557 AFRRLCRTDYLNYLRVREWQDIYTQLRQVVKELGIPVNSEPAEYREIHIALLTGLLSHIG 616 Query: 604 FKSEDDAQYLGARGIKFNIWPGAHLTKKPGRWVMAAELVDTARLYARCVANIQPEWLEKL 663 K D +Y GAR +F+I+PG+ L KKP +WVM AELV+T+RL+ R A I PEW+E + Sbjct: 617 MKDADKQEYTGARNARFSIFPGSGLFKKPPKWVMVAELVETSRLWGRIAARIDPEWVEPV 676 Query: 664 GGHLLKKSWGEPRWEKRAAQVTASERATLYGLVVYSQRRINYGKINPTEAREIFIRDALV 723 HL+K+++ EP WE+ V A+E+ T+YGL + + R++NY +I+P RE+FIR ALV Sbjct: 677 AQHLIKRTYSEPHWERAQGAVMATEKVTVYGLPIVAARKVNYSQIDPALCRELFIRHALV 736 Query: 724 GGDFETRAPFFAHNQKLVREIENLEHKSRRLDVLVDDELIIGFYDKLIPHDICNGVDFEK 783 GD++TR FF N KL E+E LEHKSRR D+LVDDE + FYD+ I HD+ + F+ Sbjct: 737 EGDWQTRHAFFRENLKLRAEVEELEHKSRRRDILVDDETLFEFYDQRIGHDVISARHFDS 796 Query: 784 WHKEATAADPKLLYLNRDDLMRHEAAGVTTELFPKTMNVAGIAMALSYHFEPGAARDGVT 843 W K+ + P LL + L++ A ++ +P + + + LSY FEPGA DGVT Sbjct: 797 WWKKVSRETPDLLNFEKSMLIKEGAEKISKLDYPNFWHQGNLKLRLSYQFEPGADADGVT 856 Query: 844 LTVPLYALNQVSSDRCDWLVPGMLKEKVHLLLKSLPQKLRRHCVPLPDYAARFCERMEER 903 + +PL LNQV +W +PG+ +E V L+KSLP+ +RR+ VP P+YA F R+ Sbjct: 857 VHIPLPLLNQVEESGFEWQIPGLRRELVIALIKSLPKPVRRNFVPAPNYAEAFLGRV--- 913 Query: 904 KTFGRGNLIDAIIADIREQITILVKPSDFKQETLSAHHAMNFKIVDEHGRQLEMGRNLAA 963 T L+D++ ++R + V D+ + + H + F++VD+ ++L+ GR+L Sbjct: 914 -TPLELPLLDSLERELRRMTGVTVDREDWHWDQVPDHLKITFRVVDDKNKKLKEGRSLQD 972 Query: 964 LQAEFGG 970 L+ G Sbjct: 973 LKDALKG 979