BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0015.0022.p (519 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value RSc1155 [NT] COG0840 Methyl-accepting chemotaxis protein Rso Ral... 372 e-102 RSp1363 [NT] COG0840 Methyl-accepting chemotaxis protein Rso Ral... 348 2e-95 RSc2799 [NT] COG0840 Methyl-accepting chemotaxis protein Rso Ral... 347 3e-95 RSc3412 [NT] COG0840 Methyl-accepting chemotaxis protein Rso Ral... 337 3e-92 RSp1099 [NT] COG0840 Methyl-accepting chemotaxis protein Rso Ral... 335 1e-91 >RSc1155 [NT] COG0840 Methyl-accepting chemotaxis protein Rso Ralstonia solanacearum Length = 629 Score = 372 bits (954), Expect = e-102, Method: Compositional matrix adjust. Identities = 205/306 (66%), Positives = 251/306 (82%) Query: 189 RGLLKQLGGEPAYAADIAQQIAAGDLTSEVNVKAGDTTSLLFAIKKMRDSLVGIVGRVRE 248 RGL + LGG+PAYAA++A +IA GDL+ E+ + D SLL+A+ +MR +LV +GR+R Sbjct: 216 RGLQRALGGDPAYAAEVANRIAGGDLSVEIATRPDDRDSLLYAMGRMRGALVQTIGRIRG 275 Query: 249 GTQAIEQASTEIATGNLDLSARTEQQAGALEETASAMEELMSTVKQNADNAKQASELAVS 308 ++ I A+ EIA+GNLDLS+RTEQQA +LEETASAMEELMSTV+QNADNA QA++LAVS Sbjct: 276 ASETIGTATREIASGNLDLSSRTEQQASSLEETASAMEELMSTVQQNADNANQANQLAVS 335 Query: 309 ASDVATQGGEVVGKVVSTMEGINASSRKIVDIISVIDGIAFQTNILALNAAVEAARAGEQ 368 ASDVA +GG+VV +VV TM INASSRKIVDII VIDGIAFQTNILALNAAVEAARAGEQ Sbjct: 336 ASDVAVRGGDVVSRVVETMGSINASSRKIVDIIGVIDGIAFQTNILALNAAVEAARAGEQ 395 Query: 369 GRGFAVVASEVRSLAQRSATAAKEITELINDSVAQIAQGSSLVEQAGMTMENVVTSVKRV 428 GRGFAVVA EVRSLAQRSA AAKEI LI+DSV + GS+LVE+AG TM +V SV+RV Sbjct: 396 GRGFAVVAGEVRSLAQRSAAAAKEIKALIDDSVTNVDAGSALVEEAGTTMREIVASVRRV 455 Query: 429 TDVVAEISHASQEQSHGITQVNLAITHMDEATQQNSALVEEAAAAANAMMEQAGELAGLV 488 TD+V EI+ ASQEQ GI +V+ A+T +D+ATQQN+ALVE+AAAAA ++ EQA L +V Sbjct: 456 TDIVGEITAASQEQRSGIEEVSHAVTQLDDATQQNAALVEQAAAAAQSLQEQADSLTQVV 515 Query: 489 STFKLD 494 + F+LD Sbjct: 516 AQFRLD 521 >RSp1363 [NT] COG0840 Methyl-accepting chemotaxis protein Rso Ralstonia solanacearum Length = 543 Score = 348 bits (892), Expect = 2e-95, Method: Compositional matrix adjust. Identities = 201/390 (51%), Positives = 274/390 (70%), Gaps = 10/390 (2%) Query: 119 EEFRDFLVNECSPLRRQIVLDINKLIAEVDAENDKAHEDTIAMASKASVVVAVLTIIVAL 178 +E R + S L+ + + ++K++ E + + A + A + + VL ++ L Sbjct: 142 QEARALYQGDMSRLQDRYYVLVDKMVDHQAGEMEHDVSEAAAQGANAKIQMIVLAVLATL 201 Query: 179 ISALVAFAITRGLLKQLGGEPAYAADIAQQIAAGDLTSEVNVKAGDTTS-LLFAIKKMRD 237 ++ ITR + + + +A +A+ +A G+LT + V D LL A+K M + Sbjct: 202 LAIATGAFITRTITRPIN----HAMHLAEAVAQGNLTHLLEVDTQDEIGRLLAALKHMIE 257 Query: 238 SLVGIVGRVREGTQAIEQASTEIATGNLDLSARTEQQAGALEETASAMEELMSTVKQNAD 297 +L GIV +VR GT I +AS+E+A+GN+DLS+RTEQQA +LEETA+AME+L STVKQNAD Sbjct: 258 NLHGIVSQVRGGTDTITRASSEVASGNIDLSSRTEQQASSLEETAAAMEQLTSTVKQNAD 317 Query: 298 NAKQASELAVSASDVATQGGEVVGKVVSTMEGINASSRKIVDIISVIDGIAFQTNILALN 357 NA++AS LA +AS VAT+GG+ V + + TM IN SSRKIVDII VIDGIAFQTNILALN Sbjct: 318 NAQEASRLASNASMVATKGGDAVDEAIQTMSTINTSSRKIVDIIGVIDGIAFQTNILALN 377 Query: 358 AAVEAARAGEQGRGFAVVASEVRSLAQRSATAAKEITELINDSVAQIAQGSSLVEQAGMT 417 AAVEAARAGEQGRGFAVVA EVRSLAQRSA AAKEI LI DSV ++ G++ VE+AG Sbjct: 378 AAVEAARAGEQGRGFAVVAGEVRSLAQRSAAAAKEIKALIEDSVGHVSTGTAKVEEAGQI 437 Query: 418 MENVVTSVKRVTDVVAEISHASQEQSHGITQVNLAITHMDEATQQNSALVEEAAAAANAM 477 + +VV ++ VT++V+EIS +S+EQS GI Q+N AIT MD+ATQ+N++LVEE+A AA A+ Sbjct: 438 IRDVVAGIQNVTNIVSEISASSREQSDGIEQINEAITQMDKATQENASLVEESATAAQAL 497 Query: 478 MEQAGELAGLVSTFKLDDAKGFATVTGIGR 507 +QA +LA +VSTFKL A ++G GR Sbjct: 498 QDQANQLADMVSTFKL-----HADLSGRGR 522 >RSc2799 [NT] COG0840 Methyl-accepting chemotaxis protein Rso Ralstonia solanacearum Length = 515 Score = 347 bits (891), Expect = 3e-95, Method: Compositional matrix adjust. Identities = 201/330 (60%), Positives = 248/330 (75%), Gaps = 8/330 (2%) Query: 171 VLTIIVALISALVA--------FAITRGLLKQLGGEPAYAADIAQQIAAGDLTSEVNVKA 222 V ++I LI+ LV F I R + + LGGEPAYA +IA++IA GDL V + Sbjct: 184 VRSLIANLIAILVVGGAVTLAMFLIIRNVQRGLGGEPAYATEIARRIADGDLAVRVQTRP 243 Query: 223 GDTTSLLFAIKKMRDSLVGIVGRVREGTQAIEQASTEIATGNLDLSARTEQQAGALEETA 282 D S+LFA+ +M+ L G +G ++ +I A+ +IATGN DLS RTE+QA +LEETA Sbjct: 244 DDRNSMLFAMARMQQQLTGTIGHIKTSADSIASATQQIATGNADLSQRTEEQASSLEETA 303 Query: 283 SAMEELMSTVKQNADNAKQASELAVSASDVATQGGEVVGKVVSTMEGINASSRKIVDIIS 342 S+MEEL S VKQNADNA+QAS LAV+ASD+A +GGEVVG+VV TM GIN SS+KI DII Sbjct: 304 SSMEELTSIVKQNADNARQASTLAVNASDIAVKGGEVVGRVVDTMAGINDSSKKIADIIG 363 Query: 343 VIDGIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRSLAQRSATAAKEITELINDSVA 402 VI+GIAFQTNILALNAAVEAARAGEQGRGFAVVA EVRSLAQRSA AAKEI LI+DSV Sbjct: 364 VIEGIAFQTNILALNAAVEAARAGEQGRGFAVVAGEVRSLAQRSAGAAKEIKVLISDSVG 423 Query: 403 QIAQGSSLVEQAGMTMENVVTSVKRVTDVVAEISHASQEQSHGITQVNLAITHMDEATQQ 462 ++ G++LV +AG ++ VV +VKRVTD++ EIS AS EQS GI QVN A+ MDE TQQ Sbjct: 424 RVENGTTLVAEAGTVIDEVVVAVKRVTDIMGEISAASDEQSSGIEQVNQAVNQMDEVTQQ 483 Query: 463 NSALVEEAAAAANAMMEQAGELAGLVSTFK 492 N+ALVEEAAAAA ++ EQA L V++F+ Sbjct: 484 NAALVEEAAAAALSLEEQATLLRDAVASFR 513 >RSc3412 [NT] COG0840 Methyl-accepting chemotaxis protein Rso Ralstonia solanacearum Length = 515 Score = 337 bits (865), Expect = 3e-92, Method: Compositional matrix adjust. Identities = 183/298 (61%), Positives = 231/298 (77%) Query: 196 GGEPAYAADIAQQIAAGDLTSEVNVKAGDTTSLLFAIKKMRDSLVGIVGRVREGTQAIEQ 255 GGEP+ AA +A GDL+ + V A D TSLL +K+M+ SL GIV VR +++ Sbjct: 216 GGEPSVAAQAVSAMAQGDLSRVIAVDADDRTSLLAKLKEMQASLSGIVATVRNNAESVAT 275 Query: 256 ASTEIATGNLDLSARTEQQAGALEETASAMEELMSTVKQNADNAKQASELAVSASDVATQ 315 AS +IA GN DLS RTEQQA AL+ET++ M+EL STV NA+NA+QA++LA AS VA + Sbjct: 276 ASAQIAQGNQDLSHRTEQQASALQETSATMDELGSTVGNNAENARQANQLASGASSVAAE 335 Query: 316 GGEVVGKVVSTMEGINASSRKIVDIISVIDGIAFQTNILALNAAVEAARAGEQGRGFAVV 375 GGEVV +VV M+GIN S+KI DII VIDGIAFQTNILALNAAVEAARAGEQGRGFAVV Sbjct: 336 GGEVVSQVVGMMKGINDGSKKIADIIGVIDGIAFQTNILALNAAVEAARAGEQGRGFAVV 395 Query: 376 ASEVRSLAQRSATAAKEITELINDSVAQIAQGSSLVEQAGMTMENVVTSVKRVTDVVAEI 435 A+EVRSLAQRSA AAKEI LI SV Q+ QG++LV++AG TME +V +++RV+++VAEI Sbjct: 396 AAEVRSLAQRSAAAAKEIKALITSSVEQVEQGTTLVDRAGATMEQIVGAIQRVSNIVAEI 455 Query: 436 SHASQEQSHGITQVNLAITHMDEATQQNSALVEEAAAAANAMMEQAGELAGLVSTFKL 493 S AS EQS G++QV A++ MDEATQQN+ALVE++AAAA+++ QA +L V+ FKL Sbjct: 456 SSASAEQSSGVSQVGQAVSQMDEATQQNAALVEQSAAAASSLQGQAQQLVQAVAVFKL 513 >RSp1099 [NT] COG0840 Methyl-accepting chemotaxis protein Rso Ralstonia solanacearum Length = 513 Score = 335 bits (860), Expect = 1e-91, Method: Compositional matrix adjust. Identities = 199/307 (64%), Positives = 240/307 (78%) Query: 187 ITRGLLKQLGGEPAYAADIAQQIAAGDLTSEVNVKAGDTTSLLFAIKKMRDSLVGIVGRV 246 + RGL +QLGG+PAYAADIA +IAAGDL V + GD S+LFA+ +M+ L G + + Sbjct: 207 LARGLQRQLGGDPAYAADIAARIAAGDLAMRVETRPGDRDSVLFAMAQMQRELTGTISHI 266 Query: 247 REGTQAIEQASTEIATGNLDLSARTEQQAGALEETASAMEELMSTVKQNADNAKQASELA 306 + +I A+ +IA GN DLS RTEQQA +LEETAS+MEEL S VKQNADNA+QAS LA Sbjct: 267 KHSADSIASATQQIAAGNADLSQRTEQQASSLEETASSMEELTSIVKQNADNARQASTLA 326 Query: 307 VSASDVATQGGEVVGKVVSTMEGINASSRKIVDIISVIDGIAFQTNILALNAAVEAARAG 366 V+ASDVA +GGEVVG+VV TM GIN SS+KI DII VI+GIAFQTNILALNAAVEAARAG Sbjct: 327 VNASDVAVKGGEVVGRVVETMAGINDSSKKIADIIGVIEGIAFQTNILALNAAVEAARAG 386 Query: 367 EQGRGFAVVASEVRSLAQRSATAAKEITELINDSVAQIAQGSSLVEQAGMTMENVVTSVK 426 EQGRGFAVVA EVRSLAQRSA AAKEI ELI DSV ++ G++LVE+AG ++ VV +VK Sbjct: 387 EQGRGFAVVAGEVRSLAQRSAGAAKEIKELIGDSVGRVRNGTALVEEAGAVIDEVVVAVK 446 Query: 427 RVTDVVAEISHASQEQSHGITQVNLAITHMDEATQQNSALVEEAAAAANAMMEQAGELAG 486 RVTD++ EIS AS EQS GI QVN A+ MD+ TQQN+ALVE+AAAAA ++ EQA L Sbjct: 447 RVTDIMGEISAASAEQSSGIEQVNQAVNQMDQVTQQNAALVEQAAAAALSLEEQAQVLRT 506 Query: 487 LVSTFKL 493 V F++ Sbjct: 507 AVGRFQM 513