BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0014.0023.p (323 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value PA4927_2 [S] COG2307 Uncharacterized protein conserved in bacter... 143 6e-34 AGl1958_2 [S] COG2307 Uncharacterized protein conserved in bacte... 90 7e-18 ML2679_2 [S] COG2307 Uncharacterized protein conserved in bacter... 89 1e-17 SMc04057_2 [S] COG2307 Uncharacterized protein conserved in bact... 87 4e-17 Rv2567_2 [S] COG2307 Uncharacterized protein conserved in bacter... 87 6e-17 >PA4927_2 [S] COG2307 Uncharacterized protein conserved in bacteria Pae Pseudomonas aeruginosa Length = 317 Score = 143 bits (360), Expect = 6e-34, Method: Compositional matrix adjust. Identities = 107/314 (34%), Positives = 161/314 (51%), Gaps = 21/314 (6%) Query: 9 ENLFWMGRYSERVKNLSRLLRTTLQYTMDGQTESRGMLGSVSWICSQLGVQMPKSEPRPT 68 ENLFW GRY+ER + +RLLR L +D + + +++ + +G+ EP Sbjct: 4 ENLFWYGRYAERCDDHARLLRVVLSRYVDADGDEEALRSALA-LAGGIGLLPGDGEP--- 59 Query: 69 ITGLQQSLQAAVVDPSVPVSVATQLRQLANAAYQVREHLSLDNWHALTK----MPAMVQE 124 L++ L A++D P S+ LR+L AA QVR LS +NW AL + M A+ Sbjct: 60 ---LERCLLRALLDEHWPASLCANLRRLHWAAAQVRGRLSGENWLALLELQRDMQALDPA 116 Query: 125 RINTPAAAQHVLGNVIDACSGLAGHALDDMTRDAGWQFLMVGRHIERMANMAALFDNFLR 184 R + A L ++ + + L+G ALDDMTRD GW+FLM+GR IER+ A FL Sbjct: 117 RTDL-GEALDFLNRLVMSLAALSGFALDDMTRDDGWRFLMIGRRIERVRFFAESIAAFL- 174 Query: 185 LPPQRQTAALSWLLEAASSIVTYRVRYRRTPEWLPVLHLLVFDVSNPHGMAYQFRMLQQY 244 AL WLLE +S +TYR RY +P+ +PVL LL+ NPH + +Q + L++ Sbjct: 175 -GSAWDAGALEWLLELGNSGITYRSRYLASPQLVPVLDLLLLHEQNPHSLRFQLQALERS 233 Query: 245 MAEIAQQLGLLSMTIPAHLTSQLEAMNLAEFAHDHP-----NVAEANARLTQLMRDAVSG 299 + + ++ G L +L + +LA A + P + E L +L+RD + Sbjct: 234 LERLHEEFGAPRERELRTLGERLRSFDLA--ALESPLFGAAGLDEVLVGLARLLRDIAAC 291 Query: 300 GYMLSDDLSRHYFT 313 +SD L YF Sbjct: 292 AGQVSDRLGLRYFA 305 >AGl1958_2 [S] COG2307 Uncharacterized protein conserved in bacteria Atu Agrobacterium tumefaciens strain C58 (Cereon) Length = 294 Score = 89.7 bits (221), Expect = 7e-18, Method: Compositional matrix adjust. Identities = 69/250 (27%), Positives = 108/250 (43%), Gaps = 31/250 (12%) Query: 5 SHSGENLFWMGRYSERVKNLSRLLRTTLQYTMDGQTESRGMLGSVSWICSQLGVQMPKSE 64 S + +NLFW+GRY ER + R+LR +W P+ Sbjct: 15 SRAADNLFWLGRYIERSEGALRILR--------------------AWHGRYAESADPRQP 54 Query: 65 PRPTITGLQQSLQAAVVDPSVPVSVATQLRQLANAAYQVREHLSLDNWHALTKMPAMVQE 124 +TG ++L + D +VP S+ + +A +R+ S D W AL + A Sbjct: 55 LLAHVTGYLEALDVEMND-AVPESLLNNINSALYSASNIRDRFSPDGWLALNDL-AKTAR 112 Query: 125 RINTPAA----AQHVLGNVIDACSGLAGHALDDMTRDAGWQFLMVGRHIERMANMAALFD 180 R + A A H + ++ +G AG ++M R GW+FL +GR++ER +M L Sbjct: 113 RFHAKVAPGDDATHAMTILLRKLAGFAGLVHENMYRFTGWRFLSIGRYLERGLHMTRLLG 172 Query: 181 NFLRLPPQRQTAALSWLLEAASSIVTYRVRYRRTPEWLPVLHLLVFDVSNPHGMAYQFRM 240 + P + LLE S++T+R RY L V LL D NP + +Q Sbjct: 173 HM--TGPDAPDGSYDMLLEIGDSVMTHRRRYNVNTAGLTVTDLLALDPLNPRSILFQ--- 227 Query: 241 LQQYMAEIAQ 250 L + E+ Q Sbjct: 228 LNEIRTEVEQ 237 >ML2679_2 [S] COG2307 Uncharacterized protein conserved in bacteria Mle Mycobacterium leprae Length = 339 Score = 89.4 bits (220), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 74/254 (29%), Positives = 115/254 (45%), Gaps = 16/254 (6%) Query: 10 NLFWMGRYSERVKNLSRLLRTTLQYTMDGQ----TESRGMLGS-VSWICSQLGVQMPKSE 64 +LFWMGRY ER +N++RLL T ++ D + TE L ++ + G Sbjct: 5 DLFWMGRYGERAENMARLLIVTREHYHDSRHRQNTEENACLPVLIAALGKITGTDTGSGG 64 Query: 65 PRPTITGLQQSLQAAVVDPSVPVSVATQLRQLANAAYQVREHLSLDNWHALTKMP-AMVQ 123 I +L + D ++P S+ + L AA VR LS D W L+++ AMV Sbjct: 65 QADVIAVAPSTLWSLTTDRNLPGSLVQSVDGLVLAARAVRAQLSRDTWMVLSEVERAMVH 124 Query: 124 ER------INTPAAAQHVLGNVIDACSGLAGHALDDMTRDAGWQFLMVGRHIERMANMAA 177 E + A V + L+G A + M RD GW + +G+ IER + A Sbjct: 125 ETEPPESLVEGDALLASVQARTLAGMLTLSGLAGESMVRDIGWTIMDIGKRIERGLALTA 184 Query: 178 LFDNFL---RLPPQRQTAALSWLLEAASSIVTYRVRYRRTPEWLPVLHLLVFDVSNPHGM 234 L L R P + S L+ SS++ Y+ R T + V L++FD +NP + Sbjct: 185 LLHATLTDVRSPAAEHSIIESILVICESSVI-YQRRTVSTIDVAVVAELMLFDATNPRSL 243 Query: 235 AYQFRMLQQYMAEI 248 YQ L+ +A++ Sbjct: 244 VYQLDRLRVDLADL 257 >SMc04057_2 [S] COG2307 Uncharacterized protein conserved in bacteria Sme Sinorhizobium meliloti Length = 285 Score = 87.4 bits (215), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 67/242 (27%), Positives = 106/242 (43%), Gaps = 26/242 (10%) Query: 5 SHSGENLFWMGRYSERVKNLSRLLRTTLQYTMDGQTESRGMLGSVSWICSQLGVQMPKSE 64 S + +NLFW+GRY ER + R+LR + + +L VS + LG+ E Sbjct: 6 SRAADNLFWLGRYIERAEGALRVLRAWHGRFAESADPNMPLLKDVSDYLAVLGIS--TGE 63 Query: 65 PRPTITGLQQSLQAAVVDPSVPVSVATQLRQLANAAYQVREHLSLDNWHALTKMPAMVQE 124 P VP S+ + + +A +R+ S D W AL + ++ Sbjct: 64 P-------------------VPDSLLSSIDSALFSAGNIRDRFSPDGWLALNDLSRTARK 104 Query: 125 RINTPAA---AQHVLGNVIDACSGLAGHALDDMTRDAGWQFLMVGRHIERMANMAALFDN 181 T A A H + ++ +G AG ++M R GW+FL +GR++ER +M L + Sbjct: 105 FHATVQAGDDATHAMTILLRKLAGFAGLVHENMYRFTGWRFLSIGRYLERGLHMTGLLGH 164 Query: 182 FLRLPPQRQTAALSWLLEAASSIVTYRVRYRRTPEWLPVLHLLVFDVSNPHGMAYQFRML 241 P+ A LLE S++T+R RY V LL D NP + YQ + Sbjct: 165 M--SGPEAPDGAYDMLLEIGDSVMTHRRRYNVNTAAPTVTDLLALDPLNPRSVLYQLNEI 222 Query: 242 QQ 243 ++ Sbjct: 223 KK 224 >Rv2567_2 [S] COG2307 Uncharacterized protein conserved in bacteria Mtu Mycobacterium tuberculosis H37Rv Length = 345 Score = 87.0 bits (214), Expect = 6e-17, Method: Compositional matrix adjust. Identities = 78/262 (29%), Positives = 113/262 (43%), Gaps = 27/262 (10%) Query: 10 NLFWMGRYSERVKNLSRLLRTTLQ-YTMDGQTESRGMLGSVSWICSQLGVQMPKSEPRPT 68 +LFWMGRY ER +N++RLL T + Y + + V + + LG K T Sbjct: 5 DLFWMGRYGERAENMARLLIVTRERYHVFRHQQDTDESECVPVLMAALG----KITGYDT 60 Query: 69 ITGLQQSLQAA-------------VVDPSVPVSVATQLRQLANAAYQVREHLSLDNWHAL 115 TG + A VDP P S+ + LA AA VR+ LS D W L Sbjct: 61 ATGAGSAYDRADMIAVAPSTLWSLTVDPDRPGSLVQSVEGLALAAQAVRDQLSNDTWMVL 120 Query: 116 TKMPAMVQERINTP---AAAQHVLGNV-IDACSG---LAGHALDDMTRDAGWQFLMVGRH 168 + V+ + + P A A VL + + +G L+G A + M D GW + +G+ Sbjct: 121 ANVERAVEHKSDPPQSLAEADAVLASAQAETLAGMLTLSGVAGESMVHDVGWTMMDIGKR 180 Query: 169 IERMANMAALFDNFLRLP--PQRQTAALSWLLEAASSIVTYRVRYRRTPEWLPVLHLLVF 226 IER + AL L P + A + L A S V YR R V L++F Sbjct: 181 IERGLWLTALLQATLSTVRHPAAEQAIIEATLVACESSVIYRRRTVGKFSVAAVTELMLF 240 Query: 227 DVSNPHGMAYQFRMLQQYMAEI 248 D NP + YQ L+ + ++ Sbjct: 241 DAQNPRSLVYQLERLRADLKDL 262