BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0013.0014.p         (121 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

aq_1329 [H] COG0476 Dinucleotide-utilizing enzymes involved in m...   127   5e-30
STM4162 [H] COG0476 Dinucleotide-utilizing enzymes involved in m...   124   7e-29
RSc0351 [H] COG0476 Dinucleotide-utilizing enzymes involved in m...   122   3e-28
thiF [H] COG0476 Dinucleotide-utilizing enzymes involved in moly...   119   2e-27
moeB [H] COG0476 Dinucleotide-utilizing enzymes involved in moly...   119   2e-27

>aq_1329 [H] COG0476 Dinucleotide-utilizing enzymes involved in
           molybdopterin and thiamine biosynthesis family 2 Aae
           Aquifex aeolicus
          Length = 271

 Score =  127 bits (320), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 59/105 (56%), Positives = 78/105 (74%)

Query: 3   DQQLLRYSRHILLDEIDIEGQTRLLQGHALVIGAGGLGSPAAMYLASAGVGHITLVDHDT 62
           ++Q+ RY+RHI+L E+  +GQ +LLQ   LVIGAGGLGSPA  YLA+AGVG I +VD D 
Sbjct: 6   EEQIKRYARHIILPEVGGKGQAKLLQSKVLVIGAGGLGSPALYYLAAAGVGTIGIVDFDV 65

Query: 63  VDLTNLQRQIMHTTARVGQPKVASGREALQQINPGVQVTALAERV 107
           VD +NLQRQI+HTT RVG PKV S ++ L+ +NP V+V     ++
Sbjct: 66  VDFSNLQRQILHTTERVGTPKVESAKKTLEALNPDVKVITYNTKI 110


>STM4162 [H] COG0476 Dinucleotide-utilizing enzymes involved in
           molybdopterin and thiamine biosynthesis family 2 Sty
           Salmonella typhimurium LT2
          Length = 252

 Score =  124 bits (310), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 59/112 (52%), Positives = 79/112 (70%)

Query: 1   MDDQQLLRYSRHILLDEIDIEGQTRLLQGHALVIGAGGLGSPAAMYLASAGVGHITLVDH 60
           M+D   +RYSR ILL +I IEGQ +LL  H L++G GGLGSPAA+YLA AG+G +TLVD 
Sbjct: 1   MNDHDFMRYSRQILLGDIAIEGQQKLLNSHVLIVGLGGLGSPAALYLAGAGIGKLTLVDD 60

Query: 61  DTVDLTNLQRQIMHTTARVGQPKVASGREALQQINPGVQVTALAERVEGERL 112
           D V L+NLQRQI+ TT  +  PK  + +  L Q+NPG ++  L +R+ G+ L
Sbjct: 61  DDVHLSNLQRQILFTTDDIAHPKAQAAKLRLAQLNPGSKLIVLQQRLTGDVL 112


>RSc0351 [H] COG0476 Dinucleotide-utilizing enzymes involved in
           molybdopterin and thiamine biosynthesis family 2 Rso
           Ralstonia solanacearum
          Length = 249

 Score =  122 bits (305), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 73/114 (64%), Positives = 93/114 (81%)

Query: 1   MDDQQLLRYSRHILLDEIDIEGQTRLLQGHALVIGAGGLGSPAAMYLASAGVGHITLVDH 60
           M+D QLLRYSRHILLDEI IEGQ+RLL  HALVIGAGGLG+ A  YLA+AG+G +T+VD 
Sbjct: 1   MNDNQLLRYSRHILLDEIGIEGQSRLLAAHALVIGAGGLGAAALPYLAAAGIGTLTIVDD 60

Query: 61  DTVDLTNLQRQIMHTTARVGQPKVASGREALQQINPGVQVTALAERVEGERLGG 114
           D+VDLTNLQRQI+HTT  VG PKV S R+A+ ++NP V+V A+ +R++ + +G 
Sbjct: 61  DSVDLTNLQRQIIHTTESVGHPKVESARQAIARLNPEVRVHAVRQRLDADGIGA 114


>thiF [H] COG0476 Dinucleotide-utilizing enzymes involved in
           molybdopterin and thiamine biosynthesis family 2 Eco
           Escherichia coli K12
          Length = 245

 Score =  119 bits (297), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 57/106 (53%), Positives = 77/106 (72%)

Query: 7   LRYSRHILLDEIDIEGQTRLLQGHALVIGAGGLGSPAAMYLASAGVGHITLVDHDTVDLT 66
           +RYSR ILLD+I ++GQ +LL    L+IG GGLG+PAA+YLA AGVG + L D D V L+
Sbjct: 1   MRYSRQILLDDIALDGQQKLLDSQVLIIGLGGLGTPAALYLAGAGVGTLVLADDDDVHLS 60

Query: 67  NLQRQIMHTTARVGQPKVASGREALQQINPGVQVTALAERVEGERL 112
           NLQRQI+ TT  + +PK    ++ L Q+NP +Q+TAL +R+ GE L
Sbjct: 61  NLQRQILFTTEDIDRPKSQVSQQRLTQLNPDIQLTALQQRLTGEAL 106


>moeB [H] COG0476 Dinucleotide-utilizing enzymes involved in
           molybdopterin and thiamine biosynthesis family 2 Eco
           Escherichia coli K12
          Length = 249

 Score =  119 bits (297), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 55/101 (54%), Positives = 74/101 (73%)

Query: 1   MDDQQLLRYSRHILLDEIDIEGQTRLLQGHALVIGAGGLGSPAAMYLASAGVGHITLVDH 60
           + DQ++LRY+R I+L   D +GQ  L     L++G GGLG  A+ YLASAGVG++TL+D 
Sbjct: 4   LSDQEMLRYNRQIILRGFDFDGQEALKDSRVLIVGLGGLGCAASQYLASAGVGNLTLLDF 63

Query: 61  DTVDLTNLQRQIMHTTARVGQPKVASGREALQQINPGVQVT 101
           DTV L+NLQRQ +H+ A VGQPKV S R+AL +INP + +T
Sbjct: 64  DTVSLSNLQRQTLHSDATVGQPKVESARDALTRINPHIAIT 104