BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0012.0107.p (225 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value BMEI1312 [S] COG1284 Uncharacterized conserved protein Bme Bruce... 152 5e-37 AGc869 [S] COG1284 Uncharacterized conserved protein Atu Agrobac... 142 8e-34 AGc867 [S] COG1284 Uncharacterized conserved protein Atu Agrobac... 141 1e-33 SMc02240 [S] COG1284 Uncharacterized conserved protein Sme Sinor... 138 1e-32 VC0940 [S] COG1284 Uncharacterized conserved protein Vch Vibrio ... 79 7e-15 >BMEI1312 [S] COG1284 Uncharacterized conserved protein Bme Brucella melitensis Length = 217 Score = 152 bits (385), Expect = 5e-37, Method: Compositional matrix adjust. Identities = 84/220 (38%), Positives = 127/220 (57%), Gaps = 8/220 (3%) Query: 4 STADSSPSSPIASAPPARATPPATPAVRHSWIDNLQGQLFGVVMIAFGMSMLHSLGLIIG 63 ADS+PS AS+P RH ++ L G IA G+++ L+ G Sbjct: 3 DIADSAPSLADASSP--------ISVDRHRLYEDAIAMLIGTSFIALGITLYSHAMLMTG 54 Query: 64 QIAGVAFLVTYATGISFGMAFTLINLPFYLLAALRMGAAFTWRTLAAVTAVSVLTNVAGN 123 AG+A L+ YATG FG+ + LINLPFY A RMG AFT RT AAV +S T + Sbjct: 55 STAGIALLIHYATGTGFGLLYFLINLPFYYFAVRRMGWAFTIRTFAAVALLSGFTRLMPL 114 Query: 124 YISYSHLDPAVGAVLAGLCVGIGLIGLFRHQASCGGMSILATYVQERTGFKAGWLLMGFD 183 + ++ ++P A++ G +G+G++ LFRH++ GG++ILA Y+Q+ G +AGW +G D Sbjct: 115 SVDFTSINPLFAALMGGTLMGMGVLALFRHRSGVGGVNILALYLQDAYGIRAGWFQLGLD 174 Query: 184 LALFATAALFLPMDRVFYSLVGAITMNLFVAWNHRYEWYI 223 + + + F+P + + SLVGA+ MN+ +A NH+ YI Sbjct: 175 VLIMLASLFFIPWENMVLSLVGAVAMNVIIAINHKPGRYI 214 >AGc869 [S] COG1284 Uncharacterized conserved protein Atu Agrobacterium tumefaciens strain C58 (Cereon) Length = 237 Score = 142 bits (357), Expect = 8e-34, Method: Compositional matrix adjust. Identities = 75/194 (38%), Positives = 118/194 (60%) Query: 31 RHSWIDNLQGQLFGVVMIAFGMSMLHSLGLIIGQIAGVAFLVTYATGISFGMAFTLINLP 90 RHS +++ Q L G ++I+ G+++ + GL+ G + G+AFL YA+G SFG F L NLP Sbjct: 43 RHSLLEDAQAILAGSMLISLGVTLFSAAGLLTGGVVGLAFLAHYASGFSFGAVFFLANLP 102 Query: 91 FYLLAALRMGAAFTWRTLAAVTAVSVLTNVAGNYISYSHLDPAVGAVLAGLCVGIGLIGL 150 FY LA R+G AFT +T A+ ++L+ + ++ ++P A+ GL V G++ L Sbjct: 103 FYYLAFRRLGLAFTVKTFCAIATTALLSEYMPGFFAFESINPIAAALFGGLTVAAGMLAL 162 Query: 151 FRHQASCGGMSILATYVQERTGFKAGWLLMGFDLALFATAALFLPMDRVFYSLVGAITMN 210 FRH+ S GG ILA Y+Q+R G++AG + + FD + + + S++GA+ MN Sbjct: 163 FRHRTSLGGFGILALYLQDRFGWRAGLVQLAFDGMVLGCSFFVATPFVILCSILGALVMN 222 Query: 211 LFVAWNHRYEWYIA 224 L +A NHR + YIA Sbjct: 223 LTLAVNHRNDRYIA 236 >AGc867 [S] COG1284 Uncharacterized conserved protein Atu Agrobacterium tumefaciens strain C58 (Cereon) Length = 230 Score = 141 bits (356), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 88/198 (44%), Positives = 130/198 (65%), Gaps = 1/198 (0%) Query: 26 ATPAVRHSWIDNLQGQLFGVVMIAFGMSMLHSLGLIIGQIAGVAFLVTYATGISFGMAFT 85 + PA RH+ ++++QG + G ++ A G +L +GL+ G AGVAFL+ YA GISFG+ F Sbjct: 31 SDPA-RHAPVEDVQGIVTGAIVSALGFYLLAKVGLLTGGTAGVAFLLHYAFGISFGLLFF 89 Query: 86 LINLPFYLLAALRMGAAFTWRTLAAVTAVSVLTNVAGNYISYSHLDPAVGAVLAGLCVGI 145 L+NLPFY L+ R+G AF+ +T A+ VSVLT V ++ ++P A+L GL +G Sbjct: 90 LVNLPFYYLSFRRLGLAFSCKTFIAIGLVSVLTEVEARWMVIDSINPLWAALLGGLLLGY 149 Query: 146 GLIGLFRHQASCGGMSILATYVQERTGFKAGWLLMGFDLALFATAALFLPMDRVFYSLVG 205 GL+ L+RH+AS GG+ ILA Y+Q+R G +AG + + FD + A L + V YS+VG Sbjct: 150 GLLALYRHRASLGGIGILAIYIQDRFGIRAGLIQLAFDACVMLCAFLVIDPATVAYSIVG 209 Query: 206 AITMNLFVAWNHRYEWYI 223 A +N+F+A NHR + YI Sbjct: 210 AFVLNIFLAINHRSDRYI 227 >SMc02240 [S] COG1284 Uncharacterized conserved protein Sme Sinorhizobium meliloti Length = 211 Score = 138 bits (347), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 84/198 (42%), Positives = 124/198 (62%) Query: 27 TPAVRHSWIDNLQGQLFGVVMIAFGMSMLHSLGLIIGQIAGVAFLVTYATGISFGMAFTL 86 T RH+ ++++QG G ++ A G+ L S GL+ G AGVAFL+ YATG++FG+ F L Sbjct: 13 TSPTRHTPVEDVQGVFSGSLVAALGLYFLASAGLLTGSTAGVAFLLHYATGVNFGLTFFL 72 Query: 87 INLPFYLLAALRMGAAFTWRTLAAVTAVSVLTNVAGNYISYSHLDPAVGAVLAGLCVGIG 146 +NLPF+ L+ R+G AFT +T A+ S LT++ + P A++ GL +G G Sbjct: 73 LNLPFFYLSLKRLGPAFTLKTFIAIALTSFLTDMQSRLFEIGQIHPGWAALIGGLLLGYG 132 Query: 147 LIGLFRHQASCGGMSILATYVQERTGFKAGWLLMGFDLALFATAALFLPMDRVFYSLVGA 206 L+ L+RH+AS GG+ IL Y+QER G +AG + + DL + A A V +S++GA Sbjct: 133 LLALYRHRASLGGVGILGIYLQERFGIRAGLVQLAIDLVVLAAAFFVTTPTVVIWSVLGA 192 Query: 207 ITMNLFVAWNHRYEWYIA 224 + +NLFVA NHR + YIA Sbjct: 193 VVLNLFVAINHRADRYIA 210 >VC0940 [S] COG1284 Uncharacterized conserved protein Vch Vibrio cholerae Length = 198 Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust. Identities = 59/192 (30%), Positives = 102/192 (53%) Query: 31 RHSWIDNLQGQLFGVVMIAFGMSMLHSLGLIIGQIAGVAFLVTYATGISFGMAFTLINLP 90 +HS ++ L G ++A G+ L + L+ G G+A L+T ++FG+ + L N P Sbjct: 3 KHSHKEDWIAILTGTFLVAQGVYFLQAGQLLTGGTTGLALLMTQFLPLTFGVLYFLSNCP 62 Query: 91 FYLLAALRMGAAFTWRTLAAVTAVSVLTNVAGNYISYSHLDPAVGAVLAGLCVGIGLIGL 150 FYLLA R GA F + + + VS+ + I+ ++ AV GL +G+G++ L Sbjct: 63 FYLLAWKRFGARFAFNSAISGALVSIFADHLAMLITLEKVNVVYCAVAGGLLMGLGMLIL 122 Query: 151 FRHQASCGGMSILATYVQERTGFKAGWLLMGFDLALFATAALFLPMDRVFYSLVGAITMN 210 FRH++S GG ++L ++Q+R G G M D + + F+ + S++GA +N Sbjct: 123 FRHRSSLGGFNVLCLFIQDRFGISVGKSQMAIDGLILLASFFFVSPLTIGLSILGAFLLN 182 Query: 211 LFVAWNHRYEWY 222 + +A NH+ Y Sbjct: 183 IVLAMNHKPSRY 194