BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0012.0071.p (483 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value PA2266 [C] COG2010 Cytochrome c, mono- and diheme variants Pae P... 475 e-133 PA4571_1 [C] COG2010 Cytochrome c, mono- and diheme variants Pae... 334 3e-91 RSc0772 [C] COG2010 Cytochrome c, mono- and diheme variants Rso ... 277 4e-74 PA4619 [C] COG2010 Cytochrome c, mono- and diheme variants Pae P... 238 2e-62 PA1600 [C] COG2010 Cytochrome c, mono- and diheme variants Pae P... 221 2e-57 >PA2266 [C] COG2010 Cytochrome c, mono- and diheme variants Pae Pseudomonas aeruginosa Length = 439 Score = 475 bits (1222), Expect = e-133, Method: Compositional matrix adjust. Identities = 221/392 (56%), Positives = 288/392 (73%), Gaps = 1/392 (0%) Query: 83 LLLRGAYLARAGDCVACHTSKGGAPFAGGLALASPIGAIYSTNITPDKEHGIGDWSYEDF 142 L+ +G YLARAGDCVACHT++ G PFAGGL + +PIGA+YSTNITPD++ GIGD+S+EDF Sbjct: 27 LVRQGEYLARAGDCVACHTARDGKPFAGGLPMETPIGAVYSTNITPDRKTGIGDYSFEDF 86 Query: 143 ARLMRTGVTKAGYTVYPAMPYPSYSRLTDEDMQALYAYFTKAVPPSAQANRANDIPWPLS 202 R +R GV ++G T+YPAMPYPSY+R+++ DM+ALYAYF V P Q N+A+DIPWPLS Sbjct: 87 DRAVRHGVARSGDTLYPAMPYPSYARVSEADMRALYAYFMHGVEPVEQPNKASDIPWPLS 146 Query: 203 MRWPLAIWRKLFAPTPAPYAAPAGTDAQLARGAYLVEGLGHCGSCHTPRSTTMQEKSLRD 262 MRWPLA WR FAP + A AG D LARGAYLVEGLGHCG+CHTPR MQEK+L Sbjct: 147 MRWPLAFWRWTFAPEVKDFQAAAGQDPVLARGAYLVEGLGHCGACHTPRGLGMQEKALAA 206 Query: 263 DSSRLYLSGGQVVDGWSVPSLRNEHGGGIAGWSQADLVEFLRTGRNQYTASFGAMNDVIE 322 YLSG ++ W SLR +H G+ WS+ADLV FLRTGR++ +A FG M+DV+ Sbjct: 207 SDGAAYLSGSAPLENWIAKSLRGDHRTGLGSWSEADLVSFLRTGRSERSAVFGGMSDVVV 266 Query: 323 HSMQYMTEADLNAMSRYLLSLAPRNGA-EPYRYDEATATAAYEGRPQTPGAALYLDRCAA 381 HSMQYMT+ADL A++RYL SL P + A +P+ YDE+ A A + G GAALY+D C A Sbjct: 267 HSMQYMTDADLTAIARYLKSLPPADPADQPHVYDESVAQALFHGDDSKTGAALYVDNCGA 326 Query: 382 CHRSNGTGYGKAFPALAGNPVLQTGDATSAIRIILQGGRQPSTDSATAGLVMAPYAQLLN 441 CHR++G GY + FPALAGNPV+ D TS + I+L+GG P+T A + M P+ +N Sbjct: 327 CHRTDGKGYARVFPALAGNPVVTGSDPTSLVHIVLKGGTLPATHQAPSSFTMPPFGWRMN 386 Query: 442 DQQVAEVTSYIQTAWGNRGATVSAADVAKIRK 473 DQ++A+V ++I+T+WGN+ +VS +V ++RK Sbjct: 387 DQEIADVVNFIRTSWGNQAPSVSVDEVRRLRK 418 >PA4571_1 [C] COG2010 Cytochrome c, mono- and diheme variants Pae Pseudomonas aeruginosa Length = 441 Score = 334 bits (857), Expect = 3e-91, Method: Compositional matrix adjust. Identities = 170/402 (42%), Positives = 246/402 (61%), Gaps = 19/402 (4%) Query: 77 PSADDQLLLRGAYLARAGDCVACHTSKGGAPFAGGLALASPIGAIYSTNITPDKEHGIGD 136 P+ D L+ +G Y+A+ GDC+ACHT GAP AGGL L +P+G IYSTNITPD+E GIG Sbjct: 26 PTTDAALIEKGRYVAQLGDCIACHTGPQGAPMAGGLELKTPMGTIYSTNITPDRETGIGR 85 Query: 137 WSYEDFARLMRTGVTKAGYTVYPAMPYPSYSRLTDEDMQALYAYFTKAVPPSAQANRAND 196 +S+E+F R MR GVT G +YPAMPYPSY+++++EDM+ALYAY V P QAN + Sbjct: 86 YSFEEFDRAMRKGVTAEGVNLYPAMPYPSYAKISEEDMRALYAYLMHGVQPVTQANTPSA 145 Query: 197 IPWPLSMRWPLAIWRKLFAPTPAPYAAPAGTDAQLARGAYLVEGLGHCGSCHTPRSTTMQ 256 + WP + RW L++W F AP+ + D + RGAYLV+GLGHCG+CHTPR Q Sbjct: 146 MSWPFNQRWGLSLWNWAFL-DDAPFTPSSDADPVINRGAYLVQGLGHCGACHTPRGIAFQ 204 Query: 257 EKSLRD--DSSRLYLSGGQVVDGWSVPSLRNEHGGGIAGWSQADLVEFLRTGRNQYTASF 314 EK++ + S + YL+ G+ V+ W SLRN W+ D V+ L+TG+N++ Sbjct: 205 EKAMSEAGRSGQFYLA-GETVEQWQALSLRNL-------WTVEDTVQLLKTGQNRFATVS 256 Query: 315 GAMNDVIEHSMQYMTEADLNAMSRYLLSLAPRNGAEPYRYDE---ATATAAYEGRPQTPG 371 G+M DVI HS Q+ ++ DL A++ YL SL P E A Y R G Sbjct: 257 GSMTDVIHHSTQHFSDDDLLAIASYLKSLPAGKDDLPMPDSERPLAAPVDLYSSR----G 312 Query: 372 AALYLDRCAACHRSNGTGYGKAFPALAGNPVLQTGDATSAIRIILQGGRQPSTDSATAGL 431 Y C+ CHR +G+G FP LAGNP + + + ++ + I L G + T + + Sbjct: 313 GLGYAQFCSDCHRKDGSGVPGMFPPLAGNPTVASANPSTLLHITLTGWKTAQTATHSRVY 372 Query: 432 VMAPYAQLLNDQQVAEVTSYIQTAWGNRGATVSAADVAKIRK 473 M +AQ L D+++AE+ S+++++WGN+G+++ A V K+R+ Sbjct: 373 TMPGFAQ-LEDREIAEILSFVRSSWGNQGSSIDAGQVKKLRQ 413 >RSc0772 [C] COG2010 Cytochrome c, mono- and diheme variants Rso Ralstonia solanacearum Length = 429 Score = 277 bits (709), Expect = 4e-74, Method: Compositional matrix adjust. Identities = 162/400 (40%), Positives = 228/400 (57%), Gaps = 17/400 (4%) Query: 84 LLRGAYLARAGDCVACHTSKGGAPFAGGLALASP-IGAIYSTNITPDKEHGIGDWSYEDF 142 + RG YLA AGDCVACHT+ GG PFAGGL L P +G IYS+NITPD + GIG W YEDF Sbjct: 33 IKRGEYLAIAGDCVACHTAPGGKPFAGGLPLQIPMLGTIYSSNITPDPKTGIGKWRYEDF 92 Query: 143 ARLMRTGVTKAGYTVYPAMPYPSYSRLTDEDMQALYAYFTKAVPPSAQANRANDIPWPLS 202 R +R GV+ G +YPAMPYPSY+++ D DM+ LYAYF V A I WPL+ Sbjct: 93 ERAVRQGVSDDGENLYPAMPYPSYAKINDADMRDLYAYFRYGVAAVQYAPPPGTIRWPLN 152 Query: 203 MRWPLAIWRKLFAPTPAPYAAPAGTDAQLARGAYLVEGLGHCGSCHTPRSTTMQEKSLRD 262 MRWPL +W F APY RGAYL +GL HCG+CHTPR MQEK++ D Sbjct: 153 MRWPLKLWNLAFLKR-APYLPKGDMTPTWNRGAYLAQGLAHCGTCHTPRGFAMQEKAM-D 210 Query: 263 DSSRLYLSGGQVVDGWSVPSLRNEHGGGIAGWSQADLVEFLRTGRN-QYTASFGAMNDVI 321 + + YL+G + GWS ++ ++ GI GW +V++LRTG + G M + + Sbjct: 211 ERGKGYLAGSTLA-GWSAYNITSDPVSGIGGWKPEQIVQYLRTGSVPGIGQAAGPMGEAV 269 Query: 322 EHSMQYMTEADLNAMSRYLLSL-APRNGAEPYRY---DEATATAAYEGRP---QTPGAAL 374 +HS MTE D+ A++ YL ++ A GA+ R+ AT A G+P A L Sbjct: 270 QHSFSRMTERDVRAIAEYLRTVPAVSTGAQRARHGWGTPATDVIALRGKPIETTIDAARL 329 Query: 375 YLDRCAACHRSNGTGYGKA-FPALAGNPVLQTGDATSAIRIILQGGRQPSTDSATAGLVM 433 YL CA CH+++G G +P L N + D + ++++L G + + D M Sbjct: 330 YLGNCATCHQADGRGTPDGYYPPLLHNSAVGARDTRNLVQVMLHGIERRAGDRHIG---M 386 Query: 434 APYAQLLNDQQVAEVTSYIQTAWGNRGA-TVSAADVAKIR 472 + + L+D Q+A + +Y+ +G+ ++A ++AK R Sbjct: 387 PAFGRQLSDAQLAALANYVTRQFGDPATPALTADEIAKRR 426 >PA4619 [C] COG2010 Cytochrome c, mono- and diheme variants Pae Pseudomonas aeruginosa Length = 415 Score = 238 bits (608), Expect = 2e-62, Method: Compositional matrix adjust. Identities = 149/393 (37%), Positives = 206/393 (52%), Gaps = 21/393 (5%) Query: 83 LLLRGAYLARAGDCVACHTSKGGAPFAGGLALASPIGAIYSTNITPDKEHGIGDWSYEDF 142 L+ RG YLARA DC+ACHT++GGAPFAGGL + SP G IY TNITPDKEHGIG +S ++F Sbjct: 29 LVKRGEYLARAADCMACHTAEGGAPFAGGLPIQSPFGTIYGTNITPDKEHGIGAYSADEF 88 Query: 143 ARLMRTGVTKAGYTVYPAMPYPSYSRLTDEDMQALYAYFTKAVPPSAQANRANDIPWPLS 202 + G K G +YPAMPY SY + ED A+YAY A P A+ + +P + Sbjct: 89 FAALTEGKRKDGAYLYPAMPYTSYHLIEREDADAIYAYLM-AQEPIARPAPQTSLSFPFN 147 Query: 203 MRWPLAIWRKLFAPTPAPYAAPAGTDAQLARGAYLVEGLGHCGSCHTPRSTTMQEKSLRD 262 +R LA W L+ + G RG Y+VE LGHCG CHTPR+ +L Sbjct: 148 VRMGLAGWNLLYGKS-VRLQPEEGRSEAWKRGQYMVEVLGHCGECHTPRNLA---GALEQ 203 Query: 263 DSSRLYLSGGQVVDGWSVPSLRNEHGGGIA--GWSQADLVEFLRTGRNQYTASFGAMNDV 320 D LSGG +++G+ PSL G +A GW+Q DL FL+ G + + F M V Sbjct: 204 DKR---LSGG-LLNGYLAPSLLP---GDLAARGWTQPDLASFLKHGMSAQGSMFNEMFPV 256 Query: 321 IEHSMQYMTEADLNAMSRYLLSLAPRNGAEPYRYDEATAT-AAYEGRPQTPGAALYLDRC 379 + HS Q++ + DL AM+ YLL P EA + GR Q YL+ C Sbjct: 257 VHHSTQHLDDGDLAAMATYLLGDQPPPAKVVQALPEAQLNDSGKRGRQQ------YLNVC 310 Query: 380 AACHRSNGTGYGKAFPALAGNPVLQTGDATSAIRIILQGGRQPSTDSATAGLVMAPYAQL 439 A CH G G A+ GN L+ D + +R+I G + M +A Sbjct: 311 AGCHGGEGEGKPHIAVAMNGNTTLRLQDPRNLLRVIEDGIVEQQFTGFERMQPMPGFAGK 370 Query: 440 LNDQQVAEVTSYIQTAWGNRGATVSAADVAKIR 472 L+D+Q+ ++ +Y++ WG + VA+++ Sbjct: 371 LDDEQLTDLLNYLRQTWGGLPGDLGPQQVAQLK 403 >PA1600 [C] COG2010 Cytochrome c, mono- and diheme variants Pae Pseudomonas aeruginosa Length = 433 Score = 221 bits (564), Expect = 2e-57, Method: Compositional matrix adjust. Identities = 147/402 (36%), Positives = 204/402 (50%), Gaps = 18/402 (4%) Query: 82 QLLLRGAYLARAGDCVACHTSKGGAPFAGGLALASPIGAIYSTNITPDKEHGIGDWSYED 141 + + RG LA GDC CHT +GG AGG AL +P G IYS+N+TPD+ GIG WSY Sbjct: 44 EQIARGERLAALGDCAVCHTREGGPRNAGGRALPTPFGTIYSSNLTPDRASGIGGWSYPA 103 Query: 142 FARLMRTGVTKAGYTVYPAMPYPSYSRLTDEDMQALYAYFTKAVPPSAQANRANDIPWPL 201 F R MR GV + G +YPA PY +++R DED++ALYAY + P AN +P+P Sbjct: 104 FERAMRHGVARDGSYLYPAFPYTAFTRTRDEDLKALYAYLM-SQPAVHSETPANQLPFPF 162 Query: 202 SMRWPLAIWRKLFAPTPAPYAAPAGTDAQLARGAYLVEGLGHCGSCHTPRSTTMQEKSLR 261 R +A W LF P Y + Q RGAYL EGLGHC +CH+PR+ EK Sbjct: 163 DQRQLMAGWNLLFL-DPGAYRDEPTRNQQWNRGAYLAEGLGHCSACHSPRNALGAEK--- 218 Query: 262 DDSSRLYLSGGQVVDGWSVPSLRNEHGGGIAGWSQADLVEFLRTGRNQYTA-SFGAMNDV 320 S + +GG+ +GW+ P+L IA WS+ L +LR G + Y + G M V Sbjct: 219 --SGSAHFAGGE-AEGWTAPALNASSPAPIA-WSEEALYAYLRHGYSAYHGVASGPMAPV 274 Query: 321 IEHSMQYMTEADLNAMSRYLLSLAPRNGAEPYRYDEATATAAYEGRPQTP---GAALYLD 377 + + + DL A++ YL S A E + GR Q P GA L+ Sbjct: 275 VGEGLAKQPDEDLRALAHYLASYAAAPAGETDQQQAQRLDRQGYGRVQPPSGSGARLFAG 334 Query: 378 RCAACHRS-NGTGYGKAFPALAGNPVLQTGDATSAIRIILQGGRQPSTDSATAGLVMAPY 436 C ACH +G + P+LA N + + +RIIL G P+T M + Sbjct: 335 ACLACHHDGDGPRFFGVRPSLALNSNVHADSPDNLLRIILDGIHSPATGDLG---YMPGF 391 Query: 437 AQLLNDQQVAEVTSYIQTAWGNRGATVS-AADVAKIRKTAKP 477 L+D+QVA + +Y++ + + A AA A +R+ A P Sbjct: 392 RHSLDDRQVATLANYLRERFAGKPAWPDLAAKAASLRRQAAP 433