BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0012.0020.p         (80 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

RSc0241 [S] COG4317 Uncharacterized protein conserved in bacteri...   114   7e-26
SMa1820 Non COG                                                        93   2e-19
AGl1747 [S] COG4317 Uncharacterized protein conserved in bacteri...    77   7e-15

>RSc0241 [S] COG4317 Uncharacterized protein conserved in bacteria Rso
          Ralstonia solanacearum
          Length = 96

 Score =  114 bits (284), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 56/78 (71%), Positives = 64/78 (82%)

Query: 1  MKPYLISLLMGLLAGLIYAALHVQSPAPPIIALLGLLGMLIGEQLVPIVRRKLAGEPLSA 60
          MKPYLISL  G+L G+IYA LHV+SPAPP IAL+GLLGMLIGEQ+VP  +R LAGEPL+ 
Sbjct: 1  MKPYLISLGAGILVGIIYALLHVRSPAPPTIALVGLLGMLIGEQIVPAAQRLLAGEPLTV 60

Query: 61 AWFHRECMPKITGTPPPD 78
          AWF  EC+PKITG P P 
Sbjct: 61 AWFRHECVPKITGAPSPK 78


>SMa1820 Non COG
          Length = 102

 Score = 92.8 bits (229), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 43/79 (54%), Positives = 62/79 (78%)

Query: 1  MKPYLISLLMGLLAGLIYAALHVQSPAPPIIALLGLLGMLIGEQLVPIVRRKLAGEPLSA 60
          MK YL+SL  GLL G+IY+ L+V+SPAPP+IAL+GLLG+L+GEQ VP+V+R ++G P++ 
Sbjct: 7  MKMYLLSLGAGLLVGVIYSLLNVRSPAPPVIALVGLLGILVGEQAVPLVKRLMSGNPVNI 66

Query: 61 AWFHRECMPKITGTPPPDA 79
          +WF+  C+P + G  P  A
Sbjct: 67 SWFNSHCIPHVFGELPTGA 85


>AGl1747 [S] COG4317 Uncharacterized protein conserved in bacteria Atu
          Agrobacterium tumefaciens strain C58 (Cereon)
          Length = 117

 Score = 77.4 bits (189), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 35/65 (53%), Positives = 52/65 (80%)

Query: 1  MKPYLISLLMGLLAGLIYAALHVQSPAPPIIALLGLLGMLIGEQLVPIVRRKLAGEPLSA 60
          MK YL+SL  GLL G++Y+ L+V+SPAPP+IAL+GLLG+L+GEQ++P  R  +  EP + 
Sbjct: 22 MKVYLLSLGAGLLVGIVYSLLNVRSPAPPVIALVGLLGILVGEQIIPFARSIIDREPAAV 81

Query: 61 AWFHR 65
          +WF++
Sbjct: 82 SWFNQ 86