BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0012.0015.p (212 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value PA4182 [K] COG2808 Transcriptional regulator Pae Pseudomonas aer... 295 7e-80 RSp0689 [K] COG2808 Transcriptional regulator Rso Ralstonia sola... 274 8e-74 mll0013 [K] COG2808 Transcriptional regulator Mlo Mesorhizobium ... 165 8e-41 mlr6176 [K] COG2808 Transcriptional regulator Mlo Mesorhizobium ... 159 5e-39 BH0412 [K] COG2808 Transcriptional regulator Bha Bacillus halodu... 130 1e-30 >PA4182 [K] COG2808 Transcriptional regulator Pae Pseudomonas aeruginosa Length = 212 Score = 295 bits (754), Expect = 7e-80, Method: Compositional matrix adjust. Identities = 143/210 (68%), Positives = 160/210 (76%) Query: 1 MYIPDHFADQDTASLHQLITAHPFGVLVSHTASGLDANHLPCHLDPAQGALGTLHLHVAR 60 MY+P HF + D +LH LI +P G+LVSH +GLDANHLP L PA+GA GTL HVAR Sbjct: 1 MYLPSHFEESDPQALHALIRDYPLGLLVSHGEAGLDANHLPFELSPAKGAQGTLEAHVAR 60 Query: 61 ANPLWRELADGDEVLVVFSAGDAYISPSWYPSKHEAHRQVPTWNYSVAHAHGRVTIRDDE 120 NP+W EL DGDEVLVVF AGDAYISP WYPSK E HRQVPTWNY V HAHGRV IRDDE Sbjct: 61 NNPVWSELRDGDEVLVVFRAGDAYISPQWYPSKQEHHRQVPTWNYRVVHAHGRVRIRDDE 120 Query: 121 RYLRGVVARLTRTHEAGEAKPWKMSDAPADYTDTLLKAIVGIEIEITRLEGKRKLSQNKD 180 RY+RG+VARLTRTHEA + PWKM+D PADY D +L+ IVGIEIEITRL GK KLSQNK+ Sbjct: 121 RYVRGLVARLTRTHEATQETPWKMTDGPADYIDEMLRLIVGIEIEITRLVGKFKLSQNKE 180 Query: 181 VRDIEGAGRTLAERGHLQLGEAMLQEAARK 210 RDI GA L RG +G AM AAR+ Sbjct: 181 ARDIRGASAALLARGEQAIGAAMDDCAARR 210 >RSp0689 [K] COG2808 Transcriptional regulator Rso Ralstonia solanacearum Length = 212 Score = 274 bits (701), Expect = 8e-74, Method: Compositional matrix adjust. Identities = 131/212 (61%), Positives = 157/212 (74%) Query: 1 MYIPDHFADQDTASLHQLITAHPFGVLVSHTASGLDANHLPCHLDPAQGALGTLHLHVAR 60 MY+P F + T LH L+ +PFG LV+H SGLDANH+P L+ +G LG LH HVAR Sbjct: 1 MYVPTDFDEPHTEVLHALMAQYPFGTLVTHGKSGLDANHIPFLLNADEGRLGVLHAHVAR 60 Query: 61 ANPLWRELADGDEVLVVFSAGDAYISPSWYPSKHEAHRQVPTWNYSVAHAHGRVTIRDDE 120 ANP+W+++ADGDEVLV+F AGDAYISP+WYPSK E HR VPTWNY V HAHGR+ IRDDE Sbjct: 61 ANPVWQDVADGDEVLVIFHAGDAYISPNWYPSKPEHHRHVPTWNYRVVHAHGRIAIRDDE 120 Query: 121 RYLRGVVARLTRTHEAGEAKPWKMSDAPADYTDTLLKAIVGIEIEITRLEGKRKLSQNKD 180 R++RGV+ RLTR HEA + PWKM+DAPADY LLK IVGIEIEITRL GK KL QN++ Sbjct: 121 RFVRGVLGRLTRAHEASQPVPWKMADAPADYVSALLKEIVGIEIEITRLVGKAKLGQNRE 180 Query: 181 VRDIEGAGRTLAERGHLQLGEAMLQEAARKQQ 212 RD GA L G +G+AML A K++ Sbjct: 181 ARDARGAATALKASGKDIIGDAMLACLAEKRE 212 >mll0013 [K] COG2808 Transcriptional regulator Mlo Mesorhizobium loti Length = 216 Score = 165 bits (417), Expect = 8e-41, Method: Compositional matrix adjust. Identities = 81/193 (41%), Positives = 114/193 (59%), Gaps = 2/193 (1%) Query: 1 MYIPDHFADQDTASLHQLITAHPFGVLVSHTASGLDANHLPCHLDPAQGALGTLHLHVAR 60 MY P HF + LH LI AHP G+L+S+ G AN +P LD + G L H+A+ Sbjct: 1 MYEPPHFQETRPDVLHGLIRAHPLGMLISNGPDGPVANAIPFLLDAEGLSNGRLRAHLAK 60 Query: 61 ANPLWRELAD--GDEVLVVFSAGDAYISPSWYPSKHEAHRQVPTWNYSVAHAHGRVTIRD 118 ANP WR +AD VL+VF DAY++PSWY +K E + VPTWNY++ G + D Sbjct: 61 ANPHWRLIADNPASPVLIVFQGADAYVTPSWYETKRETGKVVPTWNYAIVQVRGTAKVID 120 Query: 119 DERYLRGVVARLTRTHEAGEAKPWKMSDAPADYTDTLLKAIVGIEIEITRLEGKRKLSQN 178 D+ +L +A LT + E PW ++DAP + + +K I+G+EIEI+ + GK K+SQN Sbjct: 121 DQEWLAQQIADLTGSQEGARQAPWAVTDAPPPFIQSQIKGIIGLEIEISEIHGKWKVSQN 180 Query: 179 KDVRDIEGAGRTL 191 + V D G + L Sbjct: 181 RPVADRAGVAQGL 193 >mlr6176 [K] COG2808 Transcriptional regulator Mlo Mesorhizobium loti Length = 207 Score = 159 bits (402), Expect = 5e-39, Method: Compositional matrix adjust. Identities = 86/192 (44%), Positives = 109/192 (56%), Gaps = 1/192 (0%) Query: 1 MYIPDHFADQDTASLHQLITAHPFGVLVSHTASGLDANHLPCHLDPAQGALGTLHLHVAR 60 MYIP F D D L I A V+ TA G A LP LD ++G G ++ H+A+ Sbjct: 1 MYIPPAFRDDDKECLRATIRAALLANFVTVTAEGPLATPLPLFLDESEGEHGVIYGHLAK 60 Query: 61 ANPLWRELADGDEVLVVFSAGDAYISPSWYPSKHEAHRQVPTWNYSVAHAHGRVTIRDDE 120 ANP R GD L +F DAY++P+WY +K E + VPTWNY HA+G V +D Sbjct: 61 ANPQCRVPPLGDG-LAIFMGPDAYVTPAWYATKRETGKVVPTWNYVAVHAYGPVEFFEDA 119 Query: 121 RYLRGVVARLTRTHEAGEAKPWKMSDAPADYTDTLLKAIVGIEIEITRLEGKRKLSQNKD 180 L VV RLT HE A PW +SDAP D+ L+ IVG+ + ITRLEGKRK+SQN++ Sbjct: 120 GRLLDVVNRLTDHHEGERASPWAVSDAPPDFIQAQLRGIVGLRMPITRLEGKRKMSQNRN 179 Query: 181 VRDIEGAGRTLA 192 D G LA Sbjct: 180 AADRAGVAAGLA 191 >BH0412 [K] COG2808 Transcriptional regulator Bha Bacillus halodurans Length = 209 Score = 130 bits (328), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 79/216 (36%), Positives = 109/216 (50%), Gaps = 11/216 (5%) Query: 1 MYIPDHFADQDTASLHQLITAHPFGVLVSHTASGLDANHLPCHLDPAQGALGTLHLHVAR 60 MYIP F D L I H FG++VS T A HLP LD +G G L H+AR Sbjct: 1 MYIPKAFHVDDVNELITFIRNHSFGIMVSQTEEEPFATHLPFLLDEQKGENGVLISHLAR 60 Query: 61 ANPLWRELADGDEVLVVFSAGDAYISPSWYPSKHEAHRQVPTWNYSVAHAHGRVTIRDDE 120 ANP W+ L D +VLVVF AYISP+WY + R VPTWNY H +G D+ Sbjct: 61 ANPHWQGLQD-QKVLVVFQGPHAYISPTWY----DEPRTVPTWNYVAVHVYGTFRQIQDK 115 Query: 121 RYLRGVVARLTRTHEAGEAKPWK-MSDAPADYTDTLLKAIVGIEIEITRLEGKRKLSQNK 179 ++ + + +E PW+ + D P + + LL IV EIE+ R+EG KL+QN Sbjct: 116 HKVKEWIEKTVNVYEQTMNPPWEAVFDEP--FMEGLLNGIVAFEIEVERMEGNWKLNQNH 173 Query: 180 DVRDIEGAGRTLA---ERGHLQLGEAMLQEAARKQQ 212 + E + L E ++ E M +E ++ + Sbjct: 174 PIERQERVVKKLKSINEPNAQKMAELMEKEIEKRNK 209