BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0012.0014.p         (201 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

VCA0380 [S] COG3575 Uncharacterized protein conserved in bacteri...   154   1e-37
YPO2986 [S] COG3575 Uncharacterized protein conserved in bacteri...   129   5e-30
SP0260 [S] COG3575 Uncharacterized protein conserved in bacteria...   114   1e-25
alr0472 [S] COG3575 Uncharacterized protein conserved in bacteri...    97   2e-20
L95481 [S] COG3575 Uncharacterized protein conserved in bacteria...    84   3e-16

>VCA0380 [S] COG3575 Uncharacterized protein conserved in bacteria Vch
           Vibrio cholerae
          Length = 201

 Score =  154 bits (389), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 74/164 (45%), Positives = 95/164 (57%), Gaps = 7/164 (4%)

Query: 32  LQAVRSLALPDAWIGAGFVRNAVWDALHGRPATAPHSDIDVIWFDPAACSPEQDLALEAE 91
           L+ V  L LP  +I AGFVRN VWD+LH      P +DIDVI+FD      + + +LE +
Sbjct: 41  LECVYQLELPQCYIAAGFVRNLVWDSLHHNVKLTPLNDIDVIFFDADCLDSDYEKSLELK 100

Query: 92  LTMACPGPQWSVRNQARMHLRNGDGPYTCATDALRYWPETATAVAVRLTREDRIEIAAPL 151
           L+   P   W V+NQA+MHL+NGD PY    DA+ YWPE  TAVAVR    DR E  +  
Sbjct: 101 LSEQMPQLNWQVKNQAKMHLQNGDNPYQSTLDAMSYWPEKETAVAVRKVEHDRYECISAF 160

Query: 152 GLQDLWQGLL--RPAGAFATDKQAQFAARVHGRGWLARWPQLRV 193
           G + L+QG +   P  A+       F  RV  +GWLA WP LR+
Sbjct: 161 GFESLFQGFITHNPKRAYGI-----FENRVKSKGWLAMWPNLRI 199


>YPO2986 [S] COG3575 Uncharacterized protein conserved in bacteria Ype
           Yersinia pestis
          Length = 201

 Score =  129 bits (323), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 80/186 (43%), Positives = 95/186 (51%), Gaps = 27/186 (14%)

Query: 32  LQAVRSLALPDAWIGAGFVRNAVWDALHGRPATAPHSDIDVIWFDPAACSPEQDLALEAE 91
           L   R L L    + AGFVRN VWD LHG  +  P +DID+++FD    S + DL LEA 
Sbjct: 21  LYTARELGLNQWCLAAGFVRNLVWDQLHGYLSPTPLNDIDLVYFDKKDISEQHDLQLEAL 80

Query: 92  L-TMACPGPQ------------------WSVRNQARMHLRNGDGPYTCATDALRYWPETA 132
           L     P  Q                  WSV+NQARMHL +G  PYT   DA+ YW E  
Sbjct: 81  LLNKHMPHKQTVHKQMVHKQTAQKNRFPWSVKNQARMHLHSGRLPYTSTEDAISYWVEIE 140

Query: 133 TAVAVRLTREDRIEIAAPLGLQDLW--QGLLRPA-GAFATDKQAQFAARVHGRGWLARWP 189
           TA+  RLT E  IE+ APLGL  L+     L P  G  AT     F  RV+ + WL  WP
Sbjct: 141 TAIGARLTDEGEIELIAPLGLAALFALTVTLNPKNGELAT-----FDQRVNSKSWLQHWP 195

Query: 190 QLRVVA 195
            L VVA
Sbjct: 196 NLHVVA 201


>SP0260 [S] COG3575 Uncharacterized protein conserved in bacteria Spn
           Streptococcus pneumoniae TIGR4
          Length = 190

 Score =  114 bits (285), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 59/166 (35%), Positives = 87/166 (52%), Gaps = 4/166 (2%)

Query: 29  LPLLQAVRSLALPDAWIGAGFVRNAVWDALHGRPATAPHSDIDVIWFDPAACSPEQDLAL 88
           + +L  +R L L D+W+ AG VRN +W+ L  +      +DIDVI+FDP   S E+ L L
Sbjct: 21  MAILTIIRDLGLKDSWLAAGSVRNFIWNLLSDKSPFDHETDIDVIFFDP-DFSYEETLLL 79

Query: 89  EAELTMACPGPQWSVRNQARMHLRN-GDGPYTCATDALRYWPETATAVAVRLTREDRIEI 147
           E +L    P  QW ++NQ  MH  +     YT + DA+  +PE  TAV +RL  E   E+
Sbjct: 80  EKKLREDFPQYQWELKNQVYMHQHSPHTASYTSSRDAMSKYPERCTAVGLRLNEELDFEL 139

Query: 148 AAPLGLQDLWQGLLRPAGAF--ATDKQAQFAARVHGRGWLARWPQL 191
             P GL+D+    +RP   F    D+   +  R+  + W  +W  L
Sbjct: 140 YVPYGLEDILNFQVRPTPHFLENEDRMELYQTRLSKKNWQEKWKNL 185


>alr0472 [S] COG3575 Uncharacterized protein conserved in bacteria Nos
           Nostoc sp. PCC 7120
          Length = 179

 Score = 97.1 bits (240), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 51/134 (38%), Positives = 72/134 (53%), Gaps = 2/134 (1%)

Query: 32  LQAVRSLALPDAWIGAGFVRNAVWDALHGRPATAPHSDIDVIWFDPAACSPEQDLALEAE 91
           L+ +  + LP+ W+  G VRN VW ++ G        D D+ +FD A  + EQ+LA E  
Sbjct: 20  LETISQVNLPNWWLAGGAVRNTVWRSIFGNNCKLFIKDFDIAFFDEAG-NREQELAAENY 78

Query: 92  LTMACPGPQWSVRNQARM-HLRNGDGPYTCATDALRYWPETATAVAVRLTREDRIEIAAP 150
           LT  CP   + V+NQA     R  + PYT   + +  W  TATAV VRL  + + E   P
Sbjct: 79  LTEKCPNYLFDVKNQASFARWRTSERPYTSTEEGIENWLHTATAVGVRLNLQGQWEFFTP 138

Query: 151 LGLQDLWQGLLRPA 164
            GL DL+ G++RP 
Sbjct: 139 YGLDDLFAGIIRPT 152


>L95481 [S] COG3575 Uncharacterized protein conserved in bacteria Lla
           Lactococcus lactis
          Length = 192

 Score = 83.6 bits (205), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 55/178 (30%), Positives = 83/178 (46%), Gaps = 10/178 (5%)

Query: 29  LPLLQAVRSLALPDAWIGAGFVRNAVWDALHGRPATAPHSDIDVIWFDP---AACSPEQD 85
           + +L  V  L LP+ ++ AG V   VW+   G        DID+++FD    A  S + D
Sbjct: 18  MFILDEVSVLNLPNYYLAAGSVFQTVWNYSDGNNLMTGIHDIDIVYFDKEISADSSAKND 77

Query: 86  LALEAELTMACPGPQWSVRNQARMHL-RNGDG-PYTCATDALRYWPETATAVAVRLTRED 143
             LE  L+   P  Q+ + N+A MHL  NG+  PY    +A+  W  T  AV +      
Sbjct: 78  KKLEKVLSEKFP-YQFDIHNEAYMHLWHNGNKVPYKNTENAIERWIATVHAVGIS-GNSS 135

Query: 144 RIEIAAPLGLQDLWQGLLRPAGAFATDKQAQFAARVHGRGWLARWPQLRVVAAQDAIE 201
            IEI AP GL+D++   +RP   +  D           R W  R+  L+++   D I+
Sbjct: 136 NIEIFAPYGLEDIFTKTIRP--IYHVDNNRILYENKVAR-WQERFSNLKIIEWSDEIK 190