BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0011.0042.p (636 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value PA2520 [P] COG3696 Putative silver efflux pump Pae Pseudomonas a... 894 0.0 RSp0493 [P] COG3696 Putative silver efflux pump Rso Ralstonia so... 857 0.0 CC2390 Non COG 746 0.0 CC2724 Non COG 654 0.0 RSp0530 [P] COG3696 Putative silver efflux pump Rso Ralstonia so... 427 e-119 >PA2520 [P] COG3696 Putative silver efflux pump Pae Pseudomonas aeruginosa Length = 1051 Score = 894 bits (2311), Expect = 0.0, Method: Compositional matrix adjust. Identities = 449/619 (72%), Positives = 536/619 (86%), Gaps = 4/619 (0%) Query: 1 LTRSERFHEVFAAAKEARRPLLFGQIIIMIVYLPMFALTGVEGKMFTPMAFTVVAALIGA 60 LTR+ERFHEVFAA++EARR L+FGQIIIM+VYLP+FALTGVEGKMF PMAFTVV AL+GA Sbjct: 432 LTRAERFHEVFAASREARRALVFGQIIIMVVYLPIFALTGVEGKMFHPMAFTVVTALLGA 491 Query: 61 MILSVTFIPAAIALFIGEKVAEKENFIMVGAKRLYEPALKVIMENKAVVLTFAAALIVVC 120 MILSVTF+PAAIALFI KV E+ENF+M A+ YEPAL+ ++ ++A+V+ A I++ Sbjct: 492 MILSVTFVPAAIALFITGKVKEEENFVMRRARLAYEPALRWVLGHRALVVGGALGAILLT 551 Query: 121 GVVATRLGAEFVPSLNEGDIAIQALRIPGTSLTQSIEMQKSIEKALVKKFPEVERVFARS 180 G+VA+R+G+EF+PSL+EGD A+Q LR+PGTSLTQS+EMQ+++E+ L+ KFPE+ERVFAR+ Sbjct: 552 GLVASRMGSEFIPSLSEGDFAMQGLRVPGTSLTQSVEMQQTLERKLMGKFPEIERVFART 611 Query: 181 GTAEVASDPMPPNISDGYIMLKPEAQWPEPKKTHAELLTAIQAEVAKIPGNNYEFSQPIQ 240 GTAE+ASD MPPN SD Y+MLKP++QWP+PKK+ LL +QA ++PG+ YEFSQPIQ Sbjct: 612 GTAEIASDLMPPNASDSYVMLKPQSQWPDPKKSREALLEELQAAALEVPGSVYEFSQPIQ 671 Query: 241 LRFNELISGVRSDVAVKIFGDDMNVLNDTAGKISAVLEKIPGATEVKIEQTTGLPMLTVN 300 LRFNELISGVRSDVAVK+FGDDM VLNDTA KIS VL+ I GA+EVK+EQTTGLP+LTV+ Sbjct: 672 LRFNELISGVRSDVAVKVFGDDMQVLNDTAEKISKVLQGIDGASEVKVEQTTGLPVLTVD 731 Query: 301 IDRQKTARYGLNVSDIQDTIATAIGGKEAGTLFQGDRRFGIVVRLPDNSRTDLEAIRRLP 360 IDR K AR+GLNV DIQDT+ATA+GG+ AGTLF+GDRRF IV+RLP+ R DL A+ L Sbjct: 732 IDRDKAARFGLNVGDIQDTVATALGGRNAGTLFEGDRRFDIVIRLPETLRADLPALSNLL 791 Query: 361 IALPLQDGNTRTSYVPLGEVAALDIAPGPNQISREDGKRRIVVSANVRGRDLGGFVADAE 420 I LP + R ++PL +VA LD++PGPNQISRE+GKRRIVVSANVRGRD+G FV +A+ Sbjct: 792 IPLP-PNNLARIDFIPLSDVARLDLSPGPNQISRENGKRRIVVSANVRGRDIGSFVLEAQ 850 Query: 421 RQLQAQVKIPTGYWTTWGGQFENLQSATQRLQIVIPVALLMVFVLLFVMFNNVKDGMLVF 480 ++LQ VKIP GYWTTWGGQFE LQSA +RLQ+V+PVALL+VF LLF MFNNVKDG+LVF Sbjct: 851 QKLQDGVKIPAGYWTTWGGQFEQLQSAAKRLQVVVPVALLLVFTLLFAMFNNVKDGLLVF 910 Query: 481 TGIPFALTGGILALALRDIPMSISAAVGFIALSGVAVLNGLVMISFIRSLREEGRSLDQA 540 TGIPFALTGG+LAL LR IP+SISAAVGFIALSGVAVLNGLVMISFIR+L +EGRSLDQA Sbjct: 911 TGIPFALTGGVLALWLRGIPLSISAAVGFIALSGVAVLNGLVMISFIRNLLQEGRSLDQA 970 Query: 541 IHEGAMTRLRPVLMTALVASLGFVPMALATGTGAEVQRPLATVVIGGILSSTALTLLVLP 600 + EGA+TRLRPVLMTALVASLGFVPMALATGTGAEVQRPLATVVIGGILSST LTLLVLP Sbjct: 971 VWEGAITRLRPVLMTALVASLGFVPMALATGTGAEVQRPLATVVIGGILSSTMLTLLVLP 1030 Query: 601 LLYKLAHNKD---EDEAPA 616 +LY+ H +D +E PA Sbjct: 1031 VLYRWTHGRDAGPREETPA 1049 >RSp0493 [P] COG3696 Putative silver efflux pump Rso Ralstonia solanacearum Length = 1064 Score = 857 bits (2215), Expect = 0.0, Method: Compositional matrix adjust. Identities = 425/611 (69%), Positives = 506/611 (82%), Gaps = 9/611 (1%) Query: 1 LTRSERFHEVFAAAKEARRPLLFGQIIIMIVYLPMFALTGVEGKMFTPMAFTVVAALIGA 60 LTR+ERF EVF AA+EARRPLL+GQ+IIM+VYLP+FAL+GVEGKMF PMA TVV AL A Sbjct: 432 LTRAERFEEVFQAAREARRPLLYGQLIIMVVYLPIFALSGVEGKMFHPMAITVVLALAAA 491 Query: 61 MILSVTFIPAAIALFIGEKVAEKENFIMVGAKRLYEPALKVIMENKAVVLTFAAALIVVC 120 M+LS+TF+PAA+AL +GE+VAEKEN +M A+R+Y P L+ + AVVLTFAA + V Sbjct: 492 MVLSITFVPAAVALGMGERVAEKENRLMGWARRMYAPLLERALAAPAVVLTFAAVAVSVS 551 Query: 121 GVVATRLGAEFVPSLNEGDIAIQALRIPGTSLTQSIEMQKSIEKALVKKFPEVERVFARS 180 V A RLGAEFVP+LNEGD +IQA+R+PGT L QS+EMQ IE+ L KFPE+ RVFAR+ Sbjct: 552 LVAALRLGAEFVPNLNEGDFSIQAMRVPGTGLAQSLEMQMQIERTLKAKFPEIARVFART 611 Query: 181 GTAEVASDPMPPNISDGYIMLKPEAQWPE----PKKTHAELLTAIQAEVAKIPGNNYEFS 236 GTAE+A+D MPP+ISDGYIML+PE WP ++ +LL I+A V +PGN YEFS Sbjct: 612 GTAEIATDVMPPSISDGYIMLRPEQDWPAGPDGTRRDRDQLLADIRATVETLPGNAYEFS 671 Query: 237 QPIQLRFNELISGVRSDVAVKIFGDDMNVLNDTAGKISAVLEKIPGATEVKIEQTTGLPM 296 QPIQLRFNELISGVRSDVAVK+FGDDM VL A I+A L ++ GA EVKIEQT GLP Sbjct: 672 QPIQLRFNELISGVRSDVAVKLFGDDMAVLEKQAQAIAAQLGRLAGAAEVKIEQTGGLPF 731 Query: 297 LTVNIDRQKTARYGLNVSDIQDTIATAIGGKEAGTLFQGDRRFGIVVRLPDNSRTDLEAI 356 L ++IDR+K ARYGL + IQDT++ AIGGK AGT+FQGDRRFGIVVRLP+ +R+D A+ Sbjct: 732 LNIDIDREKAARYGLAIGAIQDTVSAAIGGKGAGTVFQGDRRFGIVVRLPEAARSDPAAL 791 Query: 357 RRLPIALPLQDGNTRTSYVPLGEVAALDIAPGPNQISREDGKRRIVVSANVRGRDLGGFV 416 RLP+ALP G YVPL EVA L GPNQ+SREDGKRRIVVSANVRGRD+ FV Sbjct: 792 GRLPLALPNGQG-----YVPLSEVATLHEVTGPNQVSREDGKRRIVVSANVRGRDIASFV 846 Query: 417 ADAERQLQAQVKIPTGYWTTWGGQFENLQSATQRLQIVIPVALLMVFVLLFVMFNNVKDG 476 +A+R L AQ+++P GYW WGGQFE LQSAT+RLQ+V+P+AL +VF LLF+MF N+KDG Sbjct: 847 QEAQRALDAQIRLPAGYWMAWGGQFEQLQSATERLQVVVPLALALVFTLLFMMFGNLKDG 906 Query: 477 MLVFTGIPFALTGGILALALRDIPMSISAAVGFIALSGVAVLNGLVMISFIRSLREEGRS 536 +LVF+GIPFAL+GG++ALALR IP+SISAAVGFIALSGVAVLNGLVM+SFIRSLRE+G+ Sbjct: 907 LLVFSGIPFALSGGVVALALRGIPLSISAAVGFIALSGVAVLNGLVMLSFIRSLREDGKP 966 Query: 537 LDQAIHEGAMTRLRPVLMTALVASLGFVPMALATGTGAEVQRPLATVVIGGILSSTALTL 596 +D A+ EGA+TRLRPVLMTALVASLGFVPMALATGTGAEVQRPLATVVIGGILSSTALTL Sbjct: 967 VDAAVREGALTRLRPVLMTALVASLGFVPMALATGTGAEVQRPLATVVIGGILSSTALTL 1026 Query: 597 LVLPLLYKLAH 607 LVLP+LY+LA+ Sbjct: 1027 LVLPVLYRLAY 1037 >CC2390 Non COG Length = 1057 Score = 746 bits (1927), Expect = 0.0, Method: Compositional matrix adjust. Identities = 369/609 (60%), Positives = 473/609 (77%), Gaps = 2/609 (0%) Query: 1 LTRSERFHEVFAAAKEARRPLLFGQIIIMIVYLPMFALTGVEGKMFTPMAFTVVAALIGA 60 L+R ERF V A E RP LFG +II +VY+P+FALTGVEGKMF PMA TVV AL A Sbjct: 446 LSRDERFALVAGATSEVIRPSLFGVLIITLVYVPIFALTGVEGKMFHPMAITVVIALTAA 505 Query: 61 MILSVTFIPAAIALFIGEKVAEKENFIMVGAKRLYEPALKVIMENKAVVLTFAAALIVVC 120 ++LS+TF+PAA+ALF+ KV EKEN IM GA+RLYEPAL+ + + + A L+ + Sbjct: 506 LVLSLTFVPAAVALFVTGKVEEKENLIMRGARRLYEPALETALRLRVAFVAGAVLLVAIA 565 Query: 121 GVVATRLGAEFVPSLNEGDIAIQALRIPGTSLTQSIEMQKSIEKALVKKFPEVERVFARS 180 A+R+G+EFVP+L+EGDIA+ ALRIPGTSL+Q+I MQ ++E A VK PEV+RV ++ Sbjct: 566 AFAASRMGSEFVPNLDEGDIAMHALRIPGTSLSQAIAMQTALE-AKVKTLPEVDRVVSKI 624 Query: 181 GTAEVASDPMPPNISDGYIMLKPEAQWPEPKKTHAELLTAIQAEVAKIPGNNYEFSQPIQ 240 GTAEVA+DPMPP+++D +IMLK WP+P+K A+L+ ++A VAK+PGNNYEF+QPIQ Sbjct: 625 GTAEVATDPMPPSVADTFIMLKDRKDWPDPRKPRAQLVAELEAVVAKVPGNNYEFTQPIQ 684 Query: 241 LRFNELISGVRSDVAVKIFGDDMNVLNDTAGKISAVLEKIPGATEVKIEQTTGLPMLTVN 300 +RFNEL+SGVR+DVAVK+FGDD++ L +I V+E + GA +V +EQ TGLP+L + Sbjct: 685 MRFNELLSGVRADVAVKVFGDDLDQLLAIGEQIGGVIEGVEGAQDVGVEQVTGLPVLQIT 744 Query: 301 IDRQKTARYGLNVSDIQDTIATAIGGKEAGTLFQGDRRFGIVVRLPDNSRTDLEAIRRLP 360 DR AR GLNV D+Q +ATAIGG G +F+GDRRF +VVRLP+ R ++ I RL Sbjct: 745 PDRAALARLGLNVDDVQSVVATAIGGTVTGQVFEGDRRFDVVVRLPEAVRGRIDDIGRLR 804 Query: 361 IALPLQDGNTRTSYVPLGEVAALDIAPGPNQISREDGKRRIVVSANVRGRDLGGFVADAE 420 I LP R +VPL +VA +++ GPNQISREDGKRRIVV+ANVRGRDLG F+ + + Sbjct: 805 IPLPGAIDQPR-GFVPLQDVARIEMVIGPNQISREDGKRRIVVTANVRGRDLGSFITEVQ 863 Query: 421 RQLQAQVKIPTGYWTTWGGQFENLQSATQRLQIVIPVALLMVFVLLFVMFNNVKDGMLVF 480 R++ AQV++PTGYW T+GG FE L SA QRLQ+V+P ALL++F LL+ +F +VKD +VF Sbjct: 864 RKVGAQVELPTGYWITYGGAFEQLISAAQRLQLVVPAALLLIFGLLYALFRSVKDAAIVF 923 Query: 481 TGIPFALTGGILALALRDIPMSISAAVGFIALSGVAVLNGLVMISFIRSLREEGRSLDQA 540 +G+P ALTGG+ AL LR +P+SISA VGFIALSGVAVLNG+VM+SFIR+LR++G +D A Sbjct: 924 SGVPLALTGGVAALLLRGMPLSISAGVGFIALSGVAVLNGVVMVSFIRTLRQQGTDVDHA 983 Query: 541 IHEGAMTRLRPVLMTALVASLGFVPMALATGTGAEVQRPLATVVIGGILSSTALTLLVLP 600 I EGA+TRLRPVLMTALVASLGFVPMA G GAEVQRPLATVVIGGI+SST LTL VLP Sbjct: 984 IREGALTRLRPVLMTALVASLGFVPMAFNVGAGAEVQRPLATVVIGGIISSTLLTLQVLP 1043 Query: 601 LLYKLAHNK 609 LY+LA+++ Sbjct: 1044 ALYRLAYSQ 1052 >CC2724 Non COG Length = 1080 Score = 654 bits (1687), Expect = 0.0, Method: Compositional matrix adjust. Identities = 329/618 (53%), Positives = 438/618 (70%), Gaps = 1/618 (0%) Query: 1 LTRSERFHEVFAAAKEARRPLLFGQIIIMIVYLPMFALTGVEGKMFTPMAFTVVAALIGA 60 LT SER HE AA+E P ++GQ II++VY P+ TGVEGK F+PMA TV+ AL A Sbjct: 456 LTSSERLHETREAAREMIAPTVYGQAIILLVYAPLLTFTGVEGKTFSPMAITVMLALAAA 515 Query: 61 MILSVTFIPAAIALFIGEKVAEKENFIMVGAKRLYEPALKVIMENKAVVLTFAAALIVVC 120 +LS+TFIPA +AL I KVAEKE ++ AK Y P L+ + V+ A L VV Sbjct: 516 FVLSLTFIPAMVALLIRGKVAEKEVALVRWAKVGYAPLLRKAVARPWPVIAAATGLFVVA 575 Query: 121 GVVATRLGAEFVPSLNEGDIAIQALRIPGTSLTQSIEMQKSIEKALVKKFPEVERVFARS 180 + T LG EF P L+E D+A+QALRIP TSL QS+ MQ+ IE+ + FPEVE V++++ Sbjct: 576 MITFTFLGREFTPQLDEKDLAVQALRIPSTSLEQSLRMQRQIERT-IAAFPEVEFVYSKT 634 Query: 181 GTAEVASDPMPPNISDGYIMLKPEAQWPEPKKTHAELLTAIQAEVAKIPGNNYEFSQPIQ 240 GTAEVASDPMPPN SD +I+LK + +WP+ K++ A+L+ ++ ++ + GN YEFSQPIQ Sbjct: 635 GTAEVASDPMPPNASDSFIILKAQDEWPDSKQSKAQLVDRMERKLEGLTGNVYEFSQPIQ 694 Query: 241 LRFNELISGVRSDVAVKIFGDDMNVLNDTAGKISAVLEKIPGATEVKIEQTTGLPMLTVN 300 +RFNELI+GVR DVA+K++GDD+ + +A +I+ VL + GA +VK+EQT+G P L V+ Sbjct: 695 MRFNELIAGVRGDVAIKVYGDDLAAMTASADQIAGVLRGVRGAADVKVEQTSGFPTLDVS 754 Query: 301 IDRQKTARYGLNVSDIQDTIATAIGGKEAGTLFQGDRRFGIVVRLPDNSRTDLEAIRRLP 360 +DR R GL V ++ DT+A A+GG+ +G +FQGDRRF +VVRLP+ +R DL+AI LP Sbjct: 755 LDRDAIGRLGLTVEEVADTLAVAMGGRASGLVFQGDRRFEVVVRLPEATRNDLDAIGALP 814 Query: 361 IALPLQDGNTRTSYVPLGEVAALDIAPGPNQISREDGKRRIVVSANVRGRDLGGFVADAE 420 + LP VPL +VA + G NQ+SRE+GKRR+VV ANVRG DLG FV++A+ Sbjct: 815 VMLPHGASAGPRLSVPLRDVARFSFSEGLNQVSRENGKRRVVVQANVRGNDLGSFVSEAQ 874 Query: 421 RQLQAQVKIPTGYWTTWGGQFENLQSATQRLQIVIPVALLMVFVLLFVMFNNVKDGMLVF 480 ++ AQ+++P G W W GQFENL++A RL +V+P+ L++F LL++ + VF Sbjct: 875 AKVSAQIELPAGSWVEWSGQFENLKAAQSRLSLVVPLCFLLIFALLYMALGGFAPALAVF 934 Query: 481 TGIPFALTGGILALALRDIPMSISAAVGFIALSGVAVLNGLVMISFIRSLREEGRSLDQA 540 + IP AL GG+ LALR IP S+SAAVGFIALSGVAVLNGLVM++ IR +G +L+QA Sbjct: 935 SAIPLALAGGVFGLALRGIPFSVSAAVGFIALSGVAVLNGLVMMTAIRQRLAQGLALEQA 994 Query: 541 IHEGAMTRLRPVLMTALVASLGFVPMALATGTGAEVQRPLATVVIGGILSSTALTLLVLP 600 I GAM RLRPV+MT LVASLGFVPMALAT TGAEVQRPLATVVIGG++++TALTL VLP Sbjct: 995 IIAGAMERLRPVMMTGLVASLGFVPMALATETGAEVQRPLATVVIGGLITATALTLFVLP 1054 Query: 601 LLYKLAHNKDEDEAPAEA 618 + + + P A Sbjct: 1055 AICRFVLRQAPKATPEPA 1072 >RSp0530 [P] COG3696 Putative silver efflux pump Rso Ralstonia solanacearum Length = 1049 Score = 427 bits (1098), Expect = e-119, Method: Compositional matrix adjust. Identities = 259/615 (42%), Positives = 380/615 (61%), Gaps = 24/615 (3%) Query: 6 RFHEVFAAAKEARRPLLFGQIIIMIVYLPMFALTGVEGKMFTPMAFTVVAALIGAMILSV 65 R + A E P++FG II++V+LP+ L G+EGKMF P+AFT+ AL +++LS+ Sbjct: 435 RVRVILHAVTEVATPVIFGVGIIILVFLPLMTLQGMEGKMFAPLAFTIAIALFISLVLSL 494 Query: 66 TFIPAAIALFIGEKVAEK----------------ENFIMVGAKRLYEPALKVIMENKAVV 109 T P + + K ++ + +++ K+ Y L++ + N Sbjct: 495 TLTPVLSSYLLKPKASKHAGGDHADDAHAQHDAHDTWLIRKLKKPYLRLLELSLNNGRKT 554 Query: 110 LTFAAALIVVCGVVATRLGAEFVPSLNEGDIAIQALRIPGTSLTQSIEMQKSIEKALVKK 169 + A A+ G + LG F+P + EG I R P SL +S+ M+ + LV + Sbjct: 555 VAVAVAVFFATGALMPFLGTAFIPEMKEGSIVPGINRAPNISLEESVRMEMEAMR-LVMQ 613 Query: 170 FPEVERVFARSGTAEVASDPMPPNISDGYIMLKPEAQWPEPKKTHAELLTAIQAEVAKIP 229 P V + G E +DP N S + LKP QWP+ T ++ A++ + +P Sbjct: 614 VPGVRSAVSGVGRGESPADPQGQNESTPIVSLKPRDQWPK-GWTQDDIAEAMRRALQALP 672 Query: 230 GNNYEFSQPIQLRFNELISGVRSDVAVKIFGDDMNVLNDTAGKISAVLEKIPGATEVKIE 289 G +QPI R +E+++GVRSDVA+K+FGDD+ VL + A I+ V + I GA ++++E Sbjct: 673 GVQIVMAQPISDRVDEMVTGVRSDVAIKVFGDDLAVLREKAEAIARVAQGIQGAQDMRVE 732 Query: 290 QTTGLPMLTVNIDRQKTARYGLNVSDIQDTIATAIGGKEAGTLFQGDRRFGIVVRLPDNS 349 + TG L + IDRQ AR+GLN SD+ + I TAIGGKEA +F+G+RRFG VVRLP+ Sbjct: 733 RITGQQYLQIAIDRQAIARHGLNASDVHNVIETAIGGKEATEIFEGERRFGAVVRLPEAY 792 Query: 350 RTDLEAIRRLPIALPLQDGNTRTSYVPLGEVAALDIAPGPNQISREDGKRRIVVSANVRG 409 R +EAIR L +A P + VPL +A +++ GP QISRE GKRR+VV NVR Sbjct: 793 RGSVEAIRNLIVAAP------NGAQVPLESLARIEVTDGPAQISRELGKRRVVVGVNVRD 846 Query: 410 RDLGGFVADAERQLQAQVKIPTGYWTTWGGQFENLQSATQRLQIVIPVALLMVFVLLFVM 469 RDLGGFVA+ + + +VK+P GY+ WGGQF+N++ A L++++P+ + +F LLF++ Sbjct: 847 RDLGGFVAELQAAVAQKVKLPEGYYLEWGGQFQNMERAMGHLKVIVPITVAAIFFLLFLL 906 Query: 470 FNNVKDGMLVFTGIPFALTGGILALALRDIPMSISAAVGFIALSGVAVLNGLVMISFIRS 529 FN+V+ L+ +PFA GGIL L + +S+ A+VGF+AL G+AVLNG+V++S IRS Sbjct: 907 FNSVRYATLIILVLPFASVGGILGLFVTGEYLSVPASVGFVALWGIAVLNGVVLVSTIRS 966 Query: 530 LREEGRSLDQAIHEGAMTRLRPVLMTALVASLGFVPMALATGTGAEVQRPLATVVIGGIL 589 LRE+G S+D+++ GA R RPV+MTA VA LG +P ATG G+EVQRPLA VVIGG+L Sbjct: 967 LREQGMSVDESVRLGARLRFRPVMMTATVAMLGLIPFLFATGPGSEVQRPLAIVVIGGLL 1026 Query: 590 SSTALTLLVLPLLYK 604 + T LTL++LP LYK Sbjct: 1027 TCTLLTLVMLPTLYK 1041