BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0011.0041.p         (173 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

PA0397 [P] COG1230 Co/Zn/Cd efflux system component Pae Pseudomo...   194   1e-49
BMEI1438 [P] COG1230 Co/Zn/Cd efflux system component Bme Brucel...   169   2e-42
DR1102 [P] COG1230 Co/Zn/Cd efflux system component Dra Deinococ...   142   4e-34
XF0866 [P] COG1230 Co/Zn/Cd efflux system component Xfa Xylella ...   135   5e-32
BS_czcD [P] COG1230 Co/Zn/Cd efflux system component Bsu Bacillu...   118   7e-27

>PA0397 [P] COG1230 Co/Zn/Cd efflux system component Pae Pseudomonas
           aeruginosa
          Length = 299

 Score =  194 bits (492), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 89/158 (56%), Positives = 119/158 (75%), Gaps = 1/158 (0%)

Query: 4   KDESLNVKGAYLEVWSDMLGSLGVIAGALIIRFTGWDWVDTVIAVAIGLWVLPRTWTLLK 63
           +  SLNVKGAYLEVWSDMLGSLGVI  A++IRFTGW WVD+++AV IG WVLPRTW LL+
Sbjct: 142 QGNSLNVKGAYLEVWSDMLGSLGVIVAAIVIRFTGWAWVDSLVAVLIGFWVLPRTWILLR 201

Query: 64  ESINVLLEATPAHVNKDDIQEAILGVEGAQSIHDLHIWSISSNKVSLTAHVVYDARANNI 123
           ES++VLLE  P  +   +++EA+LG+ G   +HDLH+WSI+S K+SLT+H+VYD    + 
Sbjct: 202 ESLHVLLEGVPKEIQLAELREALLGIPGVTGLHDLHVWSITSGKISLTSHLVYDPALVDA 261

Query: 124 E-VLGKIRKLLGEKFDIHHVTLQLEDQPCEQAAEQHTF 160
           E +LG ++ LL ++++I H TLQLE   C QA E   +
Sbjct: 262 EALLGTVKALLHDRYEIEHSTLQLETSACAQAEEPLAY 299


>BMEI1438 [P] COG1230 Co/Zn/Cd efflux system component Bme Brucella
           melitensis
          Length = 301

 Score =  169 bits (429), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 82/148 (55%), Positives = 103/148 (69%)

Query: 4   KDESLNVKGAYLEVWSDMLGSLGVIAGALIIRFTGWDWVDTVIAVAIGLWVLPRTWTLLK 63
           KD+SLNVKGAYLEVW+DMLGS+GVIA A+II  TGW+WVD+ IAV IG  V PRTW LLK
Sbjct: 147 KDDSLNVKGAYLEVWADMLGSVGVIAAAIIIYLTGWEWVDSAIAVGIGFMVFPRTWVLLK 206

Query: 64  ESINVLLEATPAHVNKDDIQEAILGVEGAQSIHDLHIWSISSNKVSLTAHVVYDARANNI 123
           E IN+LLE  PA  +   ++ AIL V G  S+HDLH+WS++  + SLTAH+V    A+  
Sbjct: 207 ECINILLEGVPAGGDVKKLEAAILAVPGVASVHDLHVWSLTKTEHSLTAHLVLAQEADGE 266

Query: 124 EVLGKIRKLLGEKFDIHHVTLQLEDQPC 151
            V   +  +L   +D+HH TLQ E   C
Sbjct: 267 TVRRAVEHVLQNDYDLHHTTLQTEKVTC 294


>DR1102 [P] COG1230 Co/Zn/Cd efflux system component Dra Deinococcus
           radiodurans
          Length = 325

 Score =  142 bits (358), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 72/142 (50%), Positives = 99/142 (69%), Gaps = 3/142 (2%)

Query: 6   ESLNVKGAYLEVWSDMLGSLGVIAGALIIRFTGWDWVDTVIAVAIGLWVLPRTWTLLKES 65
           E LN++ AYLEV  D+LGS+ VIAGAL+IR TGW WVD ++   IGLWVLPRTW+LLK S
Sbjct: 174 EGLNLRAAYLEVLGDLLGSVAVIAGALLIRLTGWSWVDPLLGAGIGLWVLPRTWSLLKTS 233

Query: 66  INVLLEATPAHVNKDDIQEAILGVEGAQSIHDLHIWSISSNKVSLTAHVVYDARANNIEV 125
           +NVLLE  P  ++ D ++  +  + G Q +HDLH+WS++   V+LTAH+V D RA   E+
Sbjct: 234 VNVLLEGVPEGLDLDALRAELRALPGVQDVHDLHVWSVTGGVVNLTAHLVSD-RAPA-EL 291

Query: 126 LGKIRKLLGEKFDIHHVTLQLE 147
           L  + + +     I HVT+Q+E
Sbjct: 292 LPAVHE-VAHGAGIEHVTVQVE 312


>XF0866 [P] COG1230 Co/Zn/Cd efflux system component Xfa Xylella fastidiosa
           9a5c
          Length = 321

 Score =  135 bits (339), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 74/148 (50%), Positives = 100/148 (67%)

Query: 4   KDESLNVKGAYLEVWSDMLGSLGVIAGALIIRFTGWDWVDTVIAVAIGLWVLPRTWTLLK 63
           + E+L++KGAYLEVWSDMLGS+ VI  A++I  TGW WVD V+AV IGLWVLPRTW LL 
Sbjct: 164 RGENLSMKGAYLEVWSDMLGSVAVIVAAIVIYVTGWYWVDPVLAVLIGLWVLPRTWVLLG 223

Query: 64  ESINVLLEATPAHVNKDDIQEAILGVEGAQSIHDLHIWSISSNKVSLTAHVVYDARANNI 123
           E++NVLLE  P       I++A+    G  ++HD+H+W++ S    LTAHVV        
Sbjct: 224 EAVNVLLEGVPKGFELLPIRDALSHHPGVANVHDVHLWALGSRMPLLTAHVVALQGTAPD 283

Query: 124 EVLGKIRKLLGEKFDIHHVTLQLEDQPC 151
            +   +++LL E+F I HVTLQ+E + C
Sbjct: 284 RLRRMLQELLHERFSIEHVTLQIEIEHC 311


>BS_czcD [P] COG1230 Co/Zn/Cd efflux system component Bsu Bacillus subtilis
          Length = 311

 Score =  118 bits (295), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 71/178 (39%), Positives = 102/178 (57%), Gaps = 8/178 (4%)

Query: 1   MSRKD--ESLNVKGAYLEVWSDMLGSLGVIAGALIIRFTGWDWVDTVIAVAIGLWVLPRT 58
           MS  D   +LN++GAYL V SDMLGS+G I  A++I F GW W D + ++ + + VL   
Sbjct: 136 MSGGDTKNNLNIRGAYLHVISDMLGSVGAILAAILIIFFGWGWADPLASIIVAILVLRSG 195

Query: 59  WTLLKESINVLLEATPAHVNKDDIQEAILGVEGAQSIHDLHIWSISSNKVSLTAHVVYDA 118
           + + K+SI++L+E TP +++  DI   I G EG Q+IHDLHIWSI+S   +L+ H V D 
Sbjct: 196 YNVTKDSIHILMEGTPENIDVSDIIRTIEGTEGIQNIHDLHIWSITSGLNALSCHAVVDD 255

Query: 119 RANNIE---VLGKIRKLLGEKFDIHHVTLQLEDQPCEQAAEQHTFSPIGKEDEYDHQH 173
           +    E   +L KI   L  K  I HVT+Q+E +      +         E + DH H
Sbjct: 256 QLTISESENILRKIEHELEHK-GITHVTIQMETEAHNH--DNAILCQPKMEKQRDHHH 310