BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0011.0031.p         (497 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

PA0435 Non COG                                                        371   e-102

>PA0435 Non COG
          Length = 492

 Score =  371 bits (952), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 220/484 (45%), Positives = 288/484 (59%), Gaps = 10/484 (2%)

Query: 8   LRRWTYLTHRWCGVAGCLLMALWFVSGMVMLFIGYPKLTPWDRLAALPAL----SAAPQL 63
           ++R+ YL HRW G+  CLLM LWFVSGMVML++GYPKLTP +RLA LP L    +  P  
Sbjct: 1   MKRYLYLWHRWLGIGCCLLMVLWFVSGMVMLYVGYPKLTPLERLAHLPELDGCEACVPLR 60

Query: 64  PSQVMGDAPVSRLV-LNAASGQARYIVQRADGNLTSIDASNGVQTEGYSSAAALRSARAF 122
            +    D    R + L +  G   Y++  ADG   ++ A +G +     +   L SARAF
Sbjct: 61  TALAGSDGKTPRSIRLASVGGLPTYLLDDADGRTRALAARDG-RPLAVDADRVLASARAF 119

Query: 123 SGSEDVLYLGSIDEDRWTHSGSLNPHRPLHMVQVGDVAQTLLYVSSRTGEVVMQASRSQR 182
           SG   +   G  +ED WTH+ +L+PHRPL  VQ  D    LLY+SS+TGEVV  ASR +R
Sbjct: 120 SGEVPMQLQGRFEEDAWTHTRNLDPHRPLWRVQTADEQGRLLYLSSQTGEVVRDASRRER 179

Query: 183 MWNYVGAWLHWLYPLKNQSRDPVWSWTVIALSAGCVLVACSGIVLGLWRWRFARPYKSGS 242
            WN++GAWLHWLYPL+    D  W+  VI LS    LV   GI++GL RWRF +PY+SGS
Sbjct: 180 AWNWLGAWLHWLYPLRGGWFDGQWANLVIGLSLLATLVTVLGILVGLLRWRFRKPYRSGS 239

Query: 243 RSPFAPGWMRWHHLLGLGFAAITLTWIFSGLMSMNPLGIFSPTQSPDLARYDGATVAQHH 302
           RSP+A G+ RWHHL GL F A+ L+WIFSGLMSMNP  +F      DLA Y G +  +  
Sbjct: 240 RSPYAGGFQRWHHLAGLLFGALVLSWIFSGLMSMNPWNLFGRGTPLDLAAYQGGSWDRAL 299

Query: 303 LDRTPTD-ILQALQRDGFQAVELEWKNLGGHGFVLARDAADGTRIVTTGAQGLLVQRQWP 361
                 D +L+ L+  G +  ELEW+ L G  + L R A+  + ++T   +   + R+ P
Sbjct: 300 PAGLEADAVLRRLRAAGLRVRELEWRALDGEPYALGRSASGNSLLLTADGE---ILRELP 356

Query: 362 QAMLQEAAAMLLPAKLMQAELLDGGDAYYYRRAPEAMMGGAERRLPVLRLRFDDAGSTLV 421
              L  AA  LLP   MQAE L+  D YYY R   +MMG  ERRLPV RLRFDD+  T V
Sbjct: 357 ADRLLAAARALLPGVPMQAERLERYDFYYYPREEHSMMGYLERRLPVWRLRFDDSRHTWV 416

Query: 422 YIDPATGQIALTADRAQRVGRWLFSFLHSWDLHFMLAAAGLREAVLILLSLGGLGLSLTG 481
           ++DP +G +    D  +R  RWLFS LHSWD   +L    L +  ++  SLGGL +  +G
Sbjct: 417 HLDPYSGAVVGVLDDGRRGSRWLFSLLHSWDWLPLLTRRPLWDLWMLGFSLGGLVVCASG 476

Query: 482 IVIA 485
             I 
Sbjct: 477 CWIG 480