BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0011.0029.p (457 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value PA2911 [P] COG1629 Outer membrane receptor proteins, mostly Fe t... 297 3e-80 PA0434 [P] COG1629 Outer membrane receptor proteins, mostly Fe t... 171 3e-42 RSc2920 [P] COG1629 Outer membrane receptor proteins, mostly Fe ... 86 2e-16 FN1971 [P] COG1629 Outer membrane receptor proteins, mostly Fe t... 85 3e-16 PA0470 [P] COG1629 Outer membrane receptor proteins, mostly Fe t... 85 5e-16 >PA2911 [P] COG1629 Outer membrane receptor proteins, mostly Fe transport Pae Pseudomonas aeruginosa Length = 718 Score = 297 bits (761), Expect = 3e-80, Method: Compositional matrix adjust. Identities = 167/408 (40%), Positives = 245/408 (60%), Gaps = 18/408 (4%) Query: 29 PYALPL---LCLAAPVQAE--ESANALPAITINA-QSP-----LPLQNQVSVGSNLDLTP 77 P+AL L L L P AE E+A ALP+ ++ Q P + L VS GS L L+ Sbjct: 11 PFALGLSTSLLLVPPALAETEEAALALPSQLVSVRQDPAELDHIDLATPVSAGSRLGLSA 70 Query: 78 LQTPASVSVINRQQLEERGDASITDAITRAPGYSAMGHPGNSGSALSARGFTDATSVMRL 137 L TPAS S I+ +++ R + S+ A+TR+PG S +G PG+ G+ LSARGF+ SVM+L Sbjct: 71 LDTPASTSSISGEEVRRRNNPSVQAAVTRSPGISFIGTPGDGGTGLSARGFSGHASVMQL 130 Query: 138 YDGLRQYGGVG-VSFPFDTWNIDRIEVLSGPASVIYGDGAIGGVVNVIPKKPTRGKIENE 196 +DG R Y G+G V+FP D W ++RI+V+ GPASV+YG+GA G V+NV+PKKP G+I N Sbjct: 131 FDGTRLYTGMGTVNFPSDPWMVERIDVIRGPASVLYGEGATGAVINVVPKKPFAGEIRNH 190 Query: 197 IETTIGTHNTRRLGLGSGGAINEMLSYRVDIAGDRSDGWVDRGNTNNLSLSGALRLDVNR 256 + G+++ R+L L SGG++ + LSYR+++ +S GW+DRG++ NL +S ALR + Sbjct: 191 LRLGYGSYDNRQLALDSGGSLTDSLSYRLNLNQQQSHGWIDRGDSRNLGISAALRWQASD 250 Query: 257 DLFVQLSYAQGHQRPMAYFGTPLINGQQVDALRERNYNVADGTIDYKDRWAQLEAQWTPD 316 DL L++ G Q PM FGTPL+ G+ LRE+NYNV + Y D+W +L + W+ Sbjct: 251 DLAFTLAHDYGDQEPMNDFGTPLVGGKYHKRLREKNYNVRNDVQRYNDQWTRLTSDWSLS 310 Query: 317 ADTTLRTRLYQINSNRYWRNAESYVYNKTTGLVDRGDATEIRHDQSQTGVTTDATFKGHL 376 T +LY I + R+WRNAE+Y ++ + R D I H+Q Q G F+ L Sbjct: 311 DSVTASNQLYYIKARRHWRNAETYEWDVPREELLRRDYLRISHEQEQIGDRQTFAFQHAL 370 Query: 377 AGLKNQVSVGFDINSTSFTHTNNT----YSGSFSSVNPYSFDPGSYAS 420 GL ++ VG + N F +NN+ G + ++P+ PG + S Sbjct: 371 FGLDSRTLVGAEYNRIRFRLSNNSPYTDVGGDY--IDPWHPAPGYFES 416 >PA0434 [P] COG1629 Outer membrane receptor proteins, mostly Fe transport Pae Pseudomonas aeruginosa Length = 730 Score = 171 bits (433), Expect = 3e-42, Method: Compositional matrix adjust. Identities = 134/414 (32%), Positives = 208/414 (50%), Gaps = 22/414 (5%) Query: 22 RRTIAYAPYALPLLCLAAPVQAEESANALPAITINA----QSP--LPLQNQVSVGSNLDL 75 RR +A L L + A + A+E LPA+T++A ++P L L + GS L L Sbjct: 8 RRVLALG-LNLTLAGVPALLWADEEPTELPALTVSAGAAGETPPALDLDDSAGGGSRLGL 66 Query: 76 TPLQTPASVSVINRQQLEERGDASITDAITRAPGYSAMGHPGNSGSALSARGFTDATSVM 135 + +TP SVSV NR E RG S D PG +A PG G ++ RGF+ + V Sbjct: 67 SLRETPGSVSVANRASFERRGLRSTQDIANSLPGVNASAPPG-FGGFVTYRGFS-SNQVN 124 Query: 136 RLYDGL-RQYGGVGVSFPFDTWNIDRIEVLSGPASVIYGDGAIGGVVNVIPKKPTRGKIE 194 +L++G+ QY P D W +DR+E++ GP+S + G GA+GG ++ I K R Sbjct: 125 QLFNGIPVQYSSA--MRPLDDWIVDRVELVGGPSSFLNGAGAVGGSLDYISKLADRYGDF 182 Query: 195 NEIETTIGTHNTRRLGLGSGGAI----NEMLSYRVDIAGDRSDGWVDRGNTNNLSLSGAL 250 E G+++ + G A+ R+D++ +G+VDR + + +++ +L Sbjct: 183 MEGRVRYGSYDDSEVAFGFNQALGIGPEPKHFVRLDVSRSGGNGYVDRNSRESWNVAFSL 242 Query: 251 RLDVNRDLFVQLSYA-QGHQRPMAYFGTPLIN---GQ-QVDALRER-NYNVADGTIDYKD 304 D+ DL L+ Q Q Y+GTP++N G+ ++D R R NYNVADG + + Sbjct: 243 LSDLTPDLSHTLALEYQDEQEDSPYWGTPVLNPYAGELKIDKSRRRENYNVADGRYEQRV 302 Query: 305 RWAQLEAQWTPDADTTLRTRLYQINSNRYWRNAESYVYNKTTGLVDRGDATEIRHDQSQT 364 RW + ++ T R Y ++ R +RN E+Y YN V R +A RHDQ Sbjct: 303 RWLRSILEYRVSDSTRWRNTFYHYDAERDYRNLETYRYNADNSGVVRSNAFLQRHDQQLN 362 Query: 365 GVTTDATFKGHLAGLKNQVSVGFDINSTSFTHTNNTYSGSFSSVNPYSFDPGSY 418 G + L GL + ++GFD + T +T SG F +V+P SF+PG + Sbjct: 363 GNRFELQHSQPLFGLASDWALGFDYSINKQTRFPSTASGPFGTVDPASFEPGHF 416 >RSc2920 [P] COG1629 Outer membrane receptor proteins, mostly Fe transport Rso Ralstonia solanacearum Length = 801 Score = 86.3 bits (212), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 57/161 (35%), Positives = 86/161 (53%), Gaps = 8/161 (4%) Query: 68 SVGSNLDLTPLQTPASVSVINRQQLEERGDASITDAITRAPGYSAMGHPGNSGSALSARG 127 + G+ D + P S+SV+ R + E +G S+ +A+ S G S + RG Sbjct: 142 ATGTKTDAPIEEIPQSISVVTRDRFEAQGAQSVNEALRYTASVSTYGAGTRSDWYTAVRG 201 Query: 128 FTDATSVMRLYDGLRQYGGVGV-SFPFDTWNIDRIEVLSGPASVIYGDGAIGGVVNVIPK 186 F AT + DGL+ + + S+ D W I+ +E+L GPASV+YG G GG VNV+ K Sbjct: 202 FVPATYL----DGLQLPNTINLASWRVDPWQIECVELLRGPASVLYGQGDPGGTVNVVTK 257 Query: 187 KPTRGKIENEIETTIGTHNTRRLGLGSGGAINE--MLSYRV 225 +PT I EIE G+H +++ GGA++ LSYR+ Sbjct: 258 QPTAEPIR-EIEVQYGSHVRKQVAGDFGGALDADGKLSYRL 297 >FN1971 [P] COG1629 Outer membrane receptor proteins, mostly Fe transport Fnu Fusobacterium nucleatum Length = 657 Score = 85.1 bits (209), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 62/186 (33%), Positives = 95/186 (51%), Gaps = 7/186 (3%) Query: 58 QSPLPLQNQVSVGSNLDLTPL-QTPASVSVINRQQLEERGDASITDAITRAPGYSAMGHP 116 +SP+ Q V S+ TP+ +T +++VIN ++++E+G +I DA+ PG Sbjct: 22 ESPVLELKQTVVTSDSFGTPVRETAKNMTVINAKEIKEKGAKTIADALRGVPGVVVRQMD 81 Query: 117 GNSGSA-LSARGFTDATSVMRLYDGLRQYGGVGVSF---PFDTWNIDRIEVLSGPASVIY 172 G S L G T + + L DG+ G G + P D I++IEVL G +V+Y Sbjct: 82 GASPMVDLRGSGATSQFNTVILLDGIPVSGLAGFNLNTVPVD--EIEKIEVLQGAGAVMY 139 Query: 173 GDGAIGGVVNVIPKKPTRGKIENEIETTIGTHNTRRLGLGSGGAINEMLSYRVDIAGDRS 232 GDGAIGGVVN+I K PT+ + +G+ T R + GG I + +G+ S Sbjct: 140 GDGAIGGVVNIITKAPTKKAVYGGAGLEVGSWRTIRENVYLGGKIGDKFLLNASYSGNSS 199 Query: 233 DGWVDR 238 + DR Sbjct: 200 KDYRDR 205 >PA0470 [P] COG1629 Outer membrane receptor proteins, mostly Fe transport Pae Pseudomonas aeruginosa Length = 802 Score = 84.7 bits (208), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 94/379 (24%), Positives = 165/379 (43%), Gaps = 37/379 (9%) Query: 45 ESANALPAITINAQSPLPL-------QNQVSVGSNLDLTPLQTPASVSVINRQQLEERGD 97 E +L A+T++ PL + G+ D L+TP S+SV RQQ+ +R Sbjct: 110 EDTLSLQAMTVSGAEEDPLGPTSGYVAKRSMTGTKTDTPILETPRSISVATRQQMTDRAV 169 Query: 98 ASITDAITRAPGYSAMGHPGNSGSA-LSARGFTDATSVMRLYDGLRQYGGVGVSFPFDTW 156 ++ DA+ PG A +S S L RGF + DGL GV + +TW Sbjct: 170 HNLDDAVRYMPGVVASSFGSDSRSDWLKVRGFKPT----QFLDGLPMAVGVYNNPKLETW 225 Query: 157 NIDRIEVLSGPASVIYGDGAIGGVVNVIPKKPTRGKIENEIETTIGTHNTRRLGLGSGGA 216 N++R+ +L GPAS +YG GG+++++ +P + +E++ +G +N +++ S G Sbjct: 226 NLERVALLRGPASSVYGQTPPGGMLDMVSLRP-QNVASHEVKAEVGNYNHKQVSFDSTGP 284 Query: 217 INE--MLSYRVDIAGDRSDGWVDRGNTNNLSLSGALRLDVNRDLFVQLSYAQGHQRPMAY 274 +++ YRV S+ VD + +++ +L +++ D +L++ R Sbjct: 285 LDDEGRFLYRVSGVVRDSNTQVDHIDDKRYNIAPSLTWNIDDD--TRLTFLGQFNRDDTG 342 Query: 275 FGTPL--INGQQVDA---LRERNYNVADGTIDYKDRWAQLEAQWTPDADTTLRTRLYQIN 329 + + G + DA + N+ D +Y DR W A ++Q Sbjct: 343 ITSQFLPLRGTKYDAPFGKVSHHKNLGDPDWEYYDR----TYYWLGYAFERRINDVWQFR 398 Query: 330 SN-RYWRN---------AESYVYNKTTGLVDRGDATEIRHDQSQTGVTTDATFKGHLAGL 379 N RY RN A Y G + R +T + D SQ V + L Sbjct: 399 QNLRYLRNDLSFQALTPASYYAAASDDGTLQR-TSTSVDEDVSQFVVDNNFQADFDTGAL 457 Query: 380 KNQVSVGFDINSTSFTHTN 398 ++ + +G D N T+ +T+ Sbjct: 458 RHTLLLGLDHNRTTNEYTS 476