BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0011.0012.p (326 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value PA2349 [P] COG1464 ABC-type metal ion transport system, periplas... 225 1e-58 YPO1071 [P] COG1464 ABC-type metal ion transport system, peripla... 158 2e-38 STM0245 [P] COG1464 ABC-type metal ion transport system, peripla... 156 6e-38 ZyaeC [P] COG1464 ABC-type metal ion transport system, periplasm... 155 1e-37 ECs0199 [P] COG1464 ABC-type metal ion transport system, peripla... 155 1e-37 >PA2349 [P] COG1464 ABC-type metal ion transport system, periplasmic component/surface antigen Pae Pseudomonas aeruginosa Length = 264 Score = 225 bits (573), Expect = 1e-58, Method: Compositional matrix adjust. Identities = 114/253 (45%), Positives = 163/253 (64%), Gaps = 6/253 (2%) Query: 74 AGVAHAADK-LRIGVVPGAYGDSIAVAAKEAKSQGIDVQVVEFTDWTTPNVAVDAGDLDL 132 +G A AAD L+IG A+ + VA EA QG+ V++VEF+DW PN+ + GD+D Sbjct: 16 SGPAQAADAPLKIGTT-AAFAPPLEVAVSEAGKQGLKVELVEFSDWNAPNITLAQGDIDA 74 Query: 133 NYFQHQPFLDNAIQKNGYKLASAGTGILANVGLYSLKHKTFAQVPQGGKVGIANDPVNQG 192 NYFQH PFL+NA ++ G++L GI+ NVGLYS ++ + A++P+G V IANDP+N G Sbjct: 75 NYFQHVPFLENANREGGFQLKPFAPGIINNVGLYSKRYASLAELPEGASVAIANDPINGG 134 Query: 193 RGLLLLQSVGLIKLKPNVGYLGSLNDIVENPKKLNFVEVEGPQLVRITPDVDLAQGYPHF 252 RGL LLQ GL+KL+ VGY +L+DIV+NPK + E+E QL R D DLAQGYPH+ Sbjct: 135 RGLQLLQKAGLLKLRDGVGYKATLDDIVDNPKDIRITELEAVQLARALDDFDLAQGYPHY 194 Query: 253 IVAAKAFDPSSGLAYSGIEDARFAIQFVTKASRVN-DPVIQKFIRIYQNSETVKADIHRA 311 + A DP+ L + GI++ + IQFVT+ + D + +F+ IYQ+S V+A + +A Sbjct: 195 LRLAGTIDPTRALLFDGIDNREYVIQFVTRGDYQDRDGRLARFVDIYQHSPVVRAALDKA 254 Query: 312 FNSDKRLYTLAWQ 324 + LY W+ Sbjct: 255 HGT---LYQPGWE 264 >YPO1071 [P] COG1464 ABC-type metal ion transport system, periplasmic component/surface antigen Ype Yersinia pestis Length = 271 Score = 158 bits (400), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 93/237 (39%), Positives = 138/237 (58%), Gaps = 3/237 (1%) Query: 79 AADKLRIGVVPGAYGDSIAVAAKEAKSQ-GIDVQVVEFTDWTTPNVAVDAGDLDLNYFQH 137 A + +++GV+ GA VA K AK + G+DV++V F D+ PN A+ GD+DLN FQH Sbjct: 29 APNHIKVGVIVGAEQQVAEVAQKVAKEKYGLDVELVTFNDYVLPNEALSKGDIDLNAFQH 88 Query: 138 QPFLDNAIQKNGYKLASAGTGILANVGLYSLKHKTFAQVPQGGKVGIANDPVNQGRGLLL 197 +P+LD I+ GYKL S G + + YS K K+ ++ G +V + NDP N GR LLL Sbjct: 89 KPYLDQQIKDRGYKLVSVGNSFVYPIAGYSKKIKSLDELQPGSQVALPNDPTNLGRSLLL 148 Query: 198 LQSVGLIKLKPNVGYLGSLNDIVENPKKLNFVEVEGPQLVRITPDVDLAQGYPHFIVAAK 257 LQSVGLIKLK VG L ++ D+VENPK L VE+E PQL R D +A + A++ Sbjct: 149 LQSVGLIKLKDGVGLLPTVLDVVENPKNLKLVELEAPQLPRSLDDQQIALAIINTTYASQ 208 Query: 258 -AFDPSSGLAYSGIEDARFAIQFVTKASRVNDPVIQKFIRIYQNSETVKADIHRAFN 313 P+ + +++ + V + + ++KF++ YQ+ E A ++AFN Sbjct: 209 IGLTPAKDGLFVEDKESPYVNLIVAREDNKDAENVKKFVQAYQSDEVYDA-ANKAFN 264 >STM0245 [P] COG1464 ABC-type metal ion transport system, periplasmic component/surface antigen Sty Salmonella typhimurium LT2 Length = 271 Score = 156 bits (395), Expect = 6e-38, Method: Compositional matrix adjust. Identities = 92/233 (39%), Positives = 134/233 (57%), Gaps = 3/233 (1%) Query: 83 LRIGVVPGAYGDSIAVAAKEAKSQ-GIDVQVVEFTDWTTPNVAVDAGDLDLNYFQHQPFL 141 +++GV+ GA VA K AK + G+DV++V F D+ PN A+ GD+D N FQH+P+L Sbjct: 33 IKVGVIVGAEQQVAEVAQKVAKEKYGLDVELVTFNDYVLPNEALSKGDIDANAFQHKPYL 92 Query: 142 DNAIQKNGYKLASAGTGILANVGLYSLKHKTFAQVPQGGKVGIANDPVNQGRGLLLLQSV 201 D I+ GYKL S G + + YS K K+ ++ G +V + NDP N GR LLLLQ V Sbjct: 93 DQQIKDRGYKLVSVGKTFVYPIAGYSKKIKSLDELKDGSQVAVPNDPTNLGRSLLLLQKV 152 Query: 202 GLIKLKPNVGYLGSLNDIVENPKKLNFVEVEGPQLVRITPDVDLAQGYPHFIVAAK-AFD 260 GLIKLK VG L + DIVENPK L VE+E PQL R D +A + A++ Sbjct: 153 GLIKLKDGVGLLPTSLDIVENPKNLKIVELEAPQLPRSLDDAQIALAVINTTYASQIGLT 212 Query: 261 PSSGLAYSGIEDARFAIQFVTKASRVNDPVIQKFIRIYQNSETVKADIHRAFN 313 P+ + +D+ + VT+ + ++KF++ YQ+ E +A ++ FN Sbjct: 213 PAKDGIFVEDKDSPYVNLIVTREDNKDAENVKKFVQAYQSDEVYEA-ANKVFN 264 >ZyaeC [P] COG1464 ABC-type metal ion transport system, periplasmic component/surface antigen EcZ Escherichia coli O157:H7 EDL933 Length = 271 Score = 155 bits (392), Expect = 1e-37, Method: Compositional matrix adjust. Identities = 94/261 (36%), Positives = 145/261 (55%), Gaps = 8/261 (3%) Query: 60 FRHLLVVLTVLSAQAGVAHAADK-----LRIGVVPGAYGDSIAVAAKEAKSQ-GIDVQVV 113 F+ V ++ + A V D+ +++GV+ GA VA K AK + G+DV++V Sbjct: 5 FKTFAAVGALIGSLALVGCGQDEKDPNHIKVGVIVGAEQQVAEVAQKVAKDKYGLDVELV 64 Query: 114 EFTDWTTPNVAVDAGDLDLNYFQHQPFLDNAIQKNGYKLASAGTGILANVGLYSLKHKTF 173 F D+ PN A+ GD+D N FQH+P+LD ++ GYKL + G + + YS K K+ Sbjct: 65 TFNDYVLPNEALSKGDIDANAFQHKPYLDQQLKDRGYKLVAVGNTFVYPIAGYSKKIKSL 124 Query: 174 AQVPQGGKVGIANDPVNQGRGLLLLQSVGLIKLKPNVGYLGSLNDIVENPKKLNFVEVEG 233 ++ G +V + NDP N GR LLLLQ VGLIKLK VG L ++ D+VENPK L VE+E Sbjct: 125 DELQDGSQVAVPNDPTNLGRSLLLLQKVGLIKLKDGVGLLPTVLDVVENPKNLKIVELEA 184 Query: 234 PQLVRITPDVDLAQGYPHFIVAAK-AFDPSSGLAYSGIEDARFAIQFVTKASRVNDPVIQ 292 PQL R D +A + A++ P+ + +D+ + VT+ + ++ Sbjct: 185 PQLPRSLDDAQIALAVINTTYASQIGLTPAKNGIFVEDKDSPYVNLIVTREDNKDAENVK 244 Query: 293 KFIRIYQNSETVKADIHRAFN 313 KF++ YQ+ E +A ++ FN Sbjct: 245 KFVQAYQSDEVYEA-ANKVFN 264 >ECs0199 [P] COG1464 ABC-type metal ion transport system, periplasmic component/surface antigen Ecs Escherichia coli O157:H7 Length = 271 Score = 155 bits (392), Expect = 1e-37, Method: Compositional matrix adjust. Identities = 94/261 (36%), Positives = 145/261 (55%), Gaps = 8/261 (3%) Query: 60 FRHLLVVLTVLSAQAGVAHAADK-----LRIGVVPGAYGDSIAVAAKEAKSQ-GIDVQVV 113 F+ V ++ + A V D+ +++GV+ GA VA K AK + G+DV++V Sbjct: 5 FKTFAAVGALIGSLALVGCGQDEKDPNHIKVGVIVGAEQQVAEVAQKVAKDKYGLDVELV 64 Query: 114 EFTDWTTPNVAVDAGDLDLNYFQHQPFLDNAIQKNGYKLASAGTGILANVGLYSLKHKTF 173 F D+ PN A+ GD+D N FQH+P+LD ++ GYKL + G + + YS K K+ Sbjct: 65 TFNDYVLPNEALSKGDIDANAFQHKPYLDQQLKDRGYKLVAVGNTFVYPIAGYSKKIKSL 124 Query: 174 AQVPQGGKVGIANDPVNQGRGLLLLQSVGLIKLKPNVGYLGSLNDIVENPKKLNFVEVEG 233 ++ G +V + NDP N GR LLLLQ VGLIKLK VG L ++ D+VENPK L VE+E Sbjct: 125 DELQDGSQVAVPNDPTNLGRSLLLLQKVGLIKLKDGVGLLPTVLDVVENPKNLKIVELEA 184 Query: 234 PQLVRITPDVDLAQGYPHFIVAAK-AFDPSSGLAYSGIEDARFAIQFVTKASRVNDPVIQ 292 PQL R D +A + A++ P+ + +D+ + VT+ + ++ Sbjct: 185 PQLPRSLDDAQIALAVINTTYASQIGLTPAKNGIFVEDKDSPYVNLIVTREDNKDAENVK 244 Query: 293 KFIRIYQNSETVKADIHRAFN 313 KF++ YQ+ E +A ++ FN Sbjct: 245 KFVQAYQSDEVYEA-ANKVFN 264