BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0011.0008.p         (123 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

YPO3875 [L] COG3328 Transposase and inactivated derivatives Ype ...   137   8e-33
YPO2942 [L] COG3328 Transposase and inactivated derivatives Ype ...   137   8e-33
YPO2862 [L] COG3328 Transposase and inactivated derivatives Ype ...   137   8e-33
YPO2799 [L] COG3328 Transposase and inactivated derivatives Ype ...   137   8e-33
YPO2783 [L] COG3328 Transposase and inactivated derivatives Ype ...   137   8e-33

>YPO3875 [L] COG3328 Transposase and inactivated derivatives Ype Yersinia
           pestis
          Length = 402

 Score =  137 bits (344), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 59/123 (47%), Positives = 90/123 (73%)

Query: 1   LIYQSATAEEAELRLGEFEEKWDAEYLPIGQSWRRNWPRLIPFFDFPPEIRKVIYTTNAI 60
           ++YQ+ T E A + L +F E WD +Y  I +SWR +W  L  FF +PP+IRK IYTTNAI
Sbjct: 279 MVYQAPTEEAALMALDKFAEAWDDKYPQISKSWRTHWENLNTFFGYPPDIRKAIYTTNAI 338

Query: 61  ESVNMSLRKLTKNRGSFPSDEALIKLFFLALRNISKKWTLPIRDWKAALTRFTIQFGERI 120
           ESVN  +R   K R  FP+D+++ K+ +LA+++ SKKW++PI++W+ A++RF I+FG+R+
Sbjct: 339 ESVNSVIRAAIKKRKVFPTDDSVRKVVYLAIKDASKKWSMPIQNWRLAMSRFIIEFGDRL 398

Query: 121 STN 123
           S +
Sbjct: 399 SDH 401


>YPO2942 [L] COG3328 Transposase and inactivated derivatives Ype Yersinia
           pestis
          Length = 402

 Score =  137 bits (344), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 59/123 (47%), Positives = 90/123 (73%)

Query: 1   LIYQSATAEEAELRLGEFEEKWDAEYLPIGQSWRRNWPRLIPFFDFPPEIRKVIYTTNAI 60
           ++YQ+ T E A + L +F E WD +Y  I +SWR +W  L  FF +PP+IRK IYTTNAI
Sbjct: 279 MVYQAPTEEAALMALDKFAEAWDDKYPQISKSWRTHWENLNTFFGYPPDIRKAIYTTNAI 338

Query: 61  ESVNMSLRKLTKNRGSFPSDEALIKLFFLALRNISKKWTLPIRDWKAALTRFTIQFGERI 120
           ESVN  +R   K R  FP+D+++ K+ +LA+++ SKKW++PI++W+ A++RF I+FG+R+
Sbjct: 339 ESVNSVIRAAIKKRKVFPTDDSVRKVVYLAIKDASKKWSMPIQNWRLAMSRFIIEFGDRL 398

Query: 121 STN 123
           S +
Sbjct: 399 SDH 401


>YPO2862 [L] COG3328 Transposase and inactivated derivatives Ype Yersinia
           pestis
          Length = 402

 Score =  137 bits (344), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 59/123 (47%), Positives = 90/123 (73%)

Query: 1   LIYQSATAEEAELRLGEFEEKWDAEYLPIGQSWRRNWPRLIPFFDFPPEIRKVIYTTNAI 60
           ++YQ+ T E A + L +F E WD +Y  I +SWR +W  L  FF +PP+IRK IYTTNAI
Sbjct: 279 MVYQAPTEEAALMALDKFAEAWDDKYPQISKSWRTHWENLNTFFGYPPDIRKAIYTTNAI 338

Query: 61  ESVNMSLRKLTKNRGSFPSDEALIKLFFLALRNISKKWTLPIRDWKAALTRFTIQFGERI 120
           ESVN  +R   K R  FP+D+++ K+ +LA+++ SKKW++PI++W+ A++RF I+FG+R+
Sbjct: 339 ESVNSVIRAAIKKRKVFPTDDSVRKVVYLAIKDASKKWSMPIQNWRLAMSRFIIEFGDRL 398

Query: 121 STN 123
           S +
Sbjct: 399 SDH 401


>YPO2799 [L] COG3328 Transposase and inactivated derivatives Ype Yersinia
           pestis
          Length = 402

 Score =  137 bits (344), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 59/123 (47%), Positives = 90/123 (73%)

Query: 1   LIYQSATAEEAELRLGEFEEKWDAEYLPIGQSWRRNWPRLIPFFDFPPEIRKVIYTTNAI 60
           ++YQ+ T E A + L +F E WD +Y  I +SWR +W  L  FF +PP+IRK IYTTNAI
Sbjct: 279 MVYQAPTEEAALMALDKFAEAWDDKYPQISKSWRTHWENLNTFFGYPPDIRKAIYTTNAI 338

Query: 61  ESVNMSLRKLTKNRGSFPSDEALIKLFFLALRNISKKWTLPIRDWKAALTRFTIQFGERI 120
           ESVN  +R   K R  FP+D+++ K+ +LA+++ SKKW++PI++W+ A++RF I+FG+R+
Sbjct: 339 ESVNSVIRAAIKKRKVFPTDDSVRKVVYLAIKDASKKWSMPIQNWRLAMSRFIIEFGDRL 398

Query: 121 STN 123
           S +
Sbjct: 399 SDH 401


>YPO2783 [L] COG3328 Transposase and inactivated derivatives Ype Yersinia
           pestis
          Length = 402

 Score =  137 bits (344), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 59/123 (47%), Positives = 90/123 (73%)

Query: 1   LIYQSATAEEAELRLGEFEEKWDAEYLPIGQSWRRNWPRLIPFFDFPPEIRKVIYTTNAI 60
           ++YQ+ T E A + L +F E WD +Y  I +SWR +W  L  FF +PP+IRK IYTTNAI
Sbjct: 279 MVYQAPTEEAALMALDKFAEAWDDKYPQISKSWRTHWENLNTFFGYPPDIRKAIYTTNAI 338

Query: 61  ESVNMSLRKLTKNRGSFPSDEALIKLFFLALRNISKKWTLPIRDWKAALTRFTIQFGERI 120
           ESVN  +R   K R  FP+D+++ K+ +LA+++ SKKW++PI++W+ A++RF I+FG+R+
Sbjct: 339 ESVNSVIRAAIKKRKVFPTDDSVRKVVYLAIKDASKKWSMPIQNWRLAMSRFIIEFGDRL 398

Query: 121 STN 123
           S +
Sbjct: 399 SDH 401