BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0011.0002.p (223 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value RSc2855 Non COG 131 1e-30 RSp0955 Non COG 121 1e-27 RSc3091 Non COG 105 1e-22 RSc2933 Non COG 103 3e-22 RSp1399 Non COG 95 9e-20 >RSc2855 Non COG Length = 389 Score = 131 bits (330), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 91/228 (39%), Positives = 128/228 (56%), Gaps = 28/228 (12%) Query: 1 MKKSLLALAVFGAFAGAAQAQTSSVSIYGILDTGVVYTSKAINGTA-----NGTGSKFGL 55 MKKSLLA+AV GAFAGAA AQ SSV++YG++D V Y + N T+ G+GS+ + Sbjct: 1 MKKSLLAMAVLGAFAGAAHAQ-SSVTLYGVVDANVEYVNHEQNVTSAGIAIPGSGSRVAM 59 Query: 56 NSAVIQGSRIGFKGVEDLGGGLSAVFNLETGFKNDTGALDDSKTTNTLFRRKSVVGLSGG 115 + + +R G +GVED+GGGL +F LE+GF DTG L LF R++ VGL G Sbjct: 60 QAGGLSSNRWGLRGVEDIGGGLKGLFVLESGFGMDTGTLQQG---GRLFGRQAFVGLQGN 116 Query: 116 FGTVLLGRQ-TDFADSISYLTSVG---DFGFMTGSVGHNLDRLEGTRSNNSISYTTTSMN 171 +G + LGRQ T D ++ + G + + G +G N R +N I YT Sbjct: 117 WGKITLGRQYTTIFDMMANFSPSGYATQYEPVVGLLGPNF------REDNVIKYT----- 165 Query: 172 GFTGNL----FYGFGEQAGRTSAGQAFGIGGKYDNGPLGVGINYFQSK 215 G G + + FGE+AG +A A+G+G Y GP G+G+ Y + K Sbjct: 166 GLFGPVTVEGHWAFGERAGSQTANSAYGLGANYFAGPFGLGVAYDEVK 213 >RSp0955 Non COG Length = 368 Score = 121 bits (303), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 87/214 (40%), Positives = 115/214 (53%), Gaps = 12/214 (5%) Query: 1 MKKSLLALAVFGAFAGAAQAQTSSVSIYGILDTGVVYTSKAINGTANGTG-SKFGL-NSA 58 MK+SL+ +AV G + AA AQ SSV++YG++D G+ Y N N G SK G+ N Sbjct: 1 MKRSLMTVAVLGTISAAAHAQ-SSVTLYGLIDVGIRY-----NTHQNAAGDSKIGMGNGG 54 Query: 59 VIQGSRIGFKGVEDLGGGLSAVFNLETGFKNDTGALDDSKTTNT--LFRRKSVVGLSGG- 115 ++ GSR G G EDLGGG A F LE+GF TG+ S + LF R + VGLS Sbjct: 55 LLSGSRWGLMGNEDLGGGNKAFFQLESGFTPGTGSTQQSTPSGNARLFGRTAAVGLSSQT 114 Query: 116 FGTVLLGRQTDFADSISYLTSVGDFGFMTGSVGHNLDRLEGT-RSNNSISYTTTSMNGFT 174 +G + LGRQ ++Y + G+VG L G R +N++ YT+ S GFT Sbjct: 115 YGEIALGRQYTLVHEMAYTHDIYALSNYVGTVGFQGAGLTGGGRLDNTVRYTSPSFGGFT 174 Query: 175 GNLFYGFGEQAGRTSAGQAFGIGGKYDNGPLGVG 208 Y FGE AG T + + YDNGPL VG Sbjct: 175 FKGAYTFGETAGDTKHNASPAVAASYDNGPLSVG 208 >RSc3091 Non COG Length = 376 Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 91/235 (38%), Positives = 126/235 (53%), Gaps = 30/235 (12%) Query: 1 MKKSLLALAVFGAFAGAAQAQTSSVSIYGILDTGVVYTSKAINGTANGTGSKFGLNSAVI 60 MKKS + +AV FAG+A AQ SSV++YGI+D + YT+ A N N S +++ + Sbjct: 1 MKKSAILVAVGALFAGSAYAQ-SSVTLYGIVDATIHYTTNA-NQAGN---SLLRMDNGAV 55 Query: 61 QGSRIGFKGVEDLGGGLSAVFNLETGFKNDTGALDDSKTTNTLFRRKSVVGLSG-GFGTV 119 SR G KG EDLGGG A+F LE+GF DTG ++ + LF R+S VGLS +GT+ Sbjct: 56 SNSRWGLKGSEDLGGGNKALFVLESGFDPDTGRVN----SGGLFNRQSFVGLSNKDYGTL 111 Query: 120 LLGRQTDFADSISYLTSVGDFGFMTGSVGHNLDR-------LEGTRSNNSISYTTTSMNG 172 +GRQ +F T G+F + VG N D + G R +N + Y NG Sbjct: 112 TMGRQYNFG-----FTMGGNFDPL--GVG-NYDENSWLYYGVTGLRVSNMLKY-EGKWNG 162 Query: 173 FTGNLFYGFGEQAGRTSAGQAFGIGGKYDNGPLGVGINYFQSKQ----GCRRQFW 223 L YGFGEQAG T+ + G Y+ GP +G Y Q + G +++ W Sbjct: 163 LYVGLGYGFGEQAGSTANNRYMGGAVSYEFGPALIGAFYQQQQDSTAAGNKQKVW 217 >RSc2933 Non COG Length = 379 Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 73/200 (36%), Positives = 102/200 (51%), Gaps = 19/200 (9%) Query: 23 SSVSIYGILDTGVVYTSKAINGTANGTGSKFGLNSAVIQGSRIGFKGVEDLGGGLSAVFN 82 SSV++YG+ D GV + +K G S+ + S + GSR G +GVEDLGGGL +FN Sbjct: 22 SSVTLYGVADVGVEWANKVPGADGQGH-SRVAMQSGNLSGSRWGLRGVEDLGGGLKGIFN 80 Query: 83 LETGFKNDTGALDDSKTTNTLFRRKSVVGLSGGFGTVLLGRQT----DFADSISYLTSVG 138 LE+GF DTG S ++ LF R + VGL G +G + LGRQ DFA + + G Sbjct: 81 LESGFNLDTGT---SAQSSRLFGRNAYVGLQGQWGQLTLGRQQNLLYDFALAYDPMAIAG 137 Query: 139 DFGFMTGSVGHNLDRLEGTRSNNSISYTTTSMNGFTGNLFYGFG----EQAGRTSAGQAF 194 + D R++N+I Y T G + + Y F E AG G+ + Sbjct: 138 RYSITA------QDAFMAGRADNAIKYIGT-FGGLSVSALYAFNRDGQEVAGVNKLGREW 190 Query: 195 GIGGKYDNGPLGVGINYFQS 214 +G Y GP G+G+ Y QS Sbjct: 191 SLGANYAAGPFGLGVVYDQS 210 >RSp1399 Non COG Length = 347 Score = 95.1 bits (235), Expect = 9e-20, Method: Compositional matrix adjust. Identities = 73/194 (37%), Positives = 101/194 (52%), Gaps = 11/194 (5%) Query: 23 SSVSIYGILDTGVVYTSKAINGTANGTGSKFGLNSAVIQGSRIGFKGVEDLGGGLSAVFN 82 SSV++YG++DT V YT+ + ANG+G K + ++ GSR G + EDLGGG A Sbjct: 21 SSVTLYGLIDTSVRYTT---HENANGSG-KLQMAEGLLTGSRWGLRADEDLGGGRKAFAQ 76 Query: 83 LETGFKNDTGALDDSKTTNTLFRRKSVVGLSGGFGTVLLGRQTDFADSISYLTSVGDFGF 142 LE+GF DTG+ S LF R ++VGL G +GT+ LGRQ A + ++S Sbjct: 77 LESGFSPDTGS---SLQGGRLFGRTALVGLKGDWGTLTLGRQYTVAHDV--MSSYEAMAL 131 Query: 143 MTGS-VGHNLDRLEGTRSNNSISYTTTSMNGFTGNLFYGFGEQAGRTSAGQAFGIGGKYD 201 S VG+ G R +N + YT T + + L Y FGE G T AG Y Sbjct: 132 ANVSIVGYQGGNYTGLRQDNLLKYTYT-LGAWQTELAYTFGEVPGATRAGSTAAAALIYA 190 Query: 202 NGPLGVGINYFQSK 215 GPL + + QS+ Sbjct: 191 QGPLMLAGVFQQSR 204