BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0010.0258.p         (98 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

RSc2747 [P] COG0735 Fe2+/Zn2+ uptake regulation proteins Rso Ral...   111   5e-25
NMB0205 [P] COG0735 Fe2+/Zn2+ uptake regulation proteins Nme Nei...    99   2e-21
NMA0064 [P] COG0735 Fe2+/Zn2+ uptake regulation proteins NmA Nei...    99   2e-21
RSp0247 [P] COG0735 Fe2+/Zn2+ uptake regulation proteins Rso Ral...    94   1e-19
STM0693 [P] COG0735 Fe2+/Zn2+ uptake regulation proteins Sty Sal...    89   3e-18

>RSc2747 [P] COG0735 Fe2+/Zn2+ uptake regulation proteins Rso Ralstonia
           solanacearum
          Length = 143

 Score =  111 bits (277), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 48/68 (70%), Positives = 59/68 (86%)

Query: 23  GLLQRNHFETGKAVFELNEGSHHDHLVCLDCGKVEEFFDAEIEKRQLKIAQEHGFEIADH 82
           GLL RN+FE+GKA++ELNEG HHDHLVCLDCG+VEEFFD EIE+RQ  IA+  GF + +H
Sbjct: 65  GLLSRNNFESGKAIYELNEGKHHDHLVCLDCGRVEEFFDGEIEQRQQSIARARGFALQEH 124

Query: 83  ALALYGHC 90
           AL+LYG+C
Sbjct: 125 ALSLYGNC 132


>NMB0205 [P] COG0735 Fe2+/Zn2+ uptake regulation proteins Nme Neisseria
           meningitidis MC58
          Length = 144

 Score = 99.4 bits (246), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 44/72 (61%), Positives = 59/72 (81%)

Query: 23  GLLQRNHFETGKAVFELNEGSHHDHLVCLDCGKVEEFFDAEIEKRQLKIAQEHGFEIADH 82
           G+LQR+HFETGKAV+EL++G HHDH+VC+ CG+V EF + EIE  Q KIA+E+G+ I DH
Sbjct: 68  GILQRHHFETGKAVYELDKGDHHDHIVCVKCGEVTEFHNPEIEALQDKIAEENGYRIVDH 127

Query: 83  ALALYGHCKNCK 94
           AL +YG C +C+
Sbjct: 128 ALYMYGVCSDCQ 139


>NMA0064 [P] COG0735 Fe2+/Zn2+ uptake regulation proteins NmA Neisseria
           meningitidis Z2491
          Length = 144

 Score = 99.4 bits (246), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 44/72 (61%), Positives = 59/72 (81%)

Query: 23  GLLQRNHFETGKAVFELNEGSHHDHLVCLDCGKVEEFFDAEIEKRQLKIAQEHGFEIADH 82
           G+LQR+HFETGKAV+EL++G HHDH+VC+ CG+V EF + EIE  Q KIA+E+G+ I DH
Sbjct: 68  GILQRHHFETGKAVYELDKGDHHDHIVCVKCGEVTEFHNPEIEALQDKIAEENGYRIVDH 127

Query: 83  ALALYGHCKNCK 94
           AL +YG C +C+
Sbjct: 128 ALYMYGVCSDCQ 139


>RSp0247 [P] COG0735 Fe2+/Zn2+ uptake regulation proteins Rso Ralstonia
           solanacearum
          Length = 151

 Score = 93.6 bits (231), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 42/71 (59%), Positives = 53/71 (74%)

Query: 24  LLQRNHFETGKAVFELNEGSHHDHLVCLDCGKVEEFFDAEIEKRQLKIAQEHGFEIADHA 83
           +L R+ FE G AV+E+NEG+HHDHL+CL CG+VEEF D  IE RQ  +A E GF + +HA
Sbjct: 68  VLLRHTFEAGHAVYEINEGAHHDHLICLSCGRVEEFHDDAIESRQESVAAERGFVLREHA 127

Query: 84  LALYGHCKNCK 94
           LALYG C  C+
Sbjct: 128 LALYGVCPACQ 138


>STM0693 [P] COG0735 Fe2+/Zn2+ uptake regulation proteins Sty Salmonella
           typhimurium LT2
          Length = 150

 Score = 88.6 bits (218), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 40/68 (58%), Positives = 52/68 (76%)

Query: 23  GLLQRNHFETGKAVFELNEGSHHDHLVCLDCGKVEEFFDAEIEKRQLKIAQEHGFEIADH 82
           G++ R++FE GK+VFEL +  HHDHL+CLDCGKV EF D  IE RQ +IA +HG  + +H
Sbjct: 66  GIVTRHNFEGGKSVFELTQQHHHDHLICLDCGKVIEFSDDSIEARQREIAAKHGIRLTNH 125

Query: 83  ALALYGHC 90
           +L LYGHC
Sbjct: 126 SLYLYGHC 133