BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0010.0118.p (304 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value RSc1205 [O] COG2518 Protein-L-isoaspartate carboxylmethyltransfe... 285 8e-77 PA3624 [O] COG2518 Protein-L-isoaspartate carboxylmethyltransfer... 186 4e-47 VC0532 [O] COG2518 Protein-L-isoaspartate carboxylmethyltransfer... 174 2e-43 YPO3357 [O] COG2518 Protein-L-isoaspartate carboxylmethyltransfe... 171 2e-42 SMb20088_1 [O] COG2518 Protein-L-isoaspartate carboxylmethyltran... 167 4e-41 >RSc1205 [O] COG2518 Protein-L-isoaspartate carboxylmethyltransferase Rso Ralstonia solanacearum Length = 321 Score = 285 bits (730), Expect = 8e-77, Method: Compositional matrix adjust. Identities = 171/315 (54%), Positives = 208/315 (66%), Gaps = 19/315 (6%) Query: 7 RFPLSLSSVVDKK--KTANAGRDAAGRPQATTQTAAKNAAQSSQRAALKPVQQGLAQXLL 64 RFPL+L +VV++K + R ++G + T A+ A S++RA+ P Q + Sbjct: 9 RFPLTLDAVVERKPAERQREKRISSGVNAVSLPTPARTA--SAERASSTPAPGPGPQRVA 66 Query: 65 SAAPVPRTAVRNVMTVTQTNASHHASPLASEAVRKAMVARVAKQGVADAKVLAALEAVPR 124 + + A A +AS+ R+A+VARV GV DA+VLAA+ VPR Sbjct: 67 GVDAAVGAVAASAVQARTQAAHAAAGGMASDRARQALVARVQAAGVTDARVLAAIGRVPR 126 Query: 125 HMFVEPGLASQAYIDASLPIGHHQTISQPYIVARMIELMRQNRH----------GGRLDR 174 H+FV+ GLASQAY DA+LPIGH QTIS+P +V RMIEL+ + R L R Sbjct: 127 HLFVDAGLASQAYEDAALPIGHQQTISKPSVVGRMIELLLRERPEPSAQAAQVPAQPLSR 186 Query: 175 VLEIGTGCGYQAAVLSRVAGEVYSIERIKPLHELAKTNLRPLRVANIRLHYGDGMLGLPQ 234 VLEIGTGCGYQAAVLS+VAGEVYSIERI+PLHE AK NLRPLRV NIRLHYGDGMLGLP+ Sbjct: 187 VLEIGTGCGYQAAVLSQVAGEVYSIERIRPLHEKAKANLRPLRVPNIRLHYGDGMLGLPK 246 Query: 235 VAPFDGIILAAAGLEVPQALLEQLAIGGRLVAPV-----GERQQVLELIERVGQRDWRRT 289 APFD II+AAAGLEVPQALL+QLAIGGRL+APV G Q L LIER G+ + T Sbjct: 247 AAPFDAIIVAAAGLEVPQALLDQLAIGGRLIAPVATDRAGGPSQQLVLIERRGRFQFHST 306 Query: 290 TLEQCHFVPLRPGTV 304 LE FVPL+ GTV Sbjct: 307 ALEGVFFVPLKSGTV 321 >PA3624 [O] COG2518 Protein-L-isoaspartate carboxylmethyltransferase Pae Pseudomonas aeruginosa Length = 211 Score = 186 bits (473), Expect = 4e-47, Method: Compositional matrix adjust. Identities = 100/215 (46%), Positives = 145/215 (67%), Gaps = 7/215 (3%) Query: 92 LASEAVRKAMVARVAKQGVADAKVLAALEAVPRHMFVEPGLASQAYIDASLPIGHHQTIS 151 + S+ R+ ++ R+ ++G+++A VL + PRH+FV+ L+ +AY D +LPIGH+QTIS Sbjct: 1 MTSQRTRERLIQRLYEEGLSNAHVLEVIRRTPRHLFVDEALSHRAYEDTALPIGHNQTIS 60 Query: 152 QPYIVARMIELMRQNRHGGRLDRVLEIGTGCGYQAAVLSRVAGEVYSIERIKPLHELAKT 211 QP++VARM EL+ G LD+V+EIGTG GYQ AVL+++ V+S+ERI+ L + AK Sbjct: 61 QPFMVARMTELLLA---AGPLDKVMEIGTGSGYQTAVLAQLVERVFSVERIQALQDKAKE 117 Query: 212 NLRPLRVANIRLHYGDGMLGLPQVAPFDGIILAAAGLEVPQALLEQLAIGGRLVAPV--G 269 L L + N+ +GDG G +AP++GII+ AA EVPQ+LL+QLA GGRLV PV G Sbjct: 118 RLAELNLRNVVFRWGDGWEGWSALAPYNGIIVTAAATEVPQSLLDQLAPGGRLVIPVGGG 177 Query: 270 ERQQVLELIERVGQRDWRRTTLEQCHFVPLRPGTV 304 E QQ++ LI R + + R L+ FVPL G + Sbjct: 178 EVQQLM-LIVRT-EDGFSRQVLDSVRFVPLLNGPI 210 >VC0532 [O] COG2518 Protein-L-isoaspartate carboxylmethyltransferase Vch Vibrio cholerae Length = 208 Score = 174 bits (442), Expect = 2e-43, Method: Compositional matrix adjust. Identities = 94/204 (46%), Positives = 129/204 (63%), Gaps = 5/204 (2%) Query: 101 MVARVAKQGVADAKVLAALEAVPRHMFVEPGLASQAYIDASLPIGHHQTISQPYIVARMI 160 ++ + +QG+ +VLAA+ A+PR FV P + QAY + +LPIG QTISQPYIVA+M Sbjct: 9 LIQFLTEQGITSPQVLAAIHALPREFFVAPAMMHQAYDNNALPIGQGQTISQPYIVAKMT 68 Query: 161 ELMRQNRHGGRLDRVLEIGTGCGYQAAVLSRVAGEVYSIERIKPLHELAKTNLRPLRVAN 220 EL+ +VLEIGTG GYQ AVL+++ V+++ERIK L AK L+ L + N Sbjct: 69 ELLALTPE----TKVLEIGTGSGYQTAVLAKLVNHVFTVERIKTLQWDAKRRLKQLDIYN 124 Query: 221 IRLHYGDGMLGLPQVAPFDGIILAAAGLEVPQALLEQLAIGGRLVAPVGERQQVLELIER 280 + +GDG G P PFD I++ AA +VPQ+LL+QLA GGR+V PVGE +Q L I R Sbjct: 125 VSTKHGDGWQGWPARGPFDAILVTAAAAKVPQSLLDQLAEGGRMVIPVGEDEQYLYKIVR 184 Query: 281 VGQRDWRRTTLEQCHFVPLRPGTV 304 G + + +E FVPL G + Sbjct: 185 QGGQ-FISERVEAVRFVPLVAGDL 207 >YPO3357 [O] COG2518 Protein-L-isoaspartate carboxylmethyltransferase Ype Yersinia pestis Length = 208 Score = 171 bits (433), Expect = 2e-42, Method: Compositional matrix adjust. Identities = 96/206 (46%), Positives = 131/206 (63%), Gaps = 5/206 (2%) Query: 99 KAMVARVAKQGVADAKVLAALEAVPRHMFVEPGLASQAYIDASLPIGHHQTISQPYIVAR 158 + ++ ++ +QG+ D ++L A+EAVPR FV+ LA +AY + +LPIG QTISQPY+VAR Sbjct: 7 QTLLMQLRQQGIHDERLLQAIEAVPRERFVDEALAHKAYENTALPIGAGQTISQPYMVAR 66 Query: 159 MIELMRQNRHGGRLDRVLEIGTGCGYQAAVLSRVAGEVYSIERIKPLHELAKTNLRPLRV 218 M EL++ RVLEIGTG GYQ A+L+ + V S+ERIK L AK L+ L + Sbjct: 67 MTELLQLTP----TSRVLEIGTGSGYQTAILAHLVDHVCSVERIKGLQWQAKRRLKQLDL 122 Query: 219 ANIRLHYGDGMLGLPQVAPFDGIILAAAGLEVPQALLEQLAIGGRLVAPVGERQQVLELI 278 N+ +GDG LG PFD II+ AA E+P ALLEQL GG LV PVGE+ Q L+ + Sbjct: 123 HNVSTRHGDGWLGWQSRGPFDAIIVTAAPPEIPDALLEQLDEGGILVLPVGEQFQTLKYV 182 Query: 279 ERVGQRDWRRTTLEQCHFVPLRPGTV 304 +R ++ T+E FVPL G + Sbjct: 183 QR-RNNEYHIETVEAVRFVPLVKGEL 207 >SMb20088_1 [O] COG2518 Protein-L-isoaspartate carboxylmethyltransferase Sme Sinorhizobium meliloti Length = 213 Score = 167 bits (422), Expect = 4e-41, Method: Compositional matrix adjust. Identities = 98/208 (47%), Positives = 127/208 (61%), Gaps = 7/208 (3%) Query: 94 SEAVRKAMVARVAKQGVADAKVLAALEAVPRHMFVEPGLASQAYIDASLPIGHHQTISQP 153 S A + + + ++++G+ D V+ A+ VPR FV+PG AY D++L I H QTISQP Sbjct: 5 SRARERMITSHLSRRGIRDRHVVEAMGVVPREAFVDPGFEEFAYEDSALSISHGQTISQP 64 Query: 154 YIVARMIELMRQNRHGGRLDRVLEIGTGCGYQAAVLSRVAGEVYSIERIKPLHELAKTNL 213 YIVA MIE R G D VLEIGTG GY AAVLSR+A VY+IER L E+A+ Sbjct: 65 YIVALMIE--RAEVQPG--DTVLEIGTGSGYAAAVLSRIAAYVYTIERHAGLAEVAERRF 120 Query: 214 RPLRVANIRLHYGDGMLGLPQVAPFDGIILAAAGLEVPQALLEQLAIGGRLVAPVG--ER 271 LR NI + GDG G P+ PFD I++AA G E+P AL EQL +GG LV PVG E Sbjct: 121 AELRYGNIDVRVGDGTAGWPEAGPFDAILVAAGGPEIPHALKEQLDLGGHLVIPVGPPEE 180 Query: 272 QQVLELIERVGQRDWRRTTLEQCHFVPL 299 Q++++ + RV + L FVPL Sbjct: 181 QRLMK-VTRVNATTFEEQDLGGVRFVPL 207