BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0010.0100.p         (85 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

RSc1225 [E] COG3705 ATP phosphoribosyltransferase involved in hi...   122   1e-28
PA4939 [E] COG3705 ATP phosphoribosyltransferase involved in his...    92   4e-19
NMB0814 [E] COG3705 ATP phosphoribosyltransferase involved in hi...    74   9e-14
NMA1023 [E] COG3705 ATP phosphoribosyltransferase involved in hi...    74   1e-13

>RSc1225 [E] COG3705 ATP phosphoribosyltransferase involved in histidine
          biosynthesis Rso Ralstonia solanacearum
          Length = 386

 Score =  122 bits (307), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 56/68 (82%), Positives = 63/68 (92%)

Query: 1  MPNWLLPENIADVLPSEARKIEELRRRLLDNFRLYGYEMVMPPLLEYLESLLTGAGQDTD 60
          MPNWLLPE+IADVLPSEARKIEELRRR+LD FR YGYE+VMPP+LEY+ESLL+G G D D
Sbjct: 1  MPNWLLPESIADVLPSEARKIEELRRRMLDLFRTYGYELVMPPMLEYIESLLSGTGHDLD 60

Query: 61 LRTFKLVD 68
          L+TFKLVD
Sbjct: 61 LKTFKLVD 68


>PA4939 [E] COG3705 ATP phosphoribosyltransferase involved in histidine
          biosynthesis Pae Pseudomonas aeruginosa
          Length = 394

 Score = 91.7 bits (226), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 43/67 (64%), Positives = 52/67 (77%)

Query: 3  NWLLPENIADVLPSEARKIEELRRRLLDNFRLYGYEMVMPPLLEYLESLLTGAGQDTDLR 62
           WLLP+ I +VLP EA +IE  RR++LD F  +GYE V+ P +EYLESLLTGAGQD DLR
Sbjct: 6  RWLLPDGIEEVLPPEAARIEAARRQVLDLFHRWGYEFVVTPHIEYLESLLTGAGQDLDLR 65

Query: 63 TFKLVDP 69
          TFK+ DP
Sbjct: 66 TFKVTDP 72


>NMB0814 [E] COG3705 ATP phosphoribosyltransferase involved in histidine
          biosynthesis Nme Neisseria meningitidis MC58
          Length = 383

 Score = 73.6 bits (179), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 35/68 (51%), Positives = 46/68 (67%)

Query: 1  MPNWLLPENIADVLPSEARKIEELRRRLLDNFRLYGYEMVMPPLLEYLESLLTGAGQDTD 60
          M  W LPE+IADVLP+ AR++E  R +LL  FR++GYE+V PPL+EY  SLLT       
Sbjct: 1  MQTWQLPEHIADVLPTNARQLESAREQLLALFRVHGYELVQPPLMEYAHSLLTHIDAGLS 60

Query: 61 LRTFKLVD 68
          L+T  + D
Sbjct: 61 LKTILVTD 68


>NMA1023 [E] COG3705 ATP phosphoribosyltransferase involved in histidine
          biosynthesis NmA Neisseria meningitidis Z2491
          Length = 383

 Score = 73.6 bits (179), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 35/68 (51%), Positives = 46/68 (67%)

Query: 1  MPNWLLPENIADVLPSEARKIEELRRRLLDNFRLYGYEMVMPPLLEYLESLLTGAGQDTD 60
          M  W LPE+IADVLP+ AR++E  R +LL  FR++GYE+V PPL+EY  SLLT       
Sbjct: 1  MQTWQLPEHIADVLPTNARQLESAREQLLALFRVHGYELVQPPLMEYAHSLLTHIDAGLS 60

Query: 61 LRTFKLVD 68
          L+T  + D
Sbjct: 61 LKTILVTD 68