BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0010.0098.p         (112 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

RSc1225 [E] COG3705 ATP phosphoribosyltransferase involved in hi...   144   4e-35
PA4939 [E] COG3705 ATP phosphoribosyltransferase involved in his...    88   5e-18
NMA1023 [E] COG3705 ATP phosphoribosyltransferase involved in hi...    67   1e-11
NMB0814 [E] COG3705 ATP phosphoribosyltransferase involved in hi...    66   1e-11

>RSc1225 [E] COG3705 ATP phosphoribosyltransferase involved in histidine
           biosynthesis Rso Ralstonia solanacearum
          Length = 386

 Score =  144 bits (364), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 73/109 (66%), Positives = 80/109 (73%)

Query: 1   MFSAYVPGLPNAVVRGGRYDHVGEAFGRARPATGFSLDLRELARLMPGAERKRAILAPWG 60
           MF+AYV G+PNAV RGGRYD VGEAFGRARPATGFSLDLRE+A + P   R  AI APW 
Sbjct: 272 MFAAYVAGVPNAVARGGRYDKVGEAFGRARPATGFSLDLREVAGISPVQARAAAIHAPWS 331

Query: 61  RDAGLREKIAQLRQAGEIVIQSLPGHENDQDEFDCDRALDFSNGNWIIK 109
            DA LRE IA LR  GEIVIQSLPGH  D +EF  DR L    G W++K
Sbjct: 332 GDAKLREAIAGLRATGEIVIQSLPGHPEDLEEFAYDRQLAEEGGRWVVK 380


>PA4939 [E] COG3705 ATP phosphoribosyltransferase involved in histidine
           biosynthesis Pae Pseudomonas aeruginosa
          Length = 394

 Score = 88.2 bits (217), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 49/114 (42%), Positives = 70/114 (61%), Gaps = 4/114 (3%)

Query: 1   MFSAYVPGLPNAVVRGGRYDHVGEAFGRARPATGFSLDLRELARLMPGAERKRAILAPW- 59
           +F+A+VPG+  ++ +GGRYD +G  FGRARPATGFS DL+ L  L   A   +A+   W 
Sbjct: 280 VFAAFVPGVGQSIAQGGRYDDIGADFGRARPATGFSTDLKSLVTLGQ-ARLDQAVSGIWA 338

Query: 60  -GRDAGLREKIAQLRQAGEIVIQSLPGHE-NDQDEFDCDRALDFSNGNWIIKNL 111
               AGL + + +LR+ G+ V+Q+LPG +     E  CDR L   +GNW +  L
Sbjct: 339 PAEGAGLWQAVQRLRRDGQRVVQALPGQDAASAREAGCDRQLALRDGNWQVAPL 392


>NMA1023 [E] COG3705 ATP phosphoribosyltransferase involved in histidine
           biosynthesis NmA Neisseria meningitidis Z2491
          Length = 383

 Score = 66.6 bits (161), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 35/80 (43%), Positives = 47/80 (58%)

Query: 1   MFSAYVPGLPNAVVRGGRYDHVGEAFGRARPATGFSLDLRELARLMPGAERKRAILAPWG 60
           +++AY     +AV RGGRYD +G  FGRARPATGFS DLR     +P  ER+ A+L    
Sbjct: 275 LYAAYAADFHDAVARGGRYDGLGGYFGRARPATGFSFDLRSFIGRLPAIERQPAVLVDAE 334

Query: 61  RDAGLREKIAQLRQAGEIVI 80
                 E +  LR+ G+ V+
Sbjct: 335 DAEAAHEAVEALREQGQCVV 354


>NMB0814 [E] COG3705 ATP phosphoribosyltransferase involved in histidine
           biosynthesis Nme Neisseria meningitidis MC58
          Length = 383

 Score = 66.2 bits (160), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 35/80 (43%), Positives = 47/80 (58%)

Query: 1   MFSAYVPGLPNAVVRGGRYDHVGEAFGRARPATGFSLDLRELARLMPGAERKRAILAPWG 60
           +++AY     +AV RGGRYD +G  FGRARPATGFS DLR     +P  ER+ A+L    
Sbjct: 275 LYAAYAADFHDAVARGGRYDGLGGYFGRARPATGFSFDLRSFIGRLPAIERQPAVLVDAE 334

Query: 61  RDAGLREKIAQLRQAGEIVI 80
                 E +  LR+ G+ V+
Sbjct: 335 DAEAAHEAVEALREQGQCVV 354