BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0010.0058.p         (90 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

STM0157 Non COG                                                        59   3e-09

>STM0157 Non COG
          Length = 540

 Score = 58.5 bits (140), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 31/45 (68%), Positives = 36/45 (80%), Gaps = 4/45 (8%)

Query: 32 PAPV----YTQQQLDQMLAPVALYPDSLLAQVLMASTYPLEVVQA 72
          PAPV    +T  Q+DQ +APVALYPD+LL+QVLMASTYP  VVQA
Sbjct: 51 PAPVAKTTFTTAQIDQWVAPVALYPDALLSQVLMASTYPANVVQA 95