BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0010.0026.p (305 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value PA3213 [Q] COG1463 ABC-type transport system involved in resista... 354 1e-97 XF1301 [Q] COG1463 ABC-type transport system involved in resista... 210 3e-54 CC2320 [Q] COG1463 ABC-type transport system involved in resista... 137 3e-32 BMEI0963 [Q] COG1463 ABC-type transport system involved in resis... 123 5e-28 Cj1648 [Q] COG1463 ABC-type transport system involved in resista... 118 2e-26 >PA3213 [Q] COG1463 ABC-type transport system involved in resistance to organic solvents, periplasmic component Pae Pseudomonas aeruginosa Length = 312 Score = 354 bits (909), Expect = 1e-97, Method: Compositional matrix adjust. Identities = 175/312 (56%), Positives = 230/312 (73%), Gaps = 7/312 (2%) Query: 1 METRAHHVLIGLFTILVALAALVFCLWLTKVGQDRDVDYYTVIFNEAVSGLSRGSPVQYS 60 METRAHHVLIGLF+++V AAL+F LWL K G + +YY ++FNEAVSGLS+GS VQYS Sbjct: 1 METRAHHVLIGLFSVIVIGAALLFGLWLAKSGSEGKFNYYDIVFNEAVSGLSQGSSVQYS 60 Query: 61 GIKVGDVVGLSLDPADPRKVRARIRVTGKAPIKEDTGAKLALAGITGTALIQLTNGSPES 120 GIKVGDV L LDP DPRKV ARIRV APIK+DT AKLAL GITGT++IQL++G+P S Sbjct: 61 GIKVGDVAFLRLDPKDPRKVWARIRVVASAPIKQDTTAKLALTGITGTSIIQLSSGTPAS 120 Query: 121 PRLESKDGNDPIIIASPSPLSALLSNGEDLLSNVNEVLLNAKQFLAPENARRLNQTLAHL 180 P LE KDG P+I+A+PSPL+ LLSNGEDL+ N+N+++ L+ EN R+++TL HL Sbjct: 121 PMLEGKDGKIPVIVATPSPLTQLLSNGEDLMGNINQLIARFSNLLSEENTARISRTLDHL 180 Query: 181 EQLTDTLANQRGNVGTAMQELAAAARQANLA-------MQSANQLLATRGNDAMGNLQQA 233 +Q T L+ +R NV MQ+LA A+RQAN A M+SAN LL +G + N + Sbjct: 181 DQATGALSAERENVSAVMQQLAQASRQANAALAQASELMRSANGLLNEQGKGMLENANKT 240 Query: 234 MRSLAASSQQIEKLIQQNQAALNNGAQGVAEIGPAITELRSTLASVRAISRKLESNPGAY 293 M SL +S +++LI +N+ +L+ G QG+AE+GPA++ELR TLA++R ISR+LE NP Y Sbjct: 241 MASLERTSATLDQLISENRHSLDGGIQGLAELGPAVSELRDTLAALRGISRRLEENPANY 300 Query: 294 LLGQDNLQEFQP 305 LLG++ +EF P Sbjct: 301 LLGREKTKEFTP 312 >XF1301 [Q] COG1463 ABC-type transport system involved in resistance to organic solvents, periplasmic component Xfa Xylella fastidiosa 9a5c Length = 308 Score = 210 bits (535), Expect = 3e-54, Method: Compositional matrix adjust. Identities = 119/314 (37%), Positives = 185/314 (58%), Gaps = 16/314 (5%) Query: 1 METRAHHVLIGLFTILVALAALVFCLWLTKVGQDRDVDYYTVIFNEAVSGLSRGSPVQYS 60 MET+A++VLIG FTIL LA L+F LW K DR Y V+F EAV+GLS GSPVQY+ Sbjct: 1 METKANYVLIGSFTILTGLALLIFGLWAAKYSSDRTWQNYRVVFREAVTGLSVGSPVQYN 60 Query: 61 GIKVGDVVGLSLDPADPRKVRARIRVTGKAPIKEDTGAKLALAGITGTALIQLTNGSPES 120 GI +G + L+L P DPR+V A IRV P+K+DT AKLA+ +TG ++IQL+ G+PES Sbjct: 61 GIAIGSITQLTLAPNDPRQVIAHIRVNSTTPVKKDTRAKLAITSLTGPSIIQLSGGTPES 120 Query: 121 PRLESKDGND-PIIIASPSPLSALLSNGEDLLSNVNEVLLNAKQFLAPENARRLNQTLAH 179 P L S +D PII +PS L + D++ + +V L+ +N ++ L + Sbjct: 121 PSLTSIYKDDAPIIQTTPSALQNITDTANDIVERLYDV-------LSDKNVAAISTILQN 173 Query: 180 LEQLTDTLANQRGNVGTAMQELAAAARQANLAMQSANQLLATRGNDAMGNLQQAMRSLAA 239 +++++ +++ + + A RQ N A+ + N + N+ + L + L A Sbjct: 174 MQKISGQVSDSDTGLKALLTSAHDATRQLNAALATTNGTVQQLDNNLVKQLPVILNKLEA 233 Query: 240 SSQQIE-------KLIQQNQAALNNGA-QGVAEIGPAITELRSTLASVRAISRKLESNPG 291 + +I+ ++ NQAA+N+ A +G+++ P ++ELR+ + +R IS KLE NP Sbjct: 234 TLTKIDATASNANSILDNNQAAINSFASEGLSQFAPTMSELRNLIRDLRQISNKLEDNPK 293 Query: 292 AYLLGQDNLQEFQP 305 YLLG++ +EF P Sbjct: 294 RYLLGRNAPKEFDP 307 >CC2320 [Q] COG1463 ABC-type transport system involved in resistance to organic solvents, periplasmic component Ccr Caulobacter vibrioides Length = 312 Score = 137 bits (344), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 89/296 (30%), Positives = 152/296 (51%), Gaps = 6/296 (2%) Query: 1 METRAHHVLIGLFTILVALAALVFCLWLTKVGQDRDVDYYTVIFNEAVSGLSRGSPVQYS 60 ME A++ L+G ++ + + ++F +WL K+ +RD D Y ++F V GLS+G V ++ Sbjct: 1 MERNANYALVGAISLALFMGLVIFAVWLAKLSFNRDYDVYDILFVGPVRGLSQGGEVHFN 60 Query: 61 GIKVGDVVGLSLDPADPRKVRARIRVTGKAPIKEDTGAKLALAGITGTALIQLTNGSPES 120 GIKVG+V + LD D +V AR+RVT PIK D+ A L GITG +Q+T G+P Sbjct: 61 GIKVGEVTRIELDKTDTNRVIARVRVTSDVPIKVDSYATLEPQGITGVNYVQITAGAPNK 120 Query: 121 PRLES--KDGNDPIIIASPSPLSALLSNGEDLLSNVNEVLLNAKQFLAPENARRLNQTLA 178 L+ K G P+I S LS LL G +L+ E L + L+ N + TL Sbjct: 121 ELLKDTVKTGKVPVIRTQRSALSDLLEGGGTVLTRTIEALDRVNRVLSDRNIKSFGATLT 180 Query: 179 HLEQLTDTLANQR---GNVGTAMQELAAAARQANLAMQSANQLLATRGNDAMGNLQQAMR 235 +++ +T + +++ + A+Q + A+ SAN L+ + L A Sbjct: 181 NVQAVTQEMRDRKEILADAQKALQSIDQTAQSITELSNSANTLVDGDAKRTLKELGDAAA 240 Query: 236 SLAASSQQIEKLIQQNQAALNNGA-QGVAEIGPAITELRSTLASVRAISRKLESNP 290 L A+++ ++ + + ++ A G+ ++ AI L+S S+ + ++E NP Sbjct: 241 ELRATAKDARGMVTKLEGPASDFATTGLPQLSSAIVTLQSAAESLDRLVGEVEQNP 296 >BMEI0963 [Q] COG1463 ABC-type transport system involved in resistance to organic solvents, periplasmic component Bme Brucella melitensis Length = 331 Score = 123 bits (308), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 94/319 (29%), Positives = 150/319 (47%), Gaps = 25/319 (7%) Query: 1 METRAHHVLIGLFTILVALAALVFCLWLTKVGQDRDVDYYTVIFNEAVSGLSRGSPVQYS 60 MET+A++VL+G+FT+LV+L A F W+ + G+ RD V +V+GL GS V ++ Sbjct: 1 METKANYVLVGVFTLLVSLLAFGFVYWIARYGEARDSLPLDVRIQGSVTGLGIGSQVLFN 60 Query: 61 GIKVGDVVGLSLDPADPRKVRARIRVTGKAPIKEDTGAKLALAGITGTALIQLTNGSPES 120 GIKVGDV L LD ++P V + RV PI T A L G+TG A I+L G + Sbjct: 61 GIKVGDVRRLHLDDSNPGMVIVQTRVNATTPITRSTTATLGFQGLTGQAYIELKGGRLDE 120 Query: 121 PRL---ESKDGNDPIIIASPSPLSALLSNGEDLLSNVNEVLLNAKQFLAP---------E 168 P L +K+ I A PS ++ LL+ +D+ + N VL + F+ Sbjct: 121 PNLLTEAAKEDTVARIDADPSAVNNLLATAQDIAARANNVLSQLEGFVKDARGPLTDTIN 180 Query: 169 NARRLNQTLAHLEQLTDTLANQRGNV-------GTAMQELAAAARQANLAMQSANQLLAT 221 N + Q LA + L GN+ M L AA+ + + +++L+ Sbjct: 181 NTKTFTQALADNADIIQELGQNAGNIRQIVVDAKDMMARLNAASVKVESILNKTDKMLS- 239 Query: 222 RGNDAMGNLQQAMRSLAASSQQIEKLIQQNQAALNN----GAQGVAEIGPAITELRSTLA 277 +D G + QA+ +L + + L + NN QG+ E+ + + R + Sbjct: 240 -ADDKNGLVAQAITTLQSIRETSNNLDARLAPIANNLDRFSGQGLREMQGVVIDSRRAIQ 298 Query: 278 SVRAISRKLESNPGAYLLG 296 + + +LE NP + G Sbjct: 299 RIEQVITELERNPQRLIFG 317 >Cj1648 [Q] COG1463 ABC-type transport system involved in resistance to organic solvents, periplasmic component Cje Campylobacter jejuni Length = 296 Score = 118 bits (295), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 77/220 (35%), Positives = 112/220 (50%), Gaps = 4/220 (1%) Query: 1 METRAHHVLIGLFTILVALAALVFCLWLTKVGQDRDVDYYTVIFNEAVSGLSRGSPVQYS 60 ME RA++ +GLF V A+L F LWL ++ YY + E+V+GL +PV+ Sbjct: 1 MENRANYFFVGLFVFGVFFASLGFILWLGGYSKEESFKYYEIHTQESVAGLGIKAPVRLL 60 Query: 61 GIKVGDVVGLSLDPADPRKVRARIRVTGKAPIKEDTGAKLALAGITGTALIQLTNGSPES 120 G++VG V +S+ D V RI+V PIKEDT A L L GITG IQL GS S Sbjct: 61 GVEVGSVEEISIYNQDELGVNIRIKVKNNTPIKEDTFATLQLQGITGLKFIQLQGGSKNS 120 Query: 121 PRLESKDGNDPIIIASPSPLSALLSNGEDLLSNVNEVLLNAKQFLAPENARRLNQTLAHL 180 L S G P+I S L+ + E + S V +K+ L+ +N + L L +L Sbjct: 121 KDLVSMQGKLPVIPFKESFLATIDRQSEHIFSLVKTADDKSKELLSEKNLKNLEILLQNL 180 Query: 181 EQLTDTL-ANQRG---NVGTAMQELAAAARQANLAMQSAN 216 +L+ L AN + N+ A ++ A +L+ Q+ N Sbjct: 181 AELSANLNANSKNLSLNLSNASLKIGKMADNISLSAQNFN 220