BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0010.0025.p (276 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value PA3212 [Q] COG1127 ABC-type transport system involved in resista... 356 4e-98 XF1302 [Q] COG1127 ABC-type transport system involved in resista... 296 4e-80 AGc3034 [Q] COG1127 ABC-type transport system involved in resist... 268 1e-71 CC2319 [Q] COG1127 ABC-type transport system involved in resista... 265 6e-71 SMc00175 [Q] COG1127 ABC-type transport system involved in resis... 258 7e-69 >PA3212 [Q] COG1127 ABC-type transport system involved in resistance to organic solvents, ATPase component Pae Pseudomonas aeruginosa Length = 264 Score = 356 bits (913), Expect = 4e-98, Method: Compositional matrix adjust. Identities = 194/252 (76%), Positives = 211/252 (83%) Query: 12 EAIIDVRGLRNQFGPQVVHDQLDLQVRRGEILGVVGGSGTGKSVLLRSIVGLQRPAAGQV 71 +AII VR L N+FG Q VH+ LDL VRRGEILGVVGGSGTGKSVLLRSIVGL+RP +G V Sbjct: 7 QAIIQVRDLCNRFGAQAVHEHLDLDVRRGEILGVVGGSGTGKSVLLRSIVGLRRPTSGSV 66 Query: 72 KVFGQDLSALSTEARSQYERRFGVLFQQGALFSSLTVLENIALPLTEYGGLDADEARGVS 131 +VFG+DL L E RS ERRFGVLFQQGALFSSLTV+EN+ALPL E GL +A ++ Sbjct: 67 RVFGEDLLQLPEERRSLVERRFGVLFQQGALFSSLTVVENVALPLIENAGLPRADAEHLA 126 Query: 132 AMKLALAGLPIAAGDKTPAELSGGMIKRAALARALALDPDILFLDEPTAGLDPISAAAFD 191 +KLALAGLP AGDK PA LSGGMIKRAALARALALDPDILFLDEPTAGLDPI AAAFD Sbjct: 127 QVKLALAGLPANAGDKYPASLSGGMIKRAALARALALDPDILFLDEPTAGLDPIGAAAFD 186 Query: 192 RLILTLRDALGLTVFLVTHDLDTLYAICDRVAVLSAKRVLVADRIEAVAAFDDPWIRQYF 251 LI TLRDALGLTVFLVTHDLDTLY ICDRVAVLS K+VLV D +E VAA DD W+R+YF Sbjct: 187 NLIRTLRDALGLTVFLVTHDLDTLYTICDRVAVLSQKKVLVVDTLERVAATDDAWVREYF 246 Query: 252 QGPRGRAASQAA 263 GPRGRAA QAA Sbjct: 247 HGPRGRAAHQAA 258 >XF1302 [Q] COG1127 ABC-type transport system involved in resistance to organic solvents, ATPase component Xfa Xylella fastidiosa 9a5c Length = 286 Score = 296 bits (757), Expect = 4e-80, Method: Compositional matrix adjust. Identities = 151/259 (58%), Positives = 189/259 (72%), Gaps = 1/259 (0%) Query: 5 AHDDQAVEAIIDVRGLRNQFGPQVVHDQLDLQVRRGEILGVVGGSGTGKSVLLRSIVGLQ 64 A + + I VRGL N+FG Q VHD LD+ V RGEILGVVGGSGTGKSVL+R+I+GL+ Sbjct: 20 AGEHKETNLAIRVRGLINRFGAQTVHDGLDIDVHRGEILGVVGGSGTGKSVLMRTILGLR 79 Query: 65 RPAAGQVKVFGQDLSALSTEARSQYERRFGVLFQQGALFSSLTVLENIALPLTEYGG-LD 123 P AG ++V G + + ++E R R GVLFQ GALFSS+TV EN+ +P+ E+ G Sbjct: 80 TPNAGSIEVLGVNPHSQTSEDRRIIARNTGVLFQDGALFSSMTVGENVQVPMKEHHGEFP 139 Query: 124 ADEARGVSAMKLALAGLPIAAGDKTPAELSGGMIKRAALARALALDPDILFLDEPTAGLD 183 ++ +K+ LAGLP A DK P++LSGGM KRA LARALALDP +LFLDEPTAGLD Sbjct: 140 KRLYYELALLKIKLAGLPANALDKFPSQLSGGMRKRAGLARALALDPPLLFLDEPTAGLD 199 Query: 184 PISAAAFDRLILTLRDALGLTVFLVTHDLDTLYAICDRVAVLSAKRVLVADRIEAVAAFD 243 PI AA+FD+LI TL+ ALGLTVFL+THDLDTLY IC+RVAVL+ ++V+ + + D Sbjct: 200 PIGAASFDQLIKTLQKALGLTVFLITHDLDTLYTICNRVAVLAERKVIANAPLAEIETID 259 Query: 244 DPWIRQYFQGPRGRAASQA 262 PWIR+YF GPRGRAA A Sbjct: 260 HPWIREYFHGPRGRAARTA 278 >AGc3034 [Q] COG1127 ABC-type transport system involved in resistance to organic solvents, ATPase component Atu Agrobacterium tumefaciens strain C58 (Cereon) Length = 295 Score = 268 bits (685), Expect = 1e-71, Method: Compositional matrix adjust. Identities = 136/247 (55%), Positives = 178/247 (72%) Query: 12 EAIIDVRGLRNQFGPQVVHDQLDLQVRRGEILGVVGGSGTGKSVLLRSIVGLQRPAAGQV 71 EA++ V G+ F + V + L+L V RGEILG +G SG GKSVL+R+I+ L AG + Sbjct: 36 EAVLSVEGVTVGFNGRNVLEDLNLDVYRGEILGFIGPSGAGKSVLMRAILRLLPRQAGAI 95 Query: 72 KVFGQDLSALSTEARSQYERRFGVLFQQGALFSSLTVLENIALPLTEYGGLDADEARGVS 131 ++ G D S + R ++R GVLFQQGALFS LTV ENI LP+ EY L ++ Sbjct: 96 RILGTDYDKASEDDRMMLDQRLGVLFQQGALFSGLTVKENIQLPMREYLDLPKKLMDELA 155 Query: 132 AMKLALAGLPIAAGDKTPAELSGGMIKRAALARALALDPDILFLDEPTAGLDPISAAAFD 191 +K+ + GL AGDK P+ELSGGMIKRAALARAL+LDPD++FLDEPT+GLDPI AA FD Sbjct: 156 YLKIEMVGLKPDAGDKYPSELSGGMIKRAALARALSLDPDLVFLDEPTSGLDPIGAAEFD 215 Query: 192 RLILTLRDALGLTVFLVTHDLDTLYAICDRVAVLSAKRVLVADRIEAVAAFDDPWIRQYF 251 LI LRD+LGLTV++VTHDLD+L+++CDR+AVL KRVLV ++ + A DDPW++ YF Sbjct: 216 MLIARLRDSLGLTVYMVTHDLDSLFSVCDRIAVLGDKRVLVEGTLQDMFACDDPWVQSYF 275 Query: 252 QGPRGRA 258 +G R R+ Sbjct: 276 RGKRARS 282 >CC2319 [Q] COG1127 ABC-type transport system involved in resistance to organic solvents, ATPase component Ccr Caulobacter vibrioides Length = 278 Score = 265 bits (678), Expect = 6e-71, Method: Compositional matrix adjust. Identities = 153/263 (58%), Positives = 186/263 (70%), Gaps = 6/263 (2%) Query: 1 MVTPAHDDQAVEAI------IDVRGLRNQFGPQVVHDQLDLQVRRGEILGVVGGSGTGKS 54 M PA D E I+VRGL ++FG VVHD LDL+V +GEILGVVGGSG+GKS Sbjct: 1 MTAPAFDAPGAETPDAERYPIEVRGLVSRFGDNVVHDGLDLKVEQGEILGVVGGSGSGKS 60 Query: 55 VLLRSIVGLQRPAAGQVKVFGQDLSALSTEARSQYERRFGVLFQQGALFSSLTVLENIAL 114 VLL SI+GL+ P G V++FG D+ S S ERR+GVLFQQGALFS+LTV EN+A Sbjct: 61 VLLNSIIGLKTPDDGHVRLFGGDMRVASRRRWSSVERRWGVLFQQGALFSNLTVRENVAA 120 Query: 115 PLTEYGGLDADEARGVSAMKLALAGLPIAAGDKTPAELSGGMIKRAALARALALDPDILF 174 PL E+ L E ++ +K+A+ GLP A PAELSGGM KRA LARALA+DP++LF Sbjct: 121 PLYEHTRLPRSEVEAIADLKIAMVGLPARAATLKPAELSGGMRKRAGLARALAMDPELLF 180 Query: 175 LDEPTAGLDPISAAAFDRLILTLRDALGLTVFLVTHDLDTLYAICDRVAVLSAKRVLVAD 234 LDEPTAGLDPI A AFD LI L D+L LTVF++THDLD+LY I DRVAVL+ K+V+ Sbjct: 181 LDEPTAGLDPIGAQAFDALIKDLSDSLELTVFMITHDLDSLYTITDRVAVLADKKVVTVA 240 Query: 235 RIEAVAAFDDPWIRQYFQGPRGR 257 + + D PWI+QYF GPRGR Sbjct: 241 PVGELERSDHPWIKQYFLGPRGR 263 >SMc00175 [Q] COG1127 ABC-type transport system involved in resistance to organic solvents, ATPase component Sme Sinorhizobium meliloti Length = 269 Score = 258 bits (660), Expect = 7e-69, Method: Compositional matrix adjust. Identities = 140/247 (56%), Positives = 179/247 (72%) Query: 12 EAIIDVRGLRNQFGPQVVHDQLDLQVRRGEILGVVGGSGTGKSVLLRSIVGLQRPAAGQV 71 EA++ VR L FG VV D L+L+V RGEILG VG SGTGKSVL+R+++ L +G + Sbjct: 17 EAVLSVRDLTVGFGDHVVLDNLNLEVLRGEILGFVGASGTGKSVLMRTVLRLLPKRSGTI 76 Query: 72 KVFGQDLSALSTEARSQYERRFGVLFQQGALFSSLTVLENIALPLTEYGGLDADEARGVS 131 ++ G D ++ R + R GVLFQ GALFS+LTV ENI +P+ EY L D ++ Sbjct: 77 EILGADYDSMGEAERIALDMRLGVLFQHGALFSALTVRENIQVPMREYLDLPQDLMDELA 136 Query: 132 AMKLALAGLPIAAGDKTPAELSGGMIKRAALARALALDPDILFLDEPTAGLDPISAAAFD 191 +K+ L GL A +K P+ELSGGMIKRAALARALALDPD++FLDEPT+GLDPI AA FD Sbjct: 137 RLKIELVGLAPEAAEKYPSELSGGMIKRAALARALALDPDLVFLDEPTSGLDPIGAAEFD 196 Query: 192 RLILTLRDALGLTVFLVTHDLDTLYAICDRVAVLSAKRVLVADRIEAVAAFDDPWIRQYF 251 LI LRD LGLTV++VTHDLD+L+++CDR+AVL KRVLV IE + A D+PW++ YF Sbjct: 197 ELIAKLRDTLGLTVYMVTHDLDSLFSVCDRIAVLGKKRVLVEGTIEDMLACDEPWVKSYF 256 Query: 252 QGPRGRA 258 +G R RA Sbjct: 257 RGKRARA 263