BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0010.0003.p         (95 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

RSp1230 [E] COG0346 Lactoylglutathione lyase and related lyases ...   137   6e-33
PA0880 [E] COG0346 Lactoylglutathione lyase and related lyases P...    94   8e-20
XF2305 [E] COG0346 Lactoylglutathione lyase and related lyases X...    91   6e-19
STM3117 [E] COG0346 Lactoylglutathione lyase and related lyases ...    90   1e-18
VCA0463 [E] COG0346 Lactoylglutathione lyase and related lyases ...    86   3e-17

>RSp1230 [E] COG0346 Lactoylglutathione lyase and related lyases Rso
           Ralstonia solanacearum
          Length = 126

 Score =  137 bits (345), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 70/104 (67%), Positives = 75/104 (72%), Gaps = 12/104 (11%)

Query: 3   LIDHLDHLVLTSVDPAATEYFYVDVLGMTLETFGEGRKAFRFGNQKINLHVRGKEFEPKA 62
           +IDHLDHLVLTS  P AT  FY  VLGM LE FGEGR AFRFGNQKINLHVRG+EFEPKA
Sbjct: 1   MIDHLDHLVLTSTQPDATIDFYTRVLGMQLERFGEGRIAFRFGNQKINLHVRGQEFEPKA 60

Query: 63  HLPV------------PLEQVIARLQEKGWPIIEGPVLRTGATH 94
           HLPV            PL+ VI RL +  WPI+EGPV RTGAT 
Sbjct: 61  HLPVPGALDLCFIAAIPLDAVIERLAQADWPIVEGPVARTGATQ 104


>PA0880 [E] COG0346 Lactoylglutathione lyase and related lyases Pae
           Pseudomonas aeruginosa
          Length = 126

 Score = 94.0 bits (232), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 54/101 (53%), Positives = 60/101 (59%), Gaps = 12/101 (11%)

Query: 4   IDHLDHLVLTSVDPAATEYFYVDVLGMTLETFGEGRKAFRFGNQKINLHVRGKEFEPKAH 63
           ID LDHLVLT  D  A+  FY  VLGM   TFG GRKA  FG QKINLH  G EFEPKA 
Sbjct: 3   IDRLDHLVLTVRDIDASIDFYTRVLGMRAVTFGAGRKALAFGAQKINLHQAGGEFEPKAE 62

Query: 64  LP------------VPLEQVIARLQEKGWPIIEGPVLRTGA 92
            P             PLE V  +L+++   I+EGPV RTGA
Sbjct: 63  RPTPGSADLCFIVATPLEAVAEQLRQQAVEILEGPVQRTGA 103


>XF2305 [E] COG0346 Lactoylglutathione lyase and related lyases Xfa Xylella
           fastidiosa 9a5c
          Length = 127

 Score = 90.9 bits (224), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 45/103 (43%), Positives = 62/103 (60%), Gaps = 12/103 (11%)

Query: 3   LIDHLDHLVLTSVDPAATEYFYVDVLGMTLETFGEGRKAFRFGNQKINLHVRGKEFEPKA 62
           +I  +DH+V+T+ D      FY  +LGM L  FG+ R AF+FG QKIN+H  GKE EPKA
Sbjct: 1   MISCIDHIVITTRDIKVCSDFYTRILGMELIQFGDNRIAFKFGQQKINVHEYGKEIEPKA 60

Query: 63  HLPVP------------LEQVIARLQEKGWPIIEGPVLRTGAT 93
           HLPVP            ++++   L++    I++GPV RTGA 
Sbjct: 61  HLPVPGSLDICLISSYSIDEIKKVLEKNDIVIVDGPVSRTGAC 103


>STM3117 [E] COG0346 Lactoylglutathione lyase and related lyases Sty
           Salmonella typhimurium LT2
          Length = 144

 Score = 90.1 bits (222), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 48/103 (46%), Positives = 61/103 (59%), Gaps = 12/103 (11%)

Query: 3   LIDHLDHLVLTSVDPAATEYFYVDVLGMTLETFGEGRKAFRFGNQKINLHVRGKEFEPKA 62
           +ID +DHLVLT  D + T  FY +VLG +  TF + RKA  FG QKINLH +  EFEPKA
Sbjct: 20  IIDRIDHLVLTVSDISTTIRFYEEVLGFSAVTFKQNRKALIFGAQKINLHQQEMEFEPKA 79

Query: 63  HLP------------VPLEQVIARLQEKGWPIIEGPVLRTGAT 93
             P             P+  V++ + + G  I+EGPV RTGAT
Sbjct: 80  SRPTPGSADLCFITSTPINDVVSEILQAGISIVEGPVERTGAT 122


>VCA0463 [E] COG0346 Lactoylglutathione lyase and related lyases Vch Vibrio
           cholerae
          Length = 132

 Score = 85.5 bits (210), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 48/101 (47%), Positives = 55/101 (54%), Gaps = 12/101 (11%)

Query: 4   IDHLDHLVLTSVDPAATEYFYVDVLGMTLETFGEGRKAFRFGNQKINLHVRGKEFEPKAH 63
           I HLDHLVLT  D   T  FY  VLGM   +FG GR A  FG+QKINLH  G EFEPKA 
Sbjct: 7   ISHLDHLVLTVADIPTTTNFYEKVLGMKAVSFGAGRIALEFGHQKINLHQLGNEFEPKAQ 66

Query: 64  ------------LPVPLEQVIARLQEKGWPIIEGPVLRTGA 92
                           L   +  ++ +G  I+EGPV RTGA
Sbjct: 67  NVRVGSADLCFITDTVLSDAMKHVENQGVTIMEGPVKRTGA 107