BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0008.0159.p         (182 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

mll8067_1 [T] COG2202 FOG Mlo Mesorhizobium loti                      123   2e-28
AGl1617_1 [T] COG2202 FOG Atu Agrobacterium tumefaciens strain C...   112   5e-25
PA1243_1 [T] COG2202 FOG Pae Pseudomonas aeruginosa                   105   8e-23
AGpA788_1 [T] COG2202 FOG Atu Agrobacterium tumefaciens strain C...    99   7e-21
CC0836_1 [T] COG2202 FOG Ccr Caulobacter vibrioides                    96   5e-20

>mll8067_1 [T] COG2202 FOG Mlo Mesorhizobium loti
          Length = 349

 Score =  123 bits (309), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 61/157 (38%), Positives = 91/157 (57%), Gaps = 1/157 (0%)

Query: 14  GGEMGKLIRAMDWSSTPLGPLDSWPQSLRTAVSLCLSSTFPILIAWGPHDIQIYNDAYRP 73
            GEM + I +  WS+T +GP+ SWP  L+T V L L S  P+ + WG   I +YNDA+ P
Sbjct: 52  AGEMAERIGSFGWSATSIGPVSSWPTELKTLVDLILGSAQPMFVVWGQDRIWLYNDAFIP 111

Query: 74  ICGAKHPESMGQDFRICWATALPVVGDAFDRAHQGEGTYIRDQRMFLDRYGYLEEAFMTF 133
           I G KHP ++G   +  WA A   +G  FD  +QG+  ++ D  + +D++G  EE    F
Sbjct: 112 ILGRKHPTALGLPSQQVWAEAWETIGPMFDLVYQGQSVHMDDIEIRIDKHGAPEETHFAF 171

Query: 134 SFSPI-RVESGEVGGVFHPISESTDKVLGRAPHRRLA 169
           S++PI + E+G  GG+F   +E+TD+ L     R  A
Sbjct: 172 SYNPITQPETGTTGGLFGVCTETTDRFLAEKRERLAA 208


>AGl1617_1 [T] COG2202 FOG Atu Agrobacterium tumefaciens strain C58 (Cereon)
          Length = 469

 Score =  112 bits (279), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 58/150 (38%), Positives = 77/150 (51%)

Query: 10  WLSGGGEMGKLIRAMDWSSTPLGPLDSWPQSLRTAVSLCLSSTFPILIAWGPHDIQIYND 69
           W  GGGE G+L+R  DWS T LGP+  WPQ+LR   +  ++S  P ++ WG   + IYND
Sbjct: 10  WPIGGGETGELVRRFDWSKTSLGPICDWPQNLRQKANSVVNSPIPQVLMWGSDHVMIYND 69

Query: 70  AYRPICGAKHPESMGQDFRICWATALPVVGDAFDRAHQGEGTYIRDQRMFLDRYGYLEEA 129
            Y  I G  HP ++G      W           +   +GE    RDQ M L R+G  EE 
Sbjct: 70  GYAEIAGNYHPRALGGTVPGIWPEIWDWNSRILEAGFRGEVMAYRDQPMTLMRHGVPEEV 129

Query: 130 FMTFSFSPIRVESGEVGGVFHPISESTDKV 159
                ++PI  E G V GV   + E+TDKV
Sbjct: 130 IFDLFYTPIYNEGGTVDGVLCTVLENTDKV 159


>PA1243_1 [T] COG2202 FOG Pae Pseudomonas aeruginosa
          Length = 190

 Score =  105 bits (261), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 52/155 (33%), Positives = 93/155 (60%), Gaps = 7/155 (4%)

Query: 9   SWLSGGGEMGKLIRAMDWSSTPLGPLDSWPQSLRTAVSLCLSSTFPILIAWGPHDIQIYN 68
           ++L+ GG +GKL+ ++D +S+PLGP D+W  SL+T ++  L +   I++ WG   + +YN
Sbjct: 19  AFLANGGAVGKLLLSLDAASSPLGPPDAWSASLKTTMATLLPAKAQIVLFWGAEFVALYN 78

Query: 69  DAYRPICGAKHPESMG----QDFRICWATALPVVGDAFDRAHQGEGTYIRDQRMFLDRYG 124
           DAY P  G KHP ++G    +++R  W    P++   ++    GE    +D+  +++R+G
Sbjct: 79  DAYAPSIGDKHPRALGRPAIENWRELWDDLEPLLRGVYE---TGETFAAKDRPFYIERHG 135

Query: 125 YLEEAFMTFSFSPIRVESGEVGGVFHPISESTDKV 159
             E  +   S+S +R   G VGGV   ++E+T++V
Sbjct: 136 RGETVYFDVSYSAVRETDGSVGGVLCIVTETTERV 170


>AGpA788_1 [T] COG2202 FOG Atu Agrobacterium tumefaciens strain C58 (Cereon)
          Length = 415

 Score = 98.6 bits (244), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 51/154 (33%), Positives = 80/154 (51%), Gaps = 7/154 (4%)

Query: 17  MGKLIRAMDWSSTPLGPLDSWPQSLRTAVSLCLSSTFPILIAWGPHDIQIYNDAYRPICG 76
           +  L+   DW+S PLGP   WP  L  A+ + L S   I++ WG   + +YND Y P  G
Sbjct: 25  VASLLDVTDWASGPLGPRSEWPACLHAAIGIMLPSQAQIVMFWGQEFVALYNDIYAPTIG 84

Query: 77  AKHPESMGQDFR----ICWATALPVVGDAFDRAHQGEGTYIRDQRMFLDRYGYLEEAFMT 132
            KHP + G+  R      W    P++    D+   GE    +D+  +++R+GY E  +  
Sbjct: 85  NKHPHAFGRPAREYWNELWDDLEPLLKRVLDK---GETIAAKDRPFYIERHGYPETVYFD 141

Query: 133 FSFSPIRVESGEVGGVFHPISESTDKVLGRAPHR 166
            S+SP+  + G V GVF  ++E+T++V   A  R
Sbjct: 142 ISYSPVTDQDGIVRGVFCIVNETTERVKADAALR 175


>CC0836_1 [T] COG2202 FOG Ccr Caulobacter vibrioides
          Length = 550

 Score = 95.5 bits (236), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 56/154 (36%), Positives = 77/154 (50%), Gaps = 12/154 (7%)

Query: 14  GGEMGKLIRAMDWSSTPLGPLDSWPQSLRTAVSLCLSSTFPILIAWGPHDIQIYNDAYRP 73
           GGEM   +RA DWS TPLGP + W  +LR A  + L+S FP+ + WGP  + IYND Y P
Sbjct: 17  GGEMAARVRAFDWSKTPLGPREDWSPALRLATDIVLASNFPMALRWGPELVLIYNDGYAP 76

Query: 74  ICGAKHPESMGQDFRICWATALPVVGDAFDRAHQ----GEGTYIRDQRMFLD--RYGYLE 127
               +HP ++GQ F        P    A    HQ    G       +R+ L   + G LE
Sbjct: 77  ALHERHPSALGQSFY----DTTPEFQAALRELHQDILTGTSGGFAFERLPLKVLKNGVLE 132

Query: 128 EAFMTFSFSPIRVESGE--VGGVFHPISESTDKV 159
            A+ T ++SP+  E+    +GGV     E +  V
Sbjct: 133 AAYFTVNYSPVPDETAPNGIGGVLVAAVEISQSV 166