BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0008.0052.p (373 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value RSc0713_1 [H] COG0108 3,4-dihydroxy-2-butanone 4-phosphate synth... 346 6e-95 NMB1256_1 [H] COG0108 3,4-dihydroxy-2-butanone 4-phosphate synth... 303 3e-82 NMA1429_1 [H] COG0108 3,4-dihydroxy-2-butanone 4-phosphate synth... 299 9e-81 VC2269_1 [H] COG0108 3,4-dihydroxy-2-butanone 4-phosphate syntha... 278 1e-74 PA4054_1 [H] COG0108 3,4-dihydroxy-2-butanone 4-phosphate syntha... 265 1e-70 >RSc0713_1 [H] COG0108 3,4-dihydroxy-2-butanone 4-phosphate synthase Rso Ralstonia solanacearum Length = 226 Score = 346 bits (887), Expect = 6e-95, Method: Compositional matrix adjust. Identities = 166/203 (81%), Positives = 180/203 (88%) Query: 1 MPLATTEEIVAELRAGRMVILVDEEDRENEGDLVLATDFVTPEAINFMVTHARGLVCLTL 60 M +AT EEI+AE+RAGRMVILVDEEDRENEGDL+LA DFVTPEAINFM RGL+CLTL Sbjct: 24 MSIATVEEIIAEIRAGRMVILVDEEDRENEGDLILAADFVTPEAINFMARFGRGLICLTL 83 Query: 61 TEEHVDQLDLPLMATRNGTPYGTNFTVSIEAAEGVTTGISAADRARTIQVAASKGAKPSD 120 T E QLDLPLM TRNGTP+GTNFTVSIEAAEGVTTGISAADRART+QVA ++ A P D Sbjct: 84 TAERCRQLDLPLMVTRNGTPHGTNFTVSIEAAEGVTTGISAADRARTVQVAVARSASPDD 143 Query: 121 LVQPGHIFPLRAQKGGVLMRAGHTEAGCDLTAMAGLTPASVICEILKDDGTMARLPDLLE 180 LVQPGHIFPL AQ GGVLMRAGHTEAGCDL ++AGLTPASVICEI+KDDGTMARLPDL+E Sbjct: 144 LVQPGHIFPLMAQPGGVLMRAGHTEAGCDLASLAGLTPASVICEIMKDDGTMARLPDLVE 203 Query: 181 FAEKHHLKIGTIADLIHYRSRNE 203 FA +H LKIGTIADLI YRSR E Sbjct: 204 FAREHGLKIGTIADLIQYRSRTE 226 >NMB1256_1 [H] COG0108 3,4-dihydroxy-2-butanone 4-phosphate synthase Nme Neisseria meningitidis MC58 Length = 204 Score = 303 bits (777), Expect = 3e-82, Method: Compositional matrix adjust. Identities = 143/196 (72%), Positives = 166/196 (84%) Query: 8 EIVAELRAGRMVILVDEEDRENEGDLVLATDFVTPEAINFMVTHARGLVCLTLTEEHVDQ 67 EI+A+++AG+MVI+ D EDRENEGDL++A FVTPEAINFM+ HARGLVCL + E V++ Sbjct: 9 EILADIKAGKMVIITDAEDRENEGDLLMAAQFVTPEAINFMIKHARGLVCLPMDGEMVEK 68 Query: 68 LDLPLMATRNGTPYGTNFTVSIEAAEGVTTGISAADRARTIQVAASKGAKPSDLVQPGHI 127 L LP+M +NG YGTNFTVSIEAA G+TTGISAADRA TIQ A S AKP D+VQPGHI Sbjct: 69 LGLPMMTQKNGAQYGTNFTVSIEAAHGITTGISAADRALTIQTAVSPTAKPEDIVQPGHI 128 Query: 128 FPLRAQKGGVLMRAGHTEAGCDLTAMAGLTPASVICEILKDDGTMARLPDLLEFAEKHHL 187 FPLRAQKGGVL+RAGHTEAG DL M GL PASVICEI+ DDGTMAR+P+L++FAE+H L Sbjct: 129 FPLRAQKGGVLVRAGHTEAGVDLAQMNGLIPASVICEIINDDGTMARMPELMKFAEEHKL 188 Query: 188 KIGTIADLIHYRSRNE 203 KIGTIADLI YRSR E Sbjct: 189 KIGTIADLIEYRSRTE 204 >NMA1429_1 [H] COG0108 3,4-dihydroxy-2-butanone 4-phosphate synthase NmA Neisseria meningitidis Z2491 Length = 204 Score = 299 bits (765), Expect = 9e-81, Method: Compositional matrix adjust. Identities = 140/196 (71%), Positives = 164/196 (83%) Query: 8 EIVAELRAGRMVILVDEEDRENEGDLVLATDFVTPEAINFMVTHARGLVCLTLTEEHVDQ 67 EI+A+++ G+MVI+ D EDRENEGDL++A FVTPEAINFM+ HARGLVCL + E V++ Sbjct: 9 EILADIKVGKMVIITDAEDRENEGDLLMAAQFVTPEAINFMIKHARGLVCLPMDGEMVEK 68 Query: 68 LDLPLMATRNGTPYGTNFTVSIEAAEGVTTGISAADRARTIQVAASKGAKPSDLVQPGHI 127 L LP+M +NG YGTNFTVSIEAA G+TTGISAADRA TIQ A S AKP D+VQPGHI Sbjct: 69 LGLPMMTQKNGAQYGTNFTVSIEAAHGITTGISAADRALTIQTAVSPTAKPEDIVQPGHI 128 Query: 128 FPLRAQKGGVLMRAGHTEAGCDLTAMAGLTPASVICEILKDDGTMARLPDLLEFAEKHHL 187 FPLRAQKGGVL+RAGHTEAG DL M GL PA+VICEI+ DDGTMAR+P+L++FAE+H L Sbjct: 129 FPLRAQKGGVLVRAGHTEAGVDLAQMNGLIPAAVICEIINDDGTMARMPELMKFAEEHKL 188 Query: 188 KIGTIADLIHYRSRNE 203 KIGTI DLI YRSR E Sbjct: 189 KIGTITDLIEYRSRTE 204 >VC2269_1 [H] COG0108 3,4-dihydroxy-2-butanone 4-phosphate synthase Vch Vibrio cholerae Length = 203 Score = 278 bits (711), Expect = 1e-74, Method: Compositional matrix adjust. Identities = 141/203 (69%), Positives = 163/203 (80%) Query: 1 MPLATTEEIVAELRAGRMVILVDEEDRENEGDLVLATDFVTPEAINFMVTHARGLVCLTL 60 MP++T +EI+ ++R G+MVIL+D+EDRENEGDL++A + +TP AINFM TH RGL+CLTL Sbjct: 1 MPISTPQEIIEDIRQGKMVILMDDEDRENEGDLIMAAEHITPAAINFMATHGRGLICLTL 60 Query: 61 TEEHVDQLDLPLMATRNGTPYGTNFTVSIEAAEGVTTGISAADRARTIQVAASKGAKPSD 120 T+E +L L M N Y TNFTVSIEAAEGVTTGISAADRART+Q A +K AK +D Sbjct: 61 TKERCRRLGLNPMVQDNNAQYTTNFTVSIEAAEGVTTGISAADRARTVQAAVAKEAKAAD 120 Query: 121 LVQPGHIFPLRAQKGGVLMRAGHTEAGCDLTAMAGLTPASVICEILKDDGTMARLPDLLE 180 LVQPGHIFPL AQ GGVL RAGHTEAGCDL +AGL PASVI EIL DDGTMAR PDL Sbjct: 121 LVQPGHIFPLAAQDGGVLTRAGHTEAGCDLARLAGLEPASVIVEILNDDGTMARRPDLEV 180 Query: 181 FAEKHHLKIGTIADLIHYRSRNE 203 FAEKH LK+GTIADLI YR+ E Sbjct: 181 FAEKHGLKLGTIADLIEYRNHTE 203 >PA4054_1 [H] COG0108 3,4-dihydroxy-2-butanone 4-phosphate synthase Pae Pseudomonas aeruginosa Length = 205 Score = 265 bits (677), Expect = 1e-70, Method: Compositional matrix adjust. Identities = 130/199 (65%), Positives = 158/199 (79%) Query: 1 MPLATTEEIVAELRAGRMVILVDEEDRENEGDLVLATDFVTPEAINFMVTHARGLVCLTL 60 M L T +E++ ++R G+MVIL+D+EDRENEGDL++A + V E INFMV HARGLVC+ + Sbjct: 1 MALNTIDELIEDIRQGKMVILMDDEDRENEGDLIMAAECVRTEDINFMVKHARGLVCMPM 60 Query: 61 TEEHVDQLDLPLMATRNGTPYGTNFTVSIEAAEGVTTGISAADRARTIQVAASKGAKPSD 120 T E ++L LPLM RNG+ +GT FTVSIEAAEGVTTGISAADRART+Q AA+K A +D Sbjct: 61 TRERCERLGLPLMVQRNGSGFGTKFTVSIEAAEGVTTGISAADRARTVQAAAAKNAVAAD 120 Query: 121 LVQPGHIFPLRAQKGGVLMRAGHTEAGCDLTAMAGLTPASVICEILKDDGTMARLPDLLE 180 +V PGHIFPL AQ GG L RAGHTEA CDL MAG P+ VICE++ DDG+MAR P+L Sbjct: 121 IVSPGHIFPLMAQPGGTLARAGHTEAACDLARMAGFEPSGVICEVMNDDGSMARRPELEA 180 Query: 181 FAEKHHLKIGTIADLIHYR 199 FA +H +KIGTIADLIHYR Sbjct: 181 FAAEHGIKIGTIADLIHYR 199