BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0008.0023.p         (253 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

RSc2194 [S] COG0799 Uncharacterized homolog of plant Iojap prote...   176   4e-44
NMB2023 [S] COG0799 Uncharacterized homolog of plant Iojap prote...   105   7e-23
NMA0417 [S] COG0799 Uncharacterized homolog of plant Iojap prote...   105   7e-23
PA4005 [S] COG0799 Uncharacterized homolog of plant Iojap protei...   100   6e-21
aq_1272 [S] COG0799 Uncharacterized homolog of plant Iojap prote...    87   4e-17

>RSc2194 [S] COG0799 Uncharacterized homolog of plant Iojap protein Rso
           Ralstonia solanacearum
          Length = 203

 Score =  176 bits (446), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 88/152 (57%), Positives = 106/152 (69%), Gaps = 24/152 (15%)

Query: 1   MDIKKLQTLVVDALEDVKAQEIRIYDTSHLTSLFDRVAIASGTSNRQTKALAASVRDKVK 60
           MDI+KLQ ++VDALEDVKAQ+I++++T+HLT LFDR  IASGTSNRQTKALAASVRD VK
Sbjct: 1   MDIRKLQRVIVDALEDVKAQDIKVFNTTHLTELFDRTVIASGTSNRQTKALAASVRDAVK 60

Query: 61  AKGGNVVSVEGEDTGEWVLVDLGDMIVHIMQPAIRTYYRLEEIWGDKEVKLGAAKRTGTS 120
             GG+V++VEGED GEWVLVD GD +VHIMQP +R YY LEEIWGDK V++   +  GTS
Sbjct: 61  EAGGHVIAVEGEDVGEWVLVDCGDAVVHIMQPQLRQYYNLEEIWGDKPVRI---QLGGTS 117

Query: 121 AAAKRAAVDEAPAPKTRRTRAQAEAVEASQAL 152
                        PK            AS+  
Sbjct: 118 GRG---------LPK------------ASEGY 128


>NMB2023 [S] COG0799 Uncharacterized homolog of plant Iojap protein Nme
           Neisseria meningitidis MC58
          Length = 128

 Score =  105 bits (263), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 50/104 (48%), Positives = 74/104 (71%), Gaps = 1/104 (0%)

Query: 2   DIKKLQTLVVDALEDVKAQEIRIYDTSHLTSLFDRVAIASGTSNRQTKALAASVRDKVKA 61
           D++K+  + V+AL D+KA++I + +T   TSLF R+ IASG S RQ KALA +V   +K 
Sbjct: 8   DLQKMVGVAVNALGDIKAKDISVLETQDKTSLFARMIIASGDSTRQVKALANNVAVDLKE 67

Query: 62  KGGNVVSVEGEDTGEWVLVDLGDMIVHIMQPAIRTYYRLEEIWG 105
            G  ++S EG D+GEW LVD GD++VH+M PA+R +Y ++ +WG
Sbjct: 68  AGFEILSTEG-DSGEWTLVDAGDLVVHVMLPAVRDFYDIDTLWG 110


>NMA0417 [S] COG0799 Uncharacterized homolog of plant Iojap protein NmA
           Neisseria meningitidis Z2491
          Length = 128

 Score =  105 bits (263), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 50/104 (48%), Positives = 74/104 (71%), Gaps = 1/104 (0%)

Query: 2   DIKKLQTLVVDALEDVKAQEIRIYDTSHLTSLFDRVAIASGTSNRQTKALAASVRDKVKA 61
           D++K+  + V+AL D+KA++I + +T   TSLF R+ IASG S RQ KALA +V   +K 
Sbjct: 8   DLQKMVGVAVNALGDIKAKDISVLETQDKTSLFARMIIASGDSTRQVKALANNVAVDLKE 67

Query: 62  KGGNVVSVEGEDTGEWVLVDLGDMIVHIMQPAIRTYYRLEEIWG 105
            G  ++S EG D+GEW LVD GD++VH+M PA+R +Y ++ +WG
Sbjct: 68  AGFEILSTEG-DSGEWTLVDAGDLVVHVMLPAVRDFYDIDTLWG 110


>PA4005 [S] COG0799 Uncharacterized homolog of plant Iojap protein Pae
           Pseudomonas aeruginosa
          Length = 118

 Score = 99.8 bits (247), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 48/104 (46%), Positives = 69/104 (66%)

Query: 1   MDIKKLQTLVVDALEDVKAQEIRIYDTSHLTSLFDRVAIASGTSNRQTKALAASVRDKVK 60
           M  ++L  + +DALED+KAQ+I   D    TS+ D + IA G+S+RQ K+LA +V  K K
Sbjct: 1   MQTEQLVQVAIDALEDLKAQDIVTLDVRDKTSVTDYMVIACGSSSRQVKSLADNVLTKAK 60

Query: 61  AKGGNVVSVEGEDTGEWVLVDLGDMIVHIMQPAIRTYYRLEEIW 104
             G   +  EG ++GEW L+DLGD++VH+M PA R +Y LE +W
Sbjct: 61  ENGVKPLGSEGLESGEWALLDLGDVVVHVMLPATRQFYDLERLW 104


>aq_1272 [S] COG0799 Uncharacterized homolog of plant Iojap protein Aae
           Aquifex aeolicus
          Length = 109

 Score = 87.0 bits (214), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 42/98 (42%), Positives = 61/98 (62%)

Query: 9   LVVDALEDVKAQEIRIYDTSHLTSLFDRVAIASGTSNRQTKALAASVRDKVKAKGGNVVS 68
           L+ + LE+ KA++I I D S LT+L D   IA+  S    +ALA  + ++++ +G  +  
Sbjct: 6   LIKELLENKKAEDIVILDVSKLTNLADYFVIATANSTTHARALADYLEEELEKRGIEIDH 65

Query: 69  VEGEDTGEWVLVDLGDMIVHIMQPAIRTYYRLEEIWGD 106
           +EG+D G W+L+DL D IVHI  P  R YY LE IW D
Sbjct: 66  IEGKDYGHWILIDLIDTIVHIFTPETREYYGLEWIWAD 103