BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0007.0170.p (1434 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value RSc2657 Non COG 606 e-172 STM3369 [S] COG3164 Predicted membrane protein Sty Salmonella ty... 212 6e-54 XF1126 [S] COG3164 Predicted membrane protein Xfa Xylella fastid... 209 3e-53 VC0420 [S] COG3164 Predicted membrane protein Vch Vibrio cholerae 197 2e-49 Z4604 [S] COG3164 Predicted membrane protein EcZ Escherichia col... 196 2e-49 >RSc2657 Non COG Length = 1426 Score = 606 bits (1563), Expect = e-172, Method: Compositional matrix adjust. Identities = 442/1375 (32%), Positives = 653/1375 (47%), Gaps = 91/1375 (6%) Query: 55 FLVLRYAVLPEVGHYKPRIEALISHQLGRTVSIETIDASWSGLRPQLSLTNLTVHDQQGE 114 L++R+ + P VG + +E S L V I ++ W G P + D G Sbjct: 81 ILLVRFVLWPRVGLAREWMERQASVTLQAKVGIGALETYWEGWHPAFRAQRIEALDAAGR 140 Query: 115 AALSLPRVSTTLSWSSVLVASLRLENLSIEGADLAIRRDAAGKLYVAGIPV--PAGGDGS 172 ++ V LSW S+ + L AD+ +RRDA G L VAGI V AG DG+ Sbjct: 141 RTFAVQDVQARLSWRSLPRLQITFAVLHASQADVLVRRDATGALSVAGIKVEPSAGSDGT 200 Query: 173 NLDWLLSQREIVIRHSKLRWDDELRQAPELVLEDVNLVLHNRWLRHRLSLRAIPPQDMAA 232 D LLSQ +I R +RW D+ PE L +V L L N RHRL A Sbjct: 201 FFDQLLSQGDIDFRDGAVRWLDQQHGLPEAALGNVRLHLRNGPTRHRLDASATSATLFNG 260 Query: 233 PLDVRADFSHPAFARSSDIARWKGLLYADLRNTELSVWRAWFDYPIAINSGRGSVRAWLT 292 P+ +RADF H AR D W G + L+ + + + G + + Sbjct: 261 PIKLRADFRHDLLARPGDWRHWHGQANWQVDALRLATLQRYLPVLASATGGTLTSDGSVE 320 Query: 293 LDHAKVANFTADLGLTDFNARLSRQLEPLSLKRV-----NGRISASE-----------TL 336 + A L + +L + L+P+ L+ + + R ++ E L Sbjct: 321 FSGGTLTRGQARLTGQQIDLQLRQDLDPIRLRSLQVLGSHQRSASGEHTLRLETLQWLPL 380 Query: 337 GPNAEDGVPTFGANGHQVTLTDFSIETPDGFVLPP-----TSIAESYEPATPLKAERTSV 391 P + VP Q TL ++E P P ++ + + L+ R V Sbjct: 381 SPASPQAVPLPAPA--QATLAGPTLEAPANPAGTPRGLRNVTVGWAVDAHAALR--RLQV 436 Query: 392 KATYLNLQTLSQLATRLPLAPSQRKLLDDLAPRGELHDFTVQWQ---------GTYPELS 442 KA L+L + +AT LPL L P G L D + WQ PE Sbjct: 437 KAATLDLADVRAIATALPLPADVLDPLRSKQPTGRLDDLDINWQRDVSRWRPNSPAPEHY 496 Query: 443 SYRVNGRFKGLGLKGLPA-----HVEPRKNAAQQARAQWAAFPGFSNLSGEIDASEKGGS 497 S R G LPA H EP A PG NLSG + S+ G+ Sbjct: 497 SGHGTLRQVSFGPGPLPAVPPGHHPEP-------------AVPGVENLSGNVVFSDDKGT 543 Query: 498 VKVDAQQLAFELPTDLFRESSLPFDSLKLQARWQYLKDQTLQVDLDQMQFAQPGVAGSLS 557 +++D+ +A LP +F ES +P D L+ W + Q L V D + F+ ++ ++ Sbjct: 544 LRIDSADVALLLP-GVFDESRVPLDRLQGTFTWTR-RQQELVVSSDNLTFSNADLSARIT 601 Query: 558 GQHLLPLQGRSAGSVDLHGELTSFDVKAIRRYLPQHMSEPLHRWLTEGLLAGNLKEVQFK 617 G + G+VDL G L V + RYLP + + L +L+ L G V F Sbjct: 602 GSYRHAPDTSHIGAVDLKGTLDQAMVPRVPRYLPLSLPQHLRDYLSGALQTGTASNVTFV 661 Query: 618 LKGALADFPFHTTKPGEQPKGVFQLAGEFEGLKLNYTPGHVGRD--GKEPE----WPLLE 671 L G L DFP+ KG F++ + + P GR+ G P WP Sbjct: 662 LAGDLFDFPYRAPH-----KGSFRVEVPIKDVTYQAAPLEAGRNPPGSVPAHPGGWPSFT 716 Query: 672 EGRGRISVDRTRLEIKADSARTLGARLGPVTARVADVDSHDAVLEIDGVANGPMPAFLQY 731 G + D+ L K AR +G L VT + D+ S +L IDG A+G FLQY Sbjct: 717 GIEGTVVFDKPSLSFKVARARVMGVNLTDVTGSLPDMGSAQPLLVIDGHADGATQGFLQY 776 Query: 732 VNQSPVARWTGNVMEHSTATGEARLDLKFQMPLHHAIDTRAQGAFNFANNDVDLLPELPP 791 V SPV W G+ + A G A L LK ++PLH TRAQG+ F +NDV L+P+ PP Sbjct: 777 VEASPVGEWIGHFTRETRAQGNATLALKLELPLHEMHATRAQGSVGFLHNDVTLIPQAPP 836 Query: 792 IYRTSGKVEFNERGFTLNGVRGQFLGDNLAISGGTQKDGSSQVRLDGAINIENLRKQYPE 851 + +G + F +RG + +R +F G + +GGT DG+ ++++ G + + LR P Sbjct: 837 LADVTGTLTFTQRGIGFDNLRARFAGGEIRPTGGTLPDGTIRIQVAGTASAQGLRDTTPA 896 Query: 852 PSLQRLLAR-FSGGTRYSATVLVRQHQPEVTVESSLAGLGVDLPVPLRKGVQDSLPMRFD 910 S +AR G YSAT+ V+Q + V V+S L + V LP PL K LP+RF+ Sbjct: 897 DSAVAAVARALDGSAPYSATISVKQRRATVLVQSDLTPMTVRLPAPLAKAAGQPLPVRFE 956 Query: 911 LLPLASSDPLIEREEMRVSLGSNVASRYVRERVAAKGNEWRVTSGGIGWNQPAPTPASGL 970 + P A+ + + +E+ + LG+ V +RY +R +A G E V GGIG QP P PA G+ Sbjct: 957 MRPAANGN-AADIDEVLLQLGNVVNARY-EQRSSASGTE--VLRGGIGVRQPVPQPADGV 1012 Query: 971 KLALATDSLDADAWLALKKDLAGKDAAAAGNGAAAGNRLGNSDVTQYLEPDSVSARVGEL 1030 A+A D LD DAW + A A + AAA GN YL P ++ R L Sbjct: 1013 LAAIALDRLDIDAWRQVFAAPAAAAADKSAGTAAASPARGNP----YL-PTRLAGRAQAL 1067 Query: 1031 NLMGKKLNKLILEAAHRRNAWQINLESQQAAGTVTWDEPGSASGAGKVTARLSSLVIPKS 1090 ++G+ N + ++A+ WQ ++S++ AGT W + G++T RLS + IP + Sbjct: 1068 RILGRDFNAVSVDASRDGANWQSTIDSREIAGTARWHAESATVPFGELTMRLSRMSIPDA 1127 Query: 1091 SPTADAAPPASADKTDDNLQ-MPALDIRAEQFELGGKKLGRLELDASNILTSVGREWRIS 1149 + A + N Q +P+LD+ A+ F+L GK LGRLEL A + ++ W + Sbjct: 1128 REES-----ALTESLARNTQEIPSLDLVADSFDLRGKPLGRLELKARSQISDGAPVWTLE 1182 Query: 1150 RLLLANPDAQFRAAGNWLT----FGSNHTSNFT---YALDIEDAGKLLERFGYPGTIRGG 1202 L L P A A G W GS+ T + LD+ ++G+LL++ G+ + G Sbjct: 1183 TLKLDQPAATLTAQGTWRIPRRLRGSDDPERRTLLDFRLDLRNSGELLQKMGFAKVLDGA 1242 Query: 1203 RGKLDGDLSWKAPPYAMDMATLAGQVHMDVHSGQFLKVDPGAAKLLGVLNLQALPRRLTL 1262 RG L+G + W+ P ++D+ +L G++ +++ GQFL VDPG AKL GVL+LQ L Sbjct: 1243 RGTLEGRVVWRGSPMSLDLPSLNGRMALNLERGQFLPVDPGLAKLAGVLSLQGL-LHFAT 1301 Query: 1263 DFRDVFSEGFAFDTVAGTASIAKGIASTDNLKMAGVTASVLMSGSADIARETQDLHVVVI 1322 D R G F++VA T +IA GIA TD+ + G V M GSA+I ETQDL V V Sbjct: 1302 DLRGATGRGTPFESVAATGTIASGIARTDDFAVKGPQFQVAMQGSANILEETQDLRVTVT 1361 Query: 1323 PEINLGTASVVAMAVNPVVGVSTLLAQLFLRNPVMKSLSFEYKVTGPWSDPIVVK 1377 P+++ +AS+ A +NP +G+ TL AQL L + + K+ + +Y+VTG W+DP + K Sbjct: 1362 PKVDATSASLAAAFINPAIGLGTLAAQLILGDQMSKAFATQYRVTGSWADPKIEK 1416 >STM3369 [S] COG3164 Predicted membrane protein Sty Salmonella typhimurium LT2 Length = 1266 Score = 212 bits (539), Expect = 6e-54, Method: Compositional matrix adjust. Identities = 332/1393 (23%), Positives = 544/1393 (39%), Gaps = 179/1393 (12%) Query: 41 LKLLLAAYFVFCALFLVLRYAVLPEVGHYKPRIEALISHQLGRTVSIETIDASWSGLRPQ 100 L L AA V AL + LP + ++P I I G V+ + ASW P Sbjct: 8 LLLTGAALIVIAALLVSGLRLALPHLDAWRPAILNKIESVTGVPVAASQLSASWQNFGPT 67 Query: 101 LSLTNLTVHDQQGEAALSLPRVSTTLS-WSSVLVASLRLENLSIEGADLAIRRDAAGKLY 159 L N+ + G LS+ RV+ L W S+L + +L+ + + Sbjct: 68 LEAHNIHAALKDG-GELSIKRVTLALDVWQSLLHMRWQFRDLTFWQLN-----------F 115 Query: 160 VAGIPVPAGGDGSNL------DWLLSQRE-IVIRHSKLRWDDELRQAPELVLEDVNLVLH 212 P+ + DG + D L Q + +R S++ + Q EL + + + Sbjct: 116 RTNTPLQSS-DGEGIETSRLSDLFLRQFDHFDLRDSQISFLTLSGQRAELAIPQLTWL-- 172 Query: 213 NRWLRHR----LSLRAIPPQDMAAPLDVRADFSHPAFARSSDIARWKGLLYADLRNTELS 268 N RHR +SL ++ Q + VR D R D G ++ + ++ Sbjct: 173 NGKERHRAEGEVSLSSLTGQH--GVMQVRMDL------RDDDGLLNNGRVWLQADDIDVK 224 Query: 269 VWRA-WFDYPIAINSGRGSVRAWLTLDHAKVANFTADLGLTDFNARL--SRQLEPLSLKR 325 W W +A+ + R S+ W+TL ++A D+ L A LS+ Sbjct: 225 PWLGKWMQDNVALQTARFSLEGWMTLSKGEIAG--GDVWLKQGGASWLGDNTTHTLSVDN 282 Query: 326 VNGRISASETLGPNAEDGVPTFGANGHQVTLTDFSIETPDGFVLPPTSIAESYEPATPLK 385 + +IS + G Q + D I T DG P ++ ++ P + Sbjct: 283 LTAQISREQP---------------GWQFYIPDTRI-TLDGKPWPSGALTVAWLPQQDVG 326 Query: 386 AERTS------VKATYLNLQTLSQLATRLPLAPSQRKLLDDLAPRGELHDFTVQWQGTYP 439 E + ++A+ L L L L PLA +L GE+ WQ T P Sbjct: 327 GENHTRSDELRIRASNLELAGLEALR---PLAAKLSPVL------GEI------WQATQP 371 Query: 440 ELSSYRVNGRFKGLGLK-GLPAHVEPRKNAAQQ--ARAQWAAFPGFSNLSGEIDASEKGG 496 +G+ L L L A + R A+ + A QW PG + SG + S + G Sbjct: 372 -------SGKIATLALDIPLQATEKTRFQASWENLAWKQWKLLPGAEHFSGTLAGSVEDG 424 Query: 497 SVKVDAQQLAFELPTDLFRESSLPFDSLKLQARWQYLKDQT-LQVDLDQMQFAQPGVAGS 555 +KV QQ T +FR P + A +LK++ Q+D + V Sbjct: 425 QMKVAMQQAKMPYET-VFRA---PLEIENGVATLSWLKNENGFQLDGRDIDVKAKAVHAR 480 Query: 556 LSGQHLLPLQGRSAGSVDLHGELTSFDVKAIRRYLPQH-MSEPLHRWLTEGLLAGNLKEV 614 ++L P + + +++ D RY P++ M + L +L+ + G Sbjct: 481 GGFRYLQPTGDEPW--LGILAGISTDDGSQAWRYFPENLMGKALVDYLSGAIQGGEADNA 538 Query: 615 QFKLKGALADFPFHTTKPGEQPKGVFQLAGEFEGLKLNYTPGHVGRDGKEPEWPLLEEGR 674 G FP+ + G+FE L P +P+WP L+ Sbjct: 539 TLVYGGNPHLFPYKHNE------------GQFEVL----VPLRNATFAFQPDWPALKNLN 582 Query: 675 GRISVDRTRLEIKADSARTLGARLGPVTARVADVDSHDAVLEIDGVANGPMPAFLQYVNQ 734 + L +++DS G + + A + D L ID NGP A Y ++ Sbjct: 583 IELDFLNDGLWMRSDSVDLGGVKASKLAAAIPDYSKEK--LLIDADINGPGKAVGPYFDE 640 Query: 735 SPVARWTGNVMEHSTATGEARLDLKFQMPLHHAIDTRAQGAFNFANNDVDLLPELPPIYR 794 +P+ G+ + G+ L +PL T A+G + NN + + P + Sbjct: 641 TPLKDSLGSTLAELQLDGDVNARLHLDIPLDGEQVT-AEGDVSLRNNSLFIKPLNSTLKN 699 Query: 795 TSGKVEFNERGFTLNGVRGQFLGDNLAISGGTQKDGSS-QVRLDGAINIENLRKQYPEPS 853 +GK F + + L + T + + QV ++ N + R P Sbjct: 700 LNGKFSFVNGALKSGPLTANWFNQPLNLDFSTTEGAKAYQVAVNLNGNWQPTRMGVLPPQ 759 Query: 854 LQRLLARFSGGTRYSATVLVR-QHQPEVTVESSLAG----LGVDLPVPLRKGVQDSLPMR 908 L L SG ++ V + + + T L G + LP PL K +++P+ Sbjct: 760 LNDAL---SGSVTWNGKVGIDLPYHADTTYHIELNGDLRNVSSHLPSPLNKPAGEAIPVN 816 Query: 909 FDLLPLASSDPLIEREEMRVSLGS--NVASRYV-RERVAAKGNEWRVTSGGIGWNQPAPT 965 +D ++ + S GS + SR++ +++ W S I P Sbjct: 817 I------QADGNLKSFALTGSAGSKNHFNSRWLLNQKLTLDRAIWTTDSRTI-----PPL 865 Query: 966 PAS-GLKLALATDSLDADAWLALKKDLAGKDAAAAGNGAAAGNRLGNSDVTQYLEPDSVS 1024 PA G++L L +LD WLAL + A + +++ P V+ Sbjct: 866 PAQQGVELNLP--ALDGAQWLALFQKGAADNVSSSAE-----------------FPQRVT 906 Query: 1025 ARVGELNLMGKKLNKLILEAAHRRNAWQINLESQQAAGTVTWDEPGSASGAGKVTARLSS 1084 R L+L G++ N L + +A N +I + ++ T+ K Sbjct: 907 LRTPALSLGGQQWNNLSVVSAPSLNGTKIEAQGREVNATLLMRNHAPWLANIKYLYYNPG 966 Query: 1085 LVIPKSSPTADAAPPASADKTDDNLQMPALDIRAEQFELGGKKLGRLELDASNILTSVGR 1144 + +S +P ASA+ T P L +R E+ L G+K GR++ D G Sbjct: 967 VAKTHASSPTPTSPLASAN-TISFRGWPDLQLRCEECWLWGQKYGRIDGD----FAIKGN 1021 Query: 1145 EWRISRLLLANPDAQFRAAGNWLTFGSNHTSNFTYALDIEDAGKLLERFGYPGTIRGGRG 1204 ++ L+ A+ +A G W+ N ++ +L + FG I+ Sbjct: 1022 TLTLANGLIDTGFARLKANGEWVNAPGNERTSLKGSLHGSNLDTAAGFFGISTPIQNASF 1081 Query: 1205 KLDGDLSWKAPPYAMDMATLAGQVHMDVHSGQFLKVDPG-AAKLLGVLNLQALPRRLTLD 1263 +D DL W+ PP+ D ATL G + + G+F + G A +LL +L+ AL R+L D Sbjct: 1082 NVDYDLHWRNPPWQPDEATLNGILRTRLGKGEFTDLSSGHAGQLLRLLSFDALLRKLRFD 1141 Query: 1264 FRDVFSEGFAFDTVAGTASIAKGIASTDNLKMAGVTASVLMSGSADIARETQDLHVVVIP 1323 FRD FSEGF FD++ TA I G+ TD+ + G+ A + M GS D+ R D+ VV P Sbjct: 1142 FRDTFSEGFYFDSIHSTAWIKDGVLHTDDTLVDGLEADIAMKGSVDLVRRRLDMEAVVAP 1201 Query: 1324 EINLGTASVVAMAVNPVVGVSTLLAQLFLRNPVMKSLSFEYKVTGP-WSDPIVVKQGQVS 1382 EI+ A AVNP+VG + A KV GP WS +++ Sbjct: 1202 EISATVGVAAAFAVNPIVGAAVFAAS---------------KVLGPLWSKVSILRYRITG 1246 Query: 1383 PVDAERAREVLQK 1395 PVDA + EVL++ Sbjct: 1247 PVDAPQINEVLRQ 1259 >XF1126 [S] COG3164 Predicted membrane protein Xfa Xylella fastidiosa 9a5c Length = 1251 Score = 209 bits (533), Expect = 3e-53, Method: Compositional matrix adjust. Identities = 327/1360 (24%), Positives = 545/1360 (40%), Gaps = 186/1360 (13%) Query: 62 VLPEVGHYKPRIEALISHQLGRTVSIETIDASWSGLRPQLSLTNLTVHDQQGEAALSLPR 121 +LP V + ++ +S + G+ V +T++ SW+ P L L + + Q +++ Sbjct: 7 LLPVVERHPQQVADWLSVRTGQPVRFDTLNTSWTQRGPLLRLQGVRIGPQ---GRMAIGE 63 Query: 122 VSTTLSWSSVLVASLRLENLSIEGADLAIRRDAAGKLYVAGIPVPAGGDGSNLDWLLSQR 181 V ++ + L+ L L + G L + RD+AG+ V G+P GGD L+ L Sbjct: 64 VEVLVAMYTGLLPGHSLIELRLRGMALTVHRDSAGRWSVYGLPRDVGGD--PLEVLRRLG 121 Query: 182 EIVIRHSKLRWDDELRQAPELVLEDVNLVLHNRWLRHRLSLRAIPPQDMAAPLDVRADFS 241 E+ + +L D L +NL + R R + AP+ DF Sbjct: 122 ELQVIGGRLSVDAP-SSGVSTTLSQINLRVRVAGDRLRAGVHGWL-DSARAPVTGVVDF- 178 Query: 242 HPAFARSSDIARWKGLLYADLRNTELSVWR---AWFDYPIAINSGRGSVRAWLTLD--HA 296 D G +Y + +L+ W A + + G G VRAW L H Sbjct: 179 --------DRVSGDGDVYVETLPNQLASWSSLLAGVMRGVHLRDGAGHVRAWAQLHRHHV 230 Query: 297 KVANFTADLGLTDFNA-RLSRQL--------EPLSLKRVNGRISASETLGPNAEDGVPTF 347 + DL F RL+ Q + +L R + + P Sbjct: 231 EQVTVQGDLQGVRFEGVRLAGQTVVPRVFWPQLQALVRWQRQGDGWRVVAPRLR-----M 285 Query: 348 GANGHQVTLTDFSIETPDGFVLPPTSIAESYEPATPLKAERTSVKATYLNLQTLSQLATR 407 G +G ++ DG V+ S Y + P + +V A LA Sbjct: 286 GESGR--------LQKLDGLVVEGGSF---YTVSAPEAVDAGAVMAV---------LALG 325 Query: 408 LPLAPSQRKLLDDLAPRGELHDFTVQWQGTYPELSSYRVNGRFKGLGLKGLPAHVEPRKN 467 LAP R L P+ + VQ Q V GR + LG LP Sbjct: 326 DWLAPDLRTWLLRARPQLRVAGLHVQSQAD----GRLWVAGRVEQLGF--LPV------- 372 Query: 468 AAQQARAQWAAFPGFSNLSGEIDASEKGGSVKVD-AQQLAFELPTDLFRESSLPFDSLKL 526 PG S + G ++ +G + +D A + F+ P+ R + + Sbjct: 373 ---------VDAPGLSGVRGTLEGDAQGAVLTLDSAASVHFDWPSGFGRRHEIHLAGRIV 423 Query: 527 QARWQYLKDQTLQVDLDQMQFAQPGVA--GSL--SGQHLLPLQGRSAGSVDLHGELTSFD 582 W+ + ++Q G + G L G +LP + L +L Sbjct: 424 G--WRQGDGWKVATPALRVQAGDYGASLRGGLWFEGHGMLP-------RISLAVQLDDVA 474 Query: 583 VKAIRRY-LPQHMSEPLHRWLTEGLLAGNLKEVQFKLKGALADFPFHTTKPGEQPKGVFQ 641 V +R+ + MS L WL L+ G+ ++G L D+PF+ G F+ Sbjct: 475 VPVAKRFWVRSKMSRELIDWLNAALVNGSTSGGFALIEGELKDWPFNNHD------GYFE 528 Query: 642 LAGEFEGLKLNYTPGHVGRDGKEPEWPLLEEGRGRISVDRTRLEIKADSARTLGARLGPV 701 AG G + + + EWP+LE+ I+ IK G + Sbjct: 529 AAGRIHGGVMRF----------QSEWPVLEKLDADIAFIGNGFSIKG-RGELAGVPQVQL 577 Query: 702 TARVADVDSHDAVLEIDGVANGPMPAFLQYVNQSPVARWTGNVMEHSTATGEARLDLKFQ 761 A + D + D L + L + +SP+ + + ++ +A+G A + Q Sbjct: 578 EAGIEDFEKGD--LYVRAHVQSDATRLLGLLRRSPLHQHDADTLDSVSASGPASVSFDMQ 635 Query: 762 MPLHHAIDTRAQGA-FNFANNDVDLLPELPPIYR--------TSGKVEFNERGFTLNG-- 810 +PL H QGA + +V L + I+R G V ++ GF+ G Sbjct: 636 LPLRHE-----QGADYGHFGGEVSL-ENVNFIHRRWNLAFENVRGPVRYSSDGFSAEGLH 689 Query: 811 VRGQFLGDNLAISGGTQKDGSSQV---RLDGAINIENLRKQYPEPSLQRLLARFSGGTRY 867 V Q L L++ G D +Q+ RL ++N+++L + P+ + L +G +++ Sbjct: 690 VLHQGLEGRLSVRVGDAVDDPAQIFQARLLASVNVKSLLRHAPQ--MDWLRPYVNGISQW 747 Query: 868 SATVLVRQHQPE-------VTVESSLAGLGVDLPVPLRKGVQDSLPMRFDL-LPLASSDP 919 + + + P+ +T++S L G ++LPVPL KG LP D+ LP+ Sbjct: 748 RIGIDLAKGAPDAHRVFGHLTLDSDLVGTALNLPVPLDKGSGRVLPAHIDVALPM----- 802 Query: 920 LIEREEMRVSLGSNVASRYVRERVAAKGNEWRVTSGGIGWNQPAPTPASGLKLALATDSL 979 E+ ++ ++LG VA+R VR R +G RV G + AP GL + + SL Sbjct: 803 --EQGDIALALGKLVAAR-VRHR-EGEGIGVRVVMGSDN-VRDAPLE-HGLVVIGHSTSL 856 Query: 980 DADAWLALKKDLAGKDAAAAGNGAAAGNRLGNSDVTQYLEPDSVSARVGELNLMGKKL-- 1037 DA W+ L + G S V+ L + +V L L+G Sbjct: 857 DAIDWMRLVR--------------------GGSAVSSDLPLRLIDLQVDSLLLLGGMFPN 896 Query: 1038 NKLILEAAHRRNAWQINLESQQAAGTVTWDEPGSASGAGKVTARLSSLVIPKS-SPTADA 1096 + L H+ A + ++ +G + E S G VT L L + +P+ Sbjct: 897 TRFQLRPVHQGVA--VAVDGPALSGQLNVPE----SIDGTVTGSLGVLHWQAAQAPSVKV 950 Query: 1097 APPASADKTD-DNLQMPALDIRAEQFELGGKKLGRLELDASNILTSVGREWRISRLLLAN 1155 + + D D +P+L E + G K GR+EL ++ + ++ +L + Sbjct: 951 SGSVQSAMVDVDPASIPSLAFEVEDAKFGQVKFGRMELRTRHMSDGM----QVDQLQTNS 1006 Query: 1156 PDAQFRAAGNWLTFGSNHTSNFTYALDIEDAGKLLERFGYPGTIRGGRGKLDGDLSWKAP 1215 P + W G + + +D D G+L + GY +RGG G++ W P Sbjct: 1007 PSQRLSMFATWRGKGEAASIRLSARVDSRDLGELAQAIGYGEQLRGGEGQIQLSAGWNGP 1066 Query: 1216 PYAMDMATLAGQVHMDVHSGQFLKVDPGAAKLLGVLNLQALPRRLTLDFRDVFSEGFAFD 1275 P +A+L+G + + +GQ L++ PGA ++LG+L++ LPRRL LDFRD+FS+G AF+ Sbjct: 1067 PVGFQLASLSGDLKVTARNGQLLELKPGAGRVLGLLSVTQLPRRLMLDFRDLFSKGLAFN 1126 Query: 1276 TVAGTASIAKGIASTDNLKMAGVTASVLMSGSADIARETQDLHVVVIPEINLGTASVVAM 1335 G G A D LK+ G ++ + G +D++ +T D V V P+ V A+ Sbjct: 1127 RFYGEVHFGDGQARADGLKIEGPAVNIAIRGQSDLSTQTFDQIVDVNPKSGNLLTVVGAV 1186 Query: 1336 AVNPVVGVSTLLAQLFLRNPVMKSLSFEYKVTGPWSDPIV 1375 A PV A + L P+ + Y V+GPW+DP V Sbjct: 1187 AGGPVGAAVGAAANMVLGKPLGAIGAKTYHVSGPWNDPKV 1226 >VC0420 [S] COG3164 Predicted membrane protein Vch Vibrio cholerae Length = 1291 Score = 197 bits (501), Expect = 2e-49, Method: Compositional matrix adjust. Identities = 259/1120 (23%), Positives = 452/1120 (40%), Gaps = 124/1120 (11%) Query: 280 INSGRGSVRAWLTLDHAKVANFTADLGLTDFNARLSRQLEPLSLKRVNGRISASETLGPN 339 I G+ S+ AW TL+H + + G +F +P L NG + L Sbjct: 251 IQKGQVSLNAWATLEHNQPKD-----GYVEF--------KPSELVWQNGEQTHELLLESG 297 Query: 340 AEDGVPTFGANGHQVTLTDFSIETPDGFVLPPTSIAESYEPATPLKAERTSVKATYLNLQ 399 + PT G QV + + D + P +A ++P + + + LN++ Sbjct: 298 IVELKPT--EKGWQVNAHSLRLRSDDE-LWPLLDVAMDWQP------DEWRLNLSQLNIE 348 Query: 400 TLSQLATRLPLAPSQRKLLDDLAPRGELHDFTVQWQGTYPELSSYRVNGRFKGLGLKGLP 459 L LA +P + + L L P+G L D + T L S R + G+ Sbjct: 349 NLLPLAKLIPESQTLNHWLTTLKPKGTLEDVRIAKGAT---LESLRYSASLIDGGI---- 401 Query: 460 AHVEPRKNAAQQARAQWAAFPGFSNLSGEIDASEKGGSVKVDAQQLAFELPTDLFRESSL 519 AQW P + L +I S +K A + LP ++ L Sbjct: 402 --------------AQWELLPQVNALQAQIQGSPSKALIK--ASMVDDVLPYGEVFQAPL 445 Query: 520 PFDSLKLQARWQYLKDQTLQVDLDQMQFAQPGVAGSLSGQHLLPLQGRSAGSVDLHGELT 579 + WQ + + D++ A P + G L ++ + + E Sbjct: 446 NIRQGAVNLVWQQ-EQYGWSLWSDKVTVATPDLQAL--GAFRLDFPDDASPFLSFYAEAD 502 Query: 580 SFDVKAIRRYLPQ-HMSEPLHRWLTEGLLAGNLKEVQFKLKGALADFPFHTTKPGEQPKG 638 F+ RYLP + L +L+ + AG + + GAL FP+ G Sbjct: 503 LFNAGETWRYLPTLALGRELTDYLSTAIQAGQVNTAKLIWYGALDQFPYRMHN------G 556 Query: 639 VFQLAGEFEGLKLNYTPGHVGRDGKEPEWPLLEEGRGRISVDRTRLEIKADSARTLGARL 698 VFQ + GLK + + WP + + + + + + + + SA + Sbjct: 557 VFQ---AWVGLK-------EAKFAFDTAWPPITDLQLDLLFENDAMYLDSRSATLMEVSA 606 Query: 699 GPVTARVADVDSHDAVLEIDGVANGPM-PAFLQYVNQSPVARWTGNVMEHSTATGEARLD 757 +T R+ ++ + +EI+ VA+ A Y+ +P+ G + G R + Sbjct: 607 ERITGRIPEL-AELGHIEIEAVASAQQGNAIRNYMMATPLVDSVGAALTTIQVKGPVRSE 665 Query: 758 LKFQMPLHHAIDTRAQGAFNFANNDVDLLPELPPIYRTS--GKVEFNERGFTLNGVRGQF 815 + +P H + RA G +NN VD+ + PP+ TS GK+EF+ + G+ + Sbjct: 666 FQLNIPFHSGAEPRAWGFAELSNNAVDI--DTPPMSLTSVSGKIEFDNDRVSAAGLDARL 723 Query: 816 LGDNLAI--SGGTQKDGSSQVRLDGAINIENLRKQYPEPSL----QRLLARFSGGTRYSA 869 L ++I G K G A+ I+ + +P + +R L+R G + A Sbjct: 724 LKQPVSIDFKGEDAKRGY-------AVGIDMVGDWEVKPLIPFVGERWLSRVKGHAPWQA 776 Query: 870 TVLVRQHQPEVTVE----SSLAGLGVDLPVPLRKGVQDSLPMRFDLLPLASSDPLIEREE 925 +V ++ + T + + L GL P PL+K +L ++ L AS + +E Sbjct: 777 SVDIQLNDVGFTYQLDGKADLRGLESRYPFPLKK----ALKVKGQALLQASGN----QEM 828 Query: 926 MRVSLGSNVASRYVRERVAAKGNEWRVTSGGIGWNQPAPTPASGLKLALATDSLDADAWL 985 + L A + K + T+ +G +P G + L + + + D WL Sbjct: 829 VSARLQLPQAKYQAEIDLTPKVPVLKATNLVLGQGSFKISPVVGHHVQLRSQAFNLDDWL 888 Query: 986 ALKKDLAGKDAAAAGNGAAAGNRLGNSDVTQYLEPDSVSARVGELNLMGKKLNKLILEAA 1045 ++ L K A + ++L + + + P+ V A V EL G + + L A Sbjct: 889 SI---LNEKPAPKSRK-----SKLASLNTPAFPMPERVDAAVKELTFAGLDWHDVDLNAR 940 Query: 1046 HRRNAWQINLESQQAAGTVTWDEPGSASGAGKVTARLSSLVIPKSSPTADAA-------- 1097 + W +NL+SQ+ G + EP S A RL L +P+ +A Sbjct: 941 RKDLGWLLNLDSQEIKGQANYIEPYDLSIA---LERLH-LFLPQLEAGEEALLVDLDRQK 996 Query: 1098 -PPASADKTDDNLQMPALDIRAEQFELGGKKLGRLELDASNILTSVGREWRISRLLLANP 1156 P + + MP L + + F L G K+G+ +D G + + Sbjct: 997 LPLITDFDRKFHQWMPNLTLTIKDFWLQGYKIGQANVD----FQRQGDTLLWKSIDFTSG 1052 Query: 1157 DAQFRAAGNWLTFGSNHTSNFTYALDIEDAGKLLERFGYPGTIRGGRGKLDGDLSWKAPP 1216 Q G W + + + ++ L+ RFG I+ ++ W P Sbjct: 1053 TNQLHVNGTWTLTDTQSRTQMNLDMKGDNNSDLMARFGINSGIQRAPFEITASTQWDGAP 1112 Query: 1217 YAMDMATLAGQVHMDVHSGQFLKVDPGAAKLLGVLNLQALPRRLTLDFRDVFSEGFAFDT 1276 ++M + TL G+V + G V GAA+LLG+ +L ++ R++ LDF DVF +G AFD+ Sbjct: 1113 WSMQVNTLQGKVDTKLGKGVISDVS-GAARLLGLFSLDSIIRKMQLDFSDVFDKGMAFDS 1171 Query: 1277 VAGTASIAKGIASTDNLKMAGVTASVLMSGSADIARETQDLHVVVIPEINLGTASVVAMA 1336 ++G+ +++GI T+N+KM V + + G AD+ T D V +P+I G + A A Sbjct: 1172 ISGSGELSQGIFVTNNIKMDAVAGEMTIKGLADLNTRTVDAEVNFVPDITSGIPVLTAFA 1231 Query: 1337 VNPVVGVSTLLAQLFLRNPVMKSLS-FEYKVTGPWSDPIV 1375 V P + +LA + +PV++ + Y+V GP P V Sbjct: 1232 VTPQTAL-YVLAITTVISPVVEVFTQVNYEVKGPLDSPTV 1270 >Z4604 [S] COG3164 Predicted membrane protein EcZ Escherichia coli O157:H7 EDL933 Length = 1266 Score = 196 bits (499), Expect = 2e-49, Method: Compositional matrix adjust. Identities = 317/1376 (23%), Positives = 533/1376 (38%), Gaps = 174/1376 (12%) Query: 43 LLLAAYFVFCALFLV--LRYAVLPEVGHYKPRIEALISHQLGRTVSIETIDASWSGLRPQ 100 LL A V A LV LR A LP + ++P I I G V + ASW P Sbjct: 9 LLTGAALVVIAALLVSGLRIA-LPHLDAWRPEILNKIESATGMPVEASQLSASWQNFGPT 67 Query: 101 LSLTNLTVHDQQGEAALSLPRVSTTLS-WSSVLVASLRLENLSIEGADLAIRRDAAGKLY 159 L ++ + G S+ RV+ L W S+L + +L+ L R + Sbjct: 68 LEAHDIRAELKDG-GEFSVKRVTLALDVWQSLLHMRWQFRDLTF--WQLRFRTNT----- 119 Query: 160 VAGIPVPAGGDGSNL------DWLLSQRE-IVIRHSKLRWDDELRQAPELVLEDVNLVLH 212 P+ +GG +L D L Q + +R S++ + Q EL + + + Sbjct: 120 ----PITSGGSDDSLEASHISDLFLRQFDHFDLRDSEVSFLTPSGQRAELAIPQLTWLND 175 Query: 213 NRWLRHR----LSLRAIPPQDMAAPLDVRADFSHPAFARSSDIARWKGLLYADLRNTELS 268 R RHR +SL ++ Q + VR D R + G ++ + +L Sbjct: 176 PR--RHRAEGLVSLSSLTGQH--GVMQVRMDL------RDDEGLLSNGRVWLQADDIDLK 225 Query: 269 VWRA-WFDYPIAINSGRGSVRAWLTLDHAKVANFTADLGLTDFNARL--SRQLEPLSLKR 325 W W IA+ + + S+ W+T+D V D+ L A ++ LS+ Sbjct: 226 PWLGKWMQDNIALETAQFSLEGWMTIDKGDVTG--GDVWLKQGGASWLGEKETHTLSVDN 283 Query: 326 VNGRISASETLGPNAEDGVPTFGANGHQVTLTDFSIETPDGFVLPPTSIAESYEPATPL- 384 + I+ G Q ++ D I T DG P ++ ++ P + Sbjct: 284 LTAHITRENP---------------GWQFSIPDTRI-TMDGKPWPSGALTLAWIPEQDVG 327 Query: 385 -----KAERTSVKATYLNLQTLSQLATRLPLAPSQRKLLDDLAPRGELHDFTVQWQGTYP 439 +++ ++A+ L L L + PLA L D+ W+ T P Sbjct: 328 GKDNKRSDELRIRASNLELAGLEGIR---PLAAKLSPALGDV------------WRSTQP 372 Query: 440 ELSSYRVNGRFKGLGLK-GLPAHVEPRKNAAQQ--ARAQWAAFPGFSNLSGEIDASEKGG 496 +G+ L L L A + R A+ A QW PG + SG + S + G Sbjct: 373 -------SGKINTLALDIPLQAADKTRFQASWSDLAWKQWKLLPGAEHFSGTLSGSVENG 425 Query: 497 SVKVDAQQLAFELPTDLFRESSLPFDSLKLQARWQYLK-DQTLQVDLDQMQFAQPGVAGS 555 + +Q T +FR P + QA +L D+ Q+D + V Sbjct: 426 LLTASMKQAKMPYET-VFRA---PLEIADGQATISWLNNDKGFQLDGRNIDVKAKAVHAR 481 Query: 556 LSGQHLLPLQGRSAGSVDLHGELTSFDVKAIRRYLPQH-MSEPLHRWLTEGLLAGNLKEV 614 ++L P + + +++ D RY P++ M + L +L+ + G Sbjct: 482 GGFRYLQPANDEPW--LGILAGISTDDGSQAWRYFPENLMGKDLVDYLSGAIQGGEADNA 539 Query: 615 QFKLKGALADFPFHTTKPGEQPKGVFQLAGEFEGLKLNYTPGHVGRDGKEPEWPLLEEGR 674 G FP+ + G+FE L P + +P+WP L Sbjct: 540 TLVYGGNPQLFPYKHNE------------GQFEVL----VPLRNAKFAFQPDWPALTNLG 583 Query: 675 GRISVDRTRLEIKADSARTLGARLGPVTARVADVDSHDAVLEIDGVANGPMPAFLQYVNQ 734 + L +K D G R +TA + D L ID GP A Y ++ Sbjct: 584 IELDFINDGLWMKTDGVNLGGVRASNLTAVIPDYSKEK--LLIDADIKGPGKAVGPYFDE 641 Query: 735 SPVARWTGNVMEHSTATGEARLDLKFQMPLHHAIDTRAQGAFNFANNDVDLLPELPPIYR 794 +P+ G ++ G+ L +PL+ + T A+G NN + + P + Sbjct: 642 TPLKDSLGATLQELQLDGDVNARLHLDIPLNGELVT-AKGEVTLRNNSLFIKPLDSTLKN 700 Query: 795 TSGKVEFNERGFTLNGVRGQFLGDNLAISGGTQKDGSSQVRLDGAINIENLRKQYPEPSL 854 SGK F + + L + T K+G+ ++ A+N+ + L Sbjct: 701 LSGKFSFINGDLQSEPLTASWFNQPLNVDFST-KEGAKAYQV--AVNLNGNWQPAKTGVL 757 Query: 855 QRLLAR-FSGGTRYSATV-LVRQHQPEVTVESSLAG----LGVDLPVPLRKGVQDSLPMR 908 + SG + V +V + T L G + LP PL K + LP+ Sbjct: 758 PAAVNEALSGSVAWDGKVGIVLPYHAGATYNVELNGDLKNVSSHLPSPLAKPAGEPLPVN 817 Query: 909 FDLLPLASSDPLIEREEMRVSLGSN--VASRYVR-ERVAAKGNEWRVTSGGIGWNQPAPT 965 + D + E+ G++ SR++ +++ W S + P Sbjct: 818 VKV------DGNLNSFELTGQAGADNHFNSRWLLGQKLTLDRAIWAADSKTL----PPLP 867 Query: 966 PASGLKLALATDSLDADAWLALKKDLAGKDAAAAGNGAAAGNRLGNSDVTQYLEPDSVSA 1025 SG++L + ++ WLAL + K AA + GAA+ P ++ Sbjct: 868 EQSGVELNMP--PMNGAEWLALFQ----KGAAESVGGAAS-------------FPQHITL 908 Query: 1026 RVGELNLMGKKLNKLILEAAHRRNAWQINLESQQAAGTVTWDEPGSASGAGKVTARLSSL 1085 R L+L ++ N L + + N Q+ + ++ T+ + A + L Sbjct: 909 RTPMLSLGNQQWNNLSIVSQPTANGTQVEAQGREINATL------AMRNNAPWLANIKYL 962 Query: 1086 VI-PKSSPTADAAPPASADKTDDNLQMPALD---IRAEQFELGGKKLGRLELDASNILTS 1141 P + T + P+S T + + IR + G+K GR++ D +T Sbjct: 963 YYNPSVAKTRGDSTPSSPFPTTERINFRGWSDAQIRCAECWFWGQKFGRIDSD----ITI 1018 Query: 1142 VGREWRISRLLLANPDAQFRAAGNWLTFGSNHTSNFTYALDIEDAGKLLERFGYPGTIRG 1201 G ++ L+ ++ A G W+ N ++ L + E FG IR Sbjct: 1019 SGNTLTLTNGLIDTGFSRLTADGEWINNPGNERTSLKGKLRGQKIDAAAEFFGVTTPIRQ 1078 Query: 1202 GRGKLDGDLSWKAPPYAMDMATLAGQVHMDVHSGQFLKVDPG-AAKLLGVLNLQALPRRL 1260 +D DL W+ P+ D ATL G +H + G+ +++ G A +LL +L++ AL R+L Sbjct: 1079 SSFNVDYDLHWRKAPWQPDEATLNGIIHTQLGKGEITEINTGHAGQLLRLLSVDALMRKL 1138 Query: 1261 TLDFRDVFSEGFAFDTVAGTASIAKGIASTDNLKMAGVTASVLMSGSADIARETQDLHVV 1320 DFRD F EGF FD++ TA I G+ TD+ + G+ A + M GS ++ R ++ V Sbjct: 1139 RFDFRDTFGEGFYFDSIRSTAWIKDGVMHTDDTLVDGLEADIAMKGSVNLVRRDLNMEAV 1198 Query: 1321 VIPEINLGTASVVAMAVNPVVGVSTLLAQLFLRNPVMKSLS-FEYKVTGPWSDPIV 1375 V PEI+ A AVNP+VG + A L P+ +S Y ++GP DP + Sbjct: 1199 VAPEISATVGVAAAFAVNPIVGAAVFAASKVL-GPLWSKVSILRYHISGPLDDPQI 1253