BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0007.0153.p (229 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value mlr7061 [R] COG1744 Uncharacterized ABC-type transport system, p... 288 8e-78 AF0890 [R] COG1744 Uncharacterized ABC-type transport system, pe... 173 4e-43 SMa1507 [R] COG1744 Uncharacterized ABC-type transport system, p... 142 7e-34 PA0146 [R] COG1744 Uncharacterized ABC-type transport system, pe... 137 2e-32 RSc2177 [R] COG1744 Uncharacterized ABC-type transport system, p... 130 2e-30 >mlr7061 [R] COG1744 Uncharacterized ABC-type transport system, periplasmic component/surface lipoprotein Mlo Mesorhizobium loti Length = 370 Score = 288 bits (736), Expect = 8e-78, Method: Compositional matrix adjust. Identities = 142/235 (60%), Positives = 167/235 (71%), Gaps = 7/235 (2%) Query: 1 MNVGSFFGYIEECEYL-------SSKSKKLAFIAAKPIPQVLRNINAFTLGAQSVDPSIT 53 MN GS+FGYI +YL +SKSKKL F+AAKPIPQVL NIN+F LGA+SVDP+IT Sbjct: 134 MNAGSYFGYIGMGQYLNGVVASHTSKSKKLGFVAAKPIPQVLLNINSFLLGARSVDPAIT 193 Query: 54 CHVIFTGDWSLPVKEAEAANSLIDQGCDVITCHVDGPKVIVETAEKRGIMTTGYHASQAS 113 C VIFTG+WSL VKEAEA N+L+DQG DVITCHVD PKV+VETA RG GYHA+Q+ Sbjct: 194 CQVIFTGEWSLAVKEAEATNALVDQGADVITCHVDSPKVVVETAAGRGAFICGYHANQSP 253 Query: 114 LAPKGYLTGAEWNWATPYTEIVKATLEGKPMINFLRGGLKDDFVKMSPYGAAVSAPAKKK 173 LAP+ YLTGAEWNWA Y V + G P+ NF RGGL D FVKMSP G AV A+K+ Sbjct: 254 LAPEKYLTGAEWNWAKVYKMFVDDLVAGTPLPNFTRGGLADGFVKMSPLGPAVGEAARKQ 313 Query: 174 ADEIKAQMLAGKFQIFKGPIKDNKGNTVIPAGTTQVQTDVALEKMNYLVAGVVGQ 228 D A+M+ G F + KGP+K NKG V G V+T + LE M+YLV GVVG Sbjct: 314 FDATLAEMMKGGFSVIKGPLKSNKGAVVATEGQAFVETAIELESMDYLVEGVVGS 368 >AF0890 [R] COG1744 Uncharacterized ABC-type transport system, periplasmic component/surface lipoprotein Afu Archaeoglobus fulgidus Length = 397 Score = 173 bits (438), Expect = 4e-43, Method: Compositional matrix adjust. Identities = 93/238 (39%), Positives = 136/238 (57%), Gaps = 13/238 (5%) Query: 2 NVGSFFGYIEECEYLS-------SKSKKLAFIAAKPIPQVLRNINAFTLGAQSVDPSITC 54 NVG++FG + + YLS +K+ K+ ++AA PIP+V+R INAF LG + V+P Sbjct: 158 NVGTYFGRMYQARYLSGLVAGAMTKTNKIGYVAAVPIPEVIRGINAFALGVKKVNPDAKI 217 Query: 55 HVIFTGDWSLPVKEAEAANSLIDQGCDVITCHVDGPKVIVETAEKRGIMTTGYHASQASL 114 +V++TG W P KE EAA SLID+GCDVI H D P + AE+RG+ + GYH+ + Sbjct: 218 YVVWTGTWYDPAKEKEAALSLIDEGCDVIAQHQDSPAA-QQAAEERGVYSIGYHSDMSKF 276 Query: 115 APKGYLTGAEWNWATPYTEIVKATLEGKPMINFLRGGLKDDFVKMSPYGAAVSAPAKKKA 174 AP +LT A WNW+ Y+ +++ ++G + G+ V ++P V KK Sbjct: 277 APHAHLTSAVWNWSVIYSYVIEQVMQGTWKSEQIWWGIDKGVVGLTPLSDVVPEDVKKMV 336 Query: 175 DEIKAQMLAGKF---QIFKGPIKDNKGNTVIPAGTTQVQTDVALEKMNYLVAGVVGQV 229 +E K + L G+ F GPI D +GN V G +V TD L MN+ V VVG++ Sbjct: 337 EEEKQKYLNGEVPEQYPFVGPIYDQQGNLVKAEG--EVMTDKELLSMNFFVDNVVGEI 392 >SMa1507 [R] COG1744 Uncharacterized ABC-type transport system, periplasmic component/surface lipoprotein Sme Sinorhizobium meliloti Length = 364 Score = 142 bits (358), Expect = 7e-34, Method: Compositional matrix adjust. Identities = 83/235 (35%), Positives = 121/235 (51%), Gaps = 10/235 (4%) Query: 2 NVGSFFGYIEECEYLS-------SKSKKLAFIAAKPIPQVLRNINAFTLGAQSVDPSITC 54 N+G+F E +++ SKS K+ FI PIP ++ NA LGAQSV+P +TC Sbjct: 132 NLGTFEAKYYEGTFVAGAAGGHMSKSGKIGFIGGFPIPDIVGPANALLLGAQSVNPEVTC 191 Query: 55 HVIFTGDWSLPVKEAEAANSLIDQGCDVITCHVDGPKVIVETAEKRGIMTTGYHASQASL 114 + IF W P KE EAAN+L+ QGCDVI C + V+ A + G + GY + A Sbjct: 192 NAIFLNSWFDPGKEKEAANTLLSQGCDVI-CSMTDTATGVQVAGEGGAWSIGYASDMAKF 250 Query: 115 APKGYLTGAEWNWATPYTEIVKATLEGKPMINFLRGGLKDDFVKMSPYGAAVSAPAKKKA 174 LT +W++ Y K EG GL VKM+PY A+ A + K Sbjct: 251 GSGKQLTAFTLDWSSEYLRAAKGVAEGTWKAEARWDGLAAGVVKMAPYNEAIPADIQAKL 310 Query: 175 DEIKAQMLAGKFQIFKGPIKDNKGNTVIPAGTTQVQTDVALEKMNYLVAGVVGQV 229 +++A + AGK + G +KD GN + AG+ TD+ MN+ V G++G++ Sbjct: 311 KQLEADIAAGKIHPYAGELKDQDGNVKVAAGSVLSDTDI--RGMNWFVRGMIGKL 363 >PA0146 [R] COG1744 Uncharacterized ABC-type transport system, periplasmic component/surface lipoprotein Pae Pseudomonas aeruginosa Length = 365 Score = 137 bits (345), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 77/231 (33%), Positives = 116/231 (50%), Gaps = 10/231 (4%) Query: 2 NVGSFFGYIEECEYLS-------SKSKKLAFIAAKPIPQVLRNINAFTLGAQSVDPSITC 54 N+G++ E Y+ ++S K+ +IA+ PIP+V+R+INA L DP Sbjct: 132 NLGTYLSRSYEGRYVGGFLAAKMTRSHKIGYIASFPIPEVIRDINAIQLALDKYDPQAEL 191 Query: 55 HVIFTGDWSLPVKEAEAANSLIDQGCDVITCHVDGPKVIVETAEKRGIMTTGYHASQASL 114 V++ W P KEA+AAN+LIDQG DV+ H D P I + AE+RG+ GY + Sbjct: 192 KVMWVSTWFDPGKEADAANALIDQGVDVVFQHTDSPAPI-QAAERRGVYAVGYASDMQHF 250 Query: 115 APKGYLTGAEWNWATPYTEIVKATLEGKPMINFLRGGLKDDFVKMSPYGAAVSAPAKKKA 174 PK LT +W Y +A ++G GGL + V + + AP +++A Sbjct: 251 GPKTVLTSIVNDWGPHYIRSAQAVMDGTWKSEDFWGGLAESTVVLPLNQEVLPAPVREEA 310 Query: 175 DEIKAQMLAGKFQIFKGPIKDNKGNTVIPAGTTQVQTDVALEKMNYLVAGV 225 + + +G F F GPI+D G AG + + D+A MNY V G+ Sbjct: 311 GRLIESIRSGAFHPFTGPIRDQSGKERFAAGVSATKADLA--SMNYYVEGI 359 >RSc2177 [R] COG1744 Uncharacterized ABC-type transport system, periplasmic component/surface lipoprotein Rso Ralstonia solanacearum Length = 380 Score = 130 bits (327), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 75/212 (35%), Positives = 115/212 (54%), Gaps = 3/212 (1%) Query: 18 SKSKKLAFIAAKPIPQVLRNINAFTLGAQSVDPSITCHVIFTGDWSLPVKEAEAANSLID 77 SKS +L + + PIP+V+RNI+AFTLGA+SV+P T V++ W P KE EAA +LI Sbjct: 170 SKSGQLGVVGSVPIPEVIRNIDAFTLGARSVNPKATTRVVWVNKWFDPGKEREAATTLIG 229 Query: 78 QGCDVITCHVDGPKVIVETAEKRGIMTTGYHASQASLAPKGYLTGAEWNWATPYTEIVKA 137 QG DV+ + D V V+TA+++G G+ + K +L + NW YT++V Sbjct: 230 QGVDVLMQNTDSAAV-VQTAQEKGAYAIGWDSDMTKFGDKAHLAASMNNWGVYYTKVVGD 288 Query: 138 TLEGKPMINFLRGGLKDDFVKMSPYGAAVSAPAKKKADEIKAQMLAGKFQIFKGPIKDNK 197 L+ + GLK+ + + + V K + K ++ G I+KGP+KDN Sbjct: 289 VLDNQWKSGSTWWGLKEGAIDLGAFNPVVPQDVKALVETRKKGVIDGSAPIWKGPLKDNT 348 Query: 198 GNTVIPAGTTQVQTDVALEKMNYLVAGVVGQV 229 G V+PA +V D L + + V GV G++ Sbjct: 349 GREVLPA--DKVADDGFLHGIKFYVEGVEGKI 378