BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0007.0140.p         (72 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

RSc2463 [F] COG0756 dUTPase Rso Ralstonia solanacearum                110   6e-25
STM3731 [F] COG0756 dUTPase Sty Salmonella typhimurium LT2             97   1e-20
NMA1112 [F] COG0756 dUTPase NmA Neisseria meningitidis Z2491           95   3e-20
Zdut [F] COG0756 dUTPase EcZ Escherichia coli O157:H7 EDL933           93   2e-19
ECs4515 [F] COG0756 dUTPase Ecs Escherichia coli O157:H7               93   2e-19

>RSc2463 [F] COG0756 dUTPase Rso Ralstonia solanacearum
          Length = 148

 Score =  110 bits (276), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 51/64 (79%), Positives = 59/64 (92%)

Query: 4  IDIKILDPRMKDQLPAYATPGSAGLDLRACIDAPLTLAPGSTHLIPTGLAIHLADPNYAA 63
          +D++ILD R+ +QLP YATPGSAGLDLRAC+DAPLTL PGSTHLIPTG+AIHLADP YAA
Sbjct: 3  LDVQILDARLHEQLPQYATPGSAGLDLRACLDAPLTLEPGSTHLIPTGMAIHLADPGYAA 62

Query: 64 VILP 67
          +ILP
Sbjct: 63 LILP 66


>STM3731 [F] COG0756 dUTPase Sty Salmonella typhimurium LT2
          Length = 151

 Score = 96.7 bits (239), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 48/69 (69%), Positives = 57/69 (82%), Gaps = 2/69 (2%)

Query: 1  MKTIDIKILDPRMKDQ--LPAYATPGSAGLDLRACIDAPLTLAPGSTHLIPTGLAIHLAD 58
          MK ID+KILDPR+  Q  LP YAT GSAGLDLRAC+D  + LAPG+T L+PTGLAIH+AD
Sbjct: 1  MKKIDVKILDPRVGQQFPLPTYATSGSAGLDLRACLDDAVELAPGATTLVPTGLAIHIAD 60

Query: 59 PNYAAVILP 67
          P+ AAV+LP
Sbjct: 61 PSLAAVMLP 69


>NMA1112 [F] COG0756 dUTPase NmA Neisseria meningitidis Z2491
          Length = 150

 Score = 95.1 bits (235), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 42/64 (65%), Positives = 53/64 (82%)

Query: 4  IDIKILDPRMKDQLPAYATPGSAGLDLRACIDAPLTLAPGSTHLIPTGLAIHLADPNYAA 63
          +++K+LD RM D +P YAT GSAGLDLRAC+D  + L PG T L+PTGLAI+LADP+YAA
Sbjct: 5  VEMKVLDERMADVVPVYATKGSAGLDLRACLDEEVVLQPGETFLVPTGLAIYLADPSYAA 64

Query: 64 VILP 67
          V+LP
Sbjct: 65 VLLP 68


>Zdut [F] COG0756 dUTPase EcZ Escherichia coli O157:H7 EDL933
          Length = 151

 Score = 92.8 bits (229), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 46/69 (66%), Positives = 56/69 (81%), Gaps = 2/69 (2%)

Query: 1  MKTIDIKILDPRMKDQ--LPAYATPGSAGLDLRACIDAPLTLAPGSTHLIPTGLAIHLAD 58
          MK ID+KILDPR+  +  LP YAT GSAGLDLRAC+D  + LAPG T L+PTGLAIH+AD
Sbjct: 1  MKKIDVKILDPRVGKEFPLPTYATSGSAGLDLRACLDDAVELAPGDTTLVPTGLAIHIAD 60

Query: 59 PNYAAVILP 67
          P+ AA++LP
Sbjct: 61 PSLAAMMLP 69


>ECs4515 [F] COG0756 dUTPase Ecs Escherichia coli O157:H7
          Length = 151

 Score = 92.8 bits (229), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 46/69 (66%), Positives = 56/69 (81%), Gaps = 2/69 (2%)

Query: 1  MKTIDIKILDPRMKDQ--LPAYATPGSAGLDLRACIDAPLTLAPGSTHLIPTGLAIHLAD 58
          MK ID+KILDPR+  +  LP YAT GSAGLDLRAC+D  + LAPG T L+PTGLAIH+AD
Sbjct: 1  MKKIDVKILDPRVGKEFPLPTYATSGSAGLDLRACLDDAVELAPGDTTLVPTGLAIHIAD 60

Query: 59 PNYAAVILP 67
          P+ AA++LP
Sbjct: 61 PSLAAMMLP 69